Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,595,908 T→C Q355R (CAG→CGG)  mdoB ← phosphoglycerol transferase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,595,9080TC99.7% 1235.9 / ‑5.2 355Q355R (CAG→CGG) mdoBphosphoglycerol transferase I
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (172/182);  minor base A (0/1);  total (172/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.03e-01

Only 100 of 363 total aligned reads displayed.

ATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC  >  NC_000913/4595818‑4595997
                                                                                          |                                                                                         
aTCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCgg                                                                                         >  1:2562861/1‑93 (MQ=255)
 tCGCTAAATGGTCAGAAGAGACGACTATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc                                                                                        <  1:4529610/93‑1 (MQ=255)
 tCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc                                                                                        <  1:468509/93‑1 (MQ=255)
    cTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGc                                                                                     >  1:2069430/1‑93 (MQ=255)
      aaaTGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCaa                                                                                   <  1:1534649/93‑1 (MQ=255)
           gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAc                                                                              <  1:1358058/93‑1 (MQ=255)
            tCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAcc                                                                             <  1:3063257/93‑1 (MQ=255)
              agaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgc                                                                           >  2:6026616/1‑93 (MQ=255)
               gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgcg                                                                          >  2:3471389/1‑93 (MQ=255)
               gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgcg                                                                          >  2:5337745/1‑93 (MQ=255)
                    gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa                                                                     <  1:7133321/93‑1 (MQ=255)
                    gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa                                                                     <  2:6139703/93‑1 (MQ=255)
                      cgacgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATg                                                                   <  1:5221144/93‑1 (MQ=255)
                      cgacgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATg                                                                   >  2:5047674/1‑93 (MQ=255)
                       gacgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGa                                                                  <  1:8303242/93‑1 (MQ=255)
                        acgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAc                                                                 <  2:8664992/93‑1 (MQ=255)
                        aagaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAc                                                                 <  1:6183339/91‑1 (MQ=255)
                         cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt                                                                <  1:1054949/93‑1 (MQ=255)
                         cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt                                                                <  2:1261987/93‑1 (MQ=255)
                         cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt                                                                >  2:7918029/1‑93 (MQ=255)
                          gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTg                                                               >  2:4628487/1‑93 (MQ=255)
                          gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTg                                                               >  1:490426/1‑93 (MQ=255)
                           aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTgt                                                              >  1:1908651/1‑92 (MQ=255)
                           aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa                                                              <  2:4421727/93‑1 (MQ=255)
                           aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa                                                              >  1:6329922/1‑93 (MQ=255)
                           aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa                                                              >  1:1219092/1‑93 (MQ=255)
                            tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAt                                                             <  2:695401/93‑1 (MQ=255)
                             gACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAtt                                                            <  1:5691726/93‑1 (MQ=255)
                              aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc                                                           <  2:256393/93‑1 (MQ=255)
                               cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCg                                                          >  1:5548368/1‑93 (MQ=255)
                               cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCg                                                          <  2:5560685/93‑1 (MQ=255)
                               cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCg                                                          <  1:2741391/93‑1 (MQ=255)
                                ggTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCgg                                                         >  1:3852950/1‑93 (MQ=255)
                                ggTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGATGCAACTTACCGCGCTGCATGACTGATTCgt                                                         >  1:7648565/1‑92 (MQ=255)
                                 gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt                                                        >  1:6208914/1‑93 (MQ=255)
                                  tATCTTTAAACCACTGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGtt                                                       <  1:6097850/93‑1 (MQ=255)
                                  tATCTTTAAACCACGGTGACGCTTTCATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCATCTTACCGCTCTGAATGACTGATTCGGtt                                                       <  2:4676122/93‑1 (MQ=255)
                                    tCTTTAACCCACGGTGACGCTTTGATTTTGTTGATAAACGTGGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTa                                                     <  2:8023603/93‑1 (MQ=255)
                                     cTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAc                                                    <  2:2054684/93‑1 (MQ=255)
                                     cTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAc                                                    <  2:3787443/93‑1 (MQ=255)
                                      tttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAcc                                                   <  1:3956219/93‑1 (MQ=255)
                                      tttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAcc                                                   >  1:7572143/1‑93 (MQ=255)
                                        tAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGt                                                 >  2:8237898/1‑93 (MQ=255)
                                         aaaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTc                                                <  1:144067/93‑1 (MQ=255)
                                          aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa                                               >  1:7029936/1‑93 (MQ=255)
