Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,595,908 |
T→C |
Q355R (CAG→CGG) |
mdoB ← |
phosphoglycerol transferase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,595,908 | 0 | T | C | 100.0%
| 890.7
/ NA
| 254 | Q355R (CAG→CGG) | mdoB | phosphoglycerol transferase I |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (122/132); total (122/132) |
Only 100 of 256 total aligned reads displayed.
ATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC > NC_000913/4595818‑4595997
|
tCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc < 1:3865218/93‑1 (MQ=255)
tCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc > 2:788874/1‑93 (MQ=255)
aaaTGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCaa > 1:3435969/1‑93 (MQ=255)
aaTGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAAc < 1:5000035/93‑1 (MQ=255)
gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAc > 2:1676401/1‑93 (MQ=255)
cAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcg > 2:3492060/1‑93 (MQ=255)
agaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgc < 2:1923042/93‑1 (MQ=255)
gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgcg > 2:181226/1‑93 (MQ=255)
gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgcg > 2:3215698/1‑93 (MQ=255)
aagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCgcgc < 1:5228909/93‑1 (MQ=255)
aagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCACCCGGCTGCAACTTACCgcgc < 2:6417852/93‑1 (MQ=255)
agaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGa < 1:1554508/93‑1 (MQ=255)
gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa < 1:5677642/93‑1 (MQ=255)
gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa < 1:287744/93‑1 (MQ=255)
gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa > 2:5361883/1‑93 (MQ=255)
acgacgATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAt < 2:2151180/93‑1 (MQ=255)
acgacgATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAt > 2:2284582/1‑93 (MQ=255)
acgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAc > 1:1713514/1‑93 (MQ=255)
cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt < 2:3924341/93‑1 (MQ=255)
cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt < 1:3600226/93‑1 (MQ=255)
gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTg > 2:1364250/1‑93 (MQ=255)
aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa > 1:4037706/1‑93 (MQ=255)
aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa < 1:2314742/93‑1 (MQ=255)
tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAt < 2:4345546/93‑1 (MQ=255)
gACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAtt < 1:5328242/93‑1 (MQ=255)
gACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAtt < 1:500648/93‑1 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc > 1:5784161/1‑93 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc < 2:5158852/93‑1 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc < 2:5518269/93‑1 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTATTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc > 1:2010583/1‑93 (MQ=255)
cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCg < 1:2586788/93‑1 (MQ=255)
gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt < 1:1585211/93‑1 (MQ=255)
gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt < 1:3993441/93‑1 (MQ=255)
gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt > 2:1188181/1‑93 (MQ=255)
tATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGtt < 1:881322/93‑1 (MQ=255)
tATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGtt < 1:2131809/93‑1 (MQ=255)
cTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAc < 2:2019741/93‑1 (MQ=255)
tttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAcc < 1:1113301/93‑1 (MQ=255)
aaaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTc < 2:1655896/93‑1 (MQ=255)
aaaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTc > 1:3310161/1‑93 (MQ=255)
aaaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTc < 2:2815402/93‑1 (MQ=255)
aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa > 2:1267891/1‑93 (MQ=255)
aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa > 1:6089645/1‑93 (MQ=255)
aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa > 2:4038619/1‑93 (MQ=255)
aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa > 1:3114508/1‑93 (MQ=255)
cACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCaaaa < 1:5122043/93‑1 (MQ=255)
aCGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAt > 1:2263204/1‑93 (MQ=255)
ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa < 2:5777451/93‑1 (MQ=255)
ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa > 2:4029072/1‑93 (MQ=255)
ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa > 2:1220814/1‑93 (MQ=255)
ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa < 2:656023/93‑1 (MQ=255)
gTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCat < 2:4679505/93‑1 (MQ=255)
tGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCata < 1:4202828/93‑1 (MQ=255)
tGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCata < 1:4061259/93‑1 (MQ=255)
gACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCatat > 2:5092527/1‑93 (MQ=255)
gACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCatat < 2:3821311/93‑1 (MQ=255)
cGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttt > 1:1063369/1‑93 (MQ=255)
gCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttt > 1:1210846/1‑93 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt < 1:2956503/93‑1 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt < 2:3569010/93‑1 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt < 1:618734/93‑1 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt > 1:6340499/1‑93 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt > 1:3731074/1‑93 (MQ=255)
tttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttttt > 1:1254028/1‑93 (MQ=255)
tGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGc < 2:623996/93‑1 (MQ=255)
aTTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCgg > 1:1520497/1‑93 (MQ=255)
ttttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGt < 2:505058/93‑1 (MQ=255)
tttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGtt < 2:6071246/93‑1 (MQ=255)
tttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGtt > 2:4215062/1‑93 (MQ=255)
ttgttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTa < 1:2705110/93‑1 (MQ=255)
tgttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAc < 2:3648558/93‑1 (MQ=255)
gttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACa > 2:3192911/1‑93 (MQ=255)
gttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACa < 1:660543/93‑1 (MQ=255)
ttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAg < 1:2529932/93‑1 (MQ=255)
ttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAg > 1:5373830/1‑93 (MQ=255)
gATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGt > 2:1471053/1‑93 (MQ=255)
gATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGt > 2:3301498/1‑93 (MQ=255)
aTAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTa > 1:4847412/1‑93 (MQ=255)
aTAAACGTCGCGATGTGCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTa < 2:3785501/93‑1 (MQ=255)
tAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACATGTAc > 1:2387322/1‑93 (MQ=255)
tAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAc > 2:5895968/1‑93 (MQ=255)
aaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACga < 2:6170307/93‑1 (MQ=255)
aCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgag > 2:5576244/1‑93 (MQ=255)
aCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgag > 2:2042580/1‑93 (MQ=255)
cGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgaga < 1:1785610/93‑1 (MQ=255)
gTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag > 2:4387979/1‑93 (MQ=255)
ctCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag < 2:1599331/92‑1 (MQ=255)
gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa < 1:4546570/93‑1 (MQ=255)
aTGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaaa > 2:86529/1‑93 (MQ=255)
tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc > 1:904470/1‑93 (MQ=255)
tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc < 2:24509/93‑1 (MQ=255)
tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc < 1:2758005/93‑1 (MQ=255)
tGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAc > 1:1960178/1‑93 (MQ=255)
gTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAcc > 2:976065/1‑93 (MQ=255)
gTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAAAGGTACGAGAGGTAAAAcc > 1:3626077/1‑93 (MQ=255)
tctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAt > 2:4107722/1‑93 (MQ=255)
tctcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAt < 2:3039754/93‑1 (MQ=255)
tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc < 1:5576263/93‑1 (MQ=255)
tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc < 1:4678258/93‑1 (MQ=255)
tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc > 1:2523072/1‑93 (MQ=255)
|
ATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC > NC_000913/4595818‑4595997
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT > NC_000913/4595817‑4596001
|
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG > SRR4302534.542525/1‑94 (MQ=60)
tcccaAAATGGTCAGAAGATACGACAATGACGGTATCTTTAAACCACGGTGACCCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT < SRR4302534.4291401/89‑1 (MQ=60)
TCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT < SRR4302534.3968993/94‑1 (MQ=60)
GATAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGC < SRR4302534.1543234/94‑1 (MQ=60)
CTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCA > SRR4302534.2262306/1‑94 (MQ=60)
CTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCA < SRR4302534.6086052/94‑1 (MQ=60)
TAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAA > SRR4302534.2925678/1‑94 (MQ=60)
TAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAA > SRR4302534.3528308/1‑94 (MQ=60)
AAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAAC > SRR4302534.5140015/1‑94 (MQ=60)
AATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACT < SRR4302534.5135221/94‑1 (MQ=60)
AATGGTCAGAAGAGACGACGATCACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCTACT > SRR4302534.2516774/1‑94 (MQ=60)
ATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTT < SRR4302534.1830744/94‑1 (MQ=60)
TGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTA < SRR4302534.6394188/94‑1 (MQ=60)
GGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAC < SRR4302534.5010829/94‑1 (MQ=60)
TCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCG > SRR4302534.804335/1‑94 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG > SRR4302534.4895700/1‑94 (MQ=60)
GAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGC > SRR4302534.5147748/1‑94 (MQ=60)
AAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCT < SRR4302534.