                                            ccACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCaaa                                             >  2:1447240/1‑93 (MQ=255)
                                             cACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCaaaa                                            <  1:729275/93‑1 (MQ=255)
                                             cACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCaaaa                                            >  2:1625220/1‑93 (MQ=255)
                                               cGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATc                                          <  1:8157017/93‑1 (MQ=255)
                                                ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa                                         <  2:2534994/93‑1 (MQ=255)
                                                  tGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCata                                       <  2:2971157/93‑1 (MQ=255)
                                                   gACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCatat                                      <  2:4886304/93‑1 (MQ=255)
                                                    aCGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtt                                     <  2:1044973/93‑1 (MQ=255)
                                                    aCGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtt                                     <  1:5003351/93‑1 (MQ=255)
                                                    aCGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtt                                     >  2:3193912/1‑93 (MQ=255)
                                                      gCTTTGGTTTTGTTGATAAACGTAGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttt                                   <  2:4737503/93‑1 (MQ=255)
                                                      gCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttt                                   >  1:5924308/1‑93 (MQ=255)
                                                      gCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttt                                   <  1:2521118/93‑1 (MQ=255)
                                                       cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt                                  >  2:4987249/1‑93 (MQ=255)
                                                        tttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttttt                                 >  1:290467/1‑93 (MQ=255)
                                                          tGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGc                               <  1:2264030/93‑1 (MQ=255)
                                                           gATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCg                              >  2:7659741/1‑93 (MQ=255)
                                                           gATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCg                              >  1:175889/1‑93 (MQ=255)
                                                            aTTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCgg                             >  2:7490382/1‑93 (MQ=255)
                                                             ttttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGt                            <  2:3095832/93‑1 (MQ=255)
                                                             ttttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGt                            <  1:4620164/93‑1 (MQ=255)
                                                                tgttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAc                         >  1:3650548/1‑93 (MQ=255)
                                                                tgttgATAAAAGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAc                         <  2:7946963/93‑1 (MQ=255)
                                                                 gttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACa                        <  1:2381477/93‑1 (MQ=255)
                                                                 gttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACa                        <  2:5656638/93‑1 (MQ=255)
                                                                    gATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGt                     <  1:7490822/93‑1 (MQ=255)
                                                                     aTAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTa                    >  1:5060976/1‑93 (MQ=255)
                                                                       aaaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACg                  <  2:3824201/93‑1 (MQ=255)
                                                                       aaaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACg                  <  2:7752355/93‑1 (MQ=255)
                                                                        aaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACga                 >  2:2422799/1‑93 (MQ=255)
                                                                         aCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGAGGTTACAGGTACgag                >  1:3286422/1‑93 (MQ=255)
                                                                          cGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgaga               <  1:4175012/93‑1 (MQ=255)
                                                                           gTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag              >  1:889469/1‑93 (MQ=255)
                                                                            tCGCGATGGTCTGCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagaga             <  1:3711315/93‑1 (MQ=255)
                                                                              gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa           >  2:2344978/1‑93 (MQ=255)
                                                                              gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa           >  1:5424501/1‑93 (MQ=255)
                                                                               cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa          <  1:8704389/93‑1 (MQ=255)
                                                                               cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa          >  2:2792889/1‑93 (MQ=255)
                                                                               cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa          <  2:7533740/93‑1 (MQ=255)
                                                                               cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa          >  2:6488167/1‑93 (MQ=255)
                                                                               cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa          >  2:5873428/1‑93 (MQ=255)
                                                                                gATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaa         <  2:8122223/93‑1 (MQ=255)
                                                                                gATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaa         <  2:2670161/93‑1 (MQ=255)
                                                                                 aTGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaac        >  1:8064939/1‑92 (MQ=255)
                                                                                 aTGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaaa        >  1:6309453/1‑93 (MQ=255)
                                                                                  tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc       >  2:3913528/1‑93 (MQ=255)
                                                                                  tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc       <  2:4188292/93‑1 (MQ=255)
                                                                                   gTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAcc      <  2:1772213/93‑1 (MQ=255)
                                                                                    ttCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCa     <  2:671192/93‑1 (MQ=255)
                                                                                    ttCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCa     <  2:3694424/93‑1 (MQ=255)
                                                                                    gtctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCa     <  2:7283591/92‑1 (MQ=255)
                                                                                     tctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAt    <  1:6846344/93‑1 (MQ=255)
                                                                                      ctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATc   <  2:2199244/93‑1 (MQ=255)
                                                                                      ctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATc   <  1:6700750/93‑1 (MQ=255)
                                                                                       tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc  >  2:481012/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC  >  NC_000913/4595818‑4595997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG  >  NC_000913/4595815‑4595998
                                                                                             |                                                                                          
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCC                                                                                            >  SRR4302541.8032841/1‑94 (MQ=60)
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCC                                                                                            <  SRR4302541.1235200/94‑1 (MQ=60)
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCC                                                                                            <  SRR4302541.7450447/94‑1 (MQ=60)
 TCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCG                                                                                           >  SRR4302541.691327/1‑94 (MQ=60)
  CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG                                                                                          >  SRR4302541.2588546/1‑94 (MQ=60)
  CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG                                                                                          >  SRR4302541.8901367/1‑94 (MQ=60)
  CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG                                                                                          <  SRR4302541.2611445/94‑1 (MQ=60)
    TCGCTAAATGGTCAGAAGAGACGACTATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT                                                                                        <  SRR4302541.4575345/94‑1 (MQ=60)
    TCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT                                                                                        <  SRR4302541.472969/94‑1 (MQ=60)
     CGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTG                                                                                       >  SRR4302541.3065120/1‑94 (MQ=60)
     CGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTG                                                                                       <  SRR4302541.7193898/94‑1 (MQ=60)
      GCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGC                                                                                      >  SRR4302541.2089429/1‑94 (MQ=60)
       CTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCA                                                                                     >  SRR4302541.3418617/1‑94 (MQ=60)
       CTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTCGATAAACGTCGCGATGTTCTCCCGGCTGCA                                                                                     >  SRR4302541.5712401/1‑94 (MQ=60)
       CTAAATGGTCAGAAGAGACGAAGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCA                                                                                     >  SRR4302541.4052872/1‑94 (MQ=60)
        TAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAA                                                                                    >  SRR4302541.6942517/1‑94 (MQ=60)
         AAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAAC                                                                                   <  SRR4302541.1550050/94‑1 (MQ=60)
         AAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAAC                                                                                   <  SRR4302541.3142396/94‑1 (MQ=60)
         AAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAAC                                                                                   >  SRR4302541.940230/1‑94 (MQ=60)
          AATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACT                                                                                  <  SRR4302541.3451975/94‑1 (MQ=60)
           ATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTT                                                                                 <  SRR4302541.3762301/94‑1 (MQ=60)
           ATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTT                                                                                 >  SRR4302541.626548/1‑94 (MQ=60)
             GGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAC                                                                               >  SRR4302541.5917740/1‑94 (MQ=60)
              GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC                                                                              <  SRR4302541.5099688/94‑1 (MQ=60)
              GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC                                                                              >  SRR4302541.6358618/1‑94 (MQ=60)
              GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC                                                                              <  SRR4302541.1371469/94‑1 (MQ=60)
              GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC                                                                              <  SRR4302541.2143760/94‑1 (MQ=60)
               TCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCG                                                                             <  SRR4302541.3094305/94‑1 (MQ=60)
                 AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG                                                                           >  SRR4302541.6255576/1‑94 (MQ=60)
                 AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG                                                                           <  SRR4302541.8189858/94‑1 (MQ=60)
                 AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG                                                                           >  SRR4302541.7119133/1‑94 (MQ=60)
                   AAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCT                                                                         >  SRR4302541.7698953/1‑94 (MQ=60)
                    AGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTG                                                                        >  SRR4302541.7776800/1‑94 (MQ=60)
                     GAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAACGCGCTGA                                                                       >  SRR4302541.8362774/1‑94 (MQ=60)
                       GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT                                                                     <  SRR4302541.7209334/94‑1 (MQ=60)
                       GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT                                                                     <  SRR4302541.247203/94‑1 (MQ=60)
                        ACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATG                                                                    <  SRR4302541.4822214/94‑1 (MQ=60)
                         CGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGA                                                                   <  SRR4302541.5274951/94‑1 (MQ=60)
                         CGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGA                                                                   >  SRR4302541.7629735/1‑94 (MQ=60)
                          GACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC                                                                  <  SRR4302541.1405779/94‑1 (MQ=60)
                          GACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC                                                                  <  SRR4302541.8393515/94‑1 (MQ=60)
                           ACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACT                                                                 >  SRR4302541.4968826/1‑94 (MQ=60)
                           ACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACT                                                                 <  SRR4302541.6246511/94‑1 (MQ=60)
                           AAGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACT                                                                 <  SRR4302541.6246510/94‑1 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                <  SRR4302541.2012783/94‑1 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                <  SRR4302541.1064750/94‑1 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                >  SRR4302541.495064/1‑94 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                <  SRR4302541.2115530/94‑1 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                >  SRR4302541.1276055/1‑94 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                <  SRR4302541.5565893/94‑1 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                >  SRR4302541.3168138/1‑94 (MQ=60)
                            CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG                                                                <  SRR4302541.282077/94‑1 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGT                                                               >  SRR4302541.1927000/1‑94 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA                                                               >  SRR4302541.6118319/1‑94 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA                                                               >  SRR4302541.1172263/1‑94 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA                                                               >  SRR4302541.6394634/1‑94 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA                                                               >  SRR4302541.6118320/1‑94 (MQ=60)
                             GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA                                                               >  SRR4302541.1231013/1‑94 (MQ=60)
                               TGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATT                                                             <  SRR4302541.88115/94‑1 (MQ=60)
                               TGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATT                                                             <  SRR4302541.4265132/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            <  SRR4302541.4313592/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            <  SRR4302541.5768465/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            <  SRR4302541.5088075/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            <  SRR4302541.5749786/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            <  SRR4302541.2488263/94‑1 (MQ=60)
                                GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC                                                            >  SRR4302541.6793909/1‑94 (MQ=60)
                                 ACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCG                                                           >  SRR4302541.5605174/1‑94 (MQ=60)
                                  CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG                                                          <  SRR4302541.2768886/94‑1 (MQ=60)
                                  CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG                                                          >  SRR4302541.3891726/1‑94 (MQ=60)
                                  CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGATGCAACTTACCGCGCTGCATGACTGATTCGT                                                          >  SRR4302541.7730069/1‑94 (MQ=60)
                                   GGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTGCCGGCTGCAACTTACCGCGCTGAATGACTGATTCact                                                         >  SRR4302541.4818141/1‑91 (MQ=60)
                                   GGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGT                                                         >  SRR4302541.6272369/1‑94 (MQ=60)
                                   GGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGT                                                         >  SRR4302541.1652049/1‑94 (MQ=60)
                                   GGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGT                                                         >  SRR4302541.5130543/1‑94 (MQ=60)
                                    GTATCTTTAAACCACTGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT                                                        >  SRR4302541.1480319/1‑94 (MQ=60)
                                    GTATCTTTAAACCACTGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT                                                        >  SRR4302541.1480321/1‑94 (MQ=60)
                                    GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT                                                        <  SRR4302541.3747452/94‑1 (MQ=60)
                                     TATCTTTAAACCACTGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT                                                       <  SRR4302541.6160106/94‑1 (MQ=60)
                                     AATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT                                                       <  SRR4302541.6664296/94‑1 (MQ=60)
                                      ATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTA                                                      <  SRR4302541.1103126/94‑1 (MQ=60)
                                       TCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAC                                                     <  SRR4302541.8512385/94‑1 (MQ=60)
                                        CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC                                                    <  SRR4302541.2677199/94‑1 (MQ=60)
                                        CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC                                                    >  SRR4302541.848851/1‑94 (MQ=60)
                                        CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC                                                    >  SRR4302541.745122/1‑94 (MQ=60)
                                        CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC                                                    >  SRR4302541.7653060/1‑94 (MQ=60)
                                         TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG                                                   <  SRR4302541.5705864/94‑1 (MQ=60)
                                         TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG                                                   <  SRR4302541.3995536/94‑1 (MQ=60)
                                         TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG                                                   <  SRR4302541.1727380/94‑1 (MQ=60)
                                          TTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGT                                                  >  SRR4302541.4556529/1‑94 (MQ=60)
                                          TTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGT                                                  >  SRR4302541.346653/1‑94 (MQ=60)
                                           TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC                                                 <  SRR4302541.8236371/94‑1 (MQ=60)
                                           TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC                                                 <  SRR4302541.4098797/94‑1 (MQ=60)
                                           TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC                                                 >  SRR4302541.3928931/1‑94 (MQ=60)
                                            AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA                                                >  SRR4302541.7104678/1‑94 (MQ=60)
                                            AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA                                                <  SRR4302541.145173/94‑1 (MQ=60)
                                            AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA                                                >  SRR4302541.3286340/1‑94 (MQ=60)
                                              ACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAA                                              <  SRR4302541.1391074/94‑1 (MQ=60)
                                              ACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAA                                              <  SRR4302541.7956701/94‑1 (MQ=60)
                                               actCGGTGACGCTATAATTTTGTTGATTATCGTCGTGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACGGATTCGGTTTACCGTCAAAA                                             <  SRR4302541.2964239/91‑1 (MQ=60)
                                               CCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAA                                             >  SRR4302541.2522471/1‑94 (MQ=60)
                                                CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGGTGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT                                            >  SRR4302541.1534202/1‑94 (MQ=60)
                                                CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT                                            >  SRR4302541.230011/1‑94 (MQ=60)
                                                CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT                                            <  SRR4302541.736190/94‑1 (MQ=60)
                                                 ACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATC                                           <  SRR4302541.3794655/94‑1 (MQ=60)
                                                 ACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATC                                           <  SRR4302541.7911408/94‑1 (MQ=60)
                                                  CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCA                                          <  SRR4302541.8246159/94‑1 (MQ=60)
                                                  CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCA                                          <  SRR4302541.4638675/94‑1 (MQ=60)
                                                   GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT                                         <  SRR4302541.4145819/94‑1 (MQ=60)
                                                   GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT                                         <  SRR4302541.7328997/94‑1 (MQ=60)
                                                     TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT                                       >  SRR4302541.6177971/1‑94 (MQ=60)
                                                     TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT                                       <  SRR4302541.7584659/94‑1 (MQ=60)
                                                     TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT                                       <  SRR4302541.2555955/94‑1 (MQ=60)
                                                       ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT                                     >  SRR4302541.5500967/1‑94 (MQ=60)
                                                       ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT                                     <  SRR4302541.5054763/94‑1 (MQ=60)
                                                       ACGCTTTGATGTTGTCGATAAACGTCGCGATGCTCTCCCGGCTGCAACTGACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT                                     <  SRR4302541.5054764/94‑1 (MQ=60)
                                                        CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT                                    >  SRR4302541.5984634/1‑94 (MQ=60)
                                                        CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT                                    >  SRR4302541.5984635/1‑94 (MQ=60)
                                                        CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT                                    >  SRR4302541.1930224/1‑94 (MQ=60)
                                                         GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT                                   <  SRR4302541.5264650/94‑1 (MQ=60)
                                                         GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT                                   <  SRR4302541.2546488/94‑1 (MQ=60)
                                                          CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT                                  >  SRR4302541.37502/1‑94 (MQ=60)
                                                          CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT                                  >  SRR4302541.292979/1‑94 (MQ=60)
                                                           TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG                                 <  SRR4302541.190329/94‑1 (MQ=60)
                                                           TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG                                 >  SRR4302541.4633592/1‑94 (MQ=60)
                                                           TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG                                 <  SRR4302541.7054426/94‑1 (MQ=60)
                                                           TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG                                 >  SRR4302541.2611412/1‑94 (MQ=60)
                                                             TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG                               >  SRR4302541.177217/1‑94 (MQ=60)
                                                             TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG                               <  SRR4302541.2285895/94‑1 (MQ=60)
                                                              GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG                              >  SRR4302541.4667514/1‑94 (MQ=60)
                                                              GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG                              >  SRR4302541.5261123/1‑94 (MQ=60)
                                                              GATTTTGTTGATAAAAGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG                              >  SRR4302541.8278387/1‑94 (MQ=60)
                                                               gtttttttgataaaactctCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGT                             <  SRR4302541.2349260/75‑1 (MQ=60)
                                                               ATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGT                             >  SRR4302541.7396360/1‑94 (MQ=60)
                                                                TTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTT                            <  SRR4302541.4667128/94‑1 (MQ=60)
                                                                TTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTT                            <  SRR4302541.3717591/94‑1 (MQ=60)
                                                                 TTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTA                           >  SRR4302541.1355452/1‑94 (MQ=60)
                                                                  TTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAC                          >  SRR4302541.3687582/1‑94 (MQ=60)
                                                                  TTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAC                          >  SRR4302541.2821804/1‑94 (MQ=60)
                                                                  TTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAC                          <  SRR4302541.2688010/94‑1 (MQ=60)
                                                                    GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG                        <  SRR4302541.2932438/94‑1 (MQ=60)
                                                                    GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG                        <  SRR4302541.2404756/94‑1 (MQ=60)
                                                                    GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG                        <  SRR4302541.2582568/94‑1 (MQ=60)
                                                                    GTTGATAAACGTCGCGATATTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG                        <  SRR4302541.1634217/94‑1 (MQ=60)
                                                                     TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAGCGCGCTGAATGACTGGTTCGGTTTACCGTCAAAATCATATTTTTTTCGGTTACACG                       >  SRR4302541.2003114/1‑94 (MQ=60)
                                                                      TGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGT                      <  SRR4302541.1244128/94‑1 (MQ=60)
                                                                      TGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGT                      <  SRR4302541.2125587/94‑1 (MQ=60)
                                                                      TGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGT                      >  SRR4302541.7694504/1‑94 (MQ=60)
                                                                       GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA                     <  SRR4302541.7380706/94‑1 (MQ=60)
                                                                       GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA                     <  SRR4302541.7570932/94‑1 (MQ=60)
                                                                       GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA                     >  SRR4302541.5113023/1‑94 (MQ=60)
                                                                       GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA                     <  SRR4302541.1908994/94‑1 (MQ=60)
                                                                        ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC                    <  SRR4302541.5756611/94‑1 (MQ=60)
                                                                        ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC                    <  SRR4302541.467488/94‑1 (MQ=60)
                                                                        ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC                    >  SRR4302541.951083/1‑94 (MQ=60)
                                                                        ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC                    <  SRR4302541.6766995/94‑1 (MQ=60)
                                                                         TAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACG                   <  SRR4302541.6798881/94‑1 (MQ=60)
                                                                          AAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGA                  >  SRR4302541.6227810/1‑94 (MQ=60)
                                                                           AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAG                 >  SRR4302541.6994826/1‑94 (MQ=60)
                                                                           AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAG                 <  SRR4302541.4763471/94‑1 (MQ=60)
                                                                           AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGAGGTTACAGGTACGAG                 >  SRR4302541.3319532/1‑94 (MQ=60)
                                                                            ACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGA                <  SRR4302541.4728854/94‑1 (MQ=60)
                                                                             CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG               >  SRR4302541.897629/1‑94 (MQ=60)
                                                                             CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG               <  SRR4302541.4216418/94‑1 (MQ=60)
                                                                             CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG               >  SRR4302541.8558438/1‑94 (MQ=60)
                                                                               TCGCGATGGTCTGCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGAT             <  SRR4302541.3748764/94‑1 (MQ=60)
                                                                                CGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA            >  SRR4302541.5480161/1‑94 (MQ=60)
                                                                                CGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA            >  SRR4302541.6389943/1‑94 (MQ=60)
                                                                                  CGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAA          <  SRR4302541.8797521/94‑1 (MQ=60)
                                                                                   GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAC         >  SRR4302541.8153519/1‑94 (MQ=60)
                                                                                   GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA         >  SRR4302541.6373951/1‑94 (MQ=60)
                                                                                   GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA         >  SRR4302541.6373952/1‑94 (MQ=60)
                                                                                   GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA         >  SRR4302541.8338906/1‑94 (MQ=60)
                                                                                   GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA         >  SRR4302541.722163/1‑94 (MQ=60)
                                                                                    ATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAC        >  SRR4302541.3931175/1‑94 (MQ=60)
                                                                                    ATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAC        >  SRR4302541.5556525/1‑94 (MQ=60)
                                                                                     TGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACC       <  SRR4302541.6300488/94‑1 (MQ=60)
                                                                                      GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA      <  SRR4302541.5433968/94‑1 (MQ=60)
                                                                                      GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA      >  SRR4302541.7168835/1‑94 (MQ=60)
                                                                                       TTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAT     <  SRR4302541.5024161/94‑1 (MQ=60)
                                                                                        TCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATC    <  SRR4302541.6919542/94‑1 (MQ=60)
                                                                                        TCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATC    <  SRR4302541.2974412/94‑1 (MQ=60)
                                                                                        TCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATC    >  SRR4302541.908118/1‑94 (MQ=60)
                                                                                        TCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATC    <  SRR4302541.7648403/94‑1 (MQ=60)
                                                                                         CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC   <  SRR4302541.5290377/94‑1 (MQ=60)
                                                                                         CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC   <  SRR4302541.6770932/94‑1 (MQ=60)
                                                                                          TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG  <  SRR4302541.6295261/94‑1 (MQ=60)
                                                                                          TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG  >  SRR4302541.5851526/1‑94 (MQ=60)
                                                                                          TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG  >  SRR4302541.878932/1‑94 (MQ=60)
                                                                                             |                                                                                          
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG  >  NC_000913/4595815‑4595998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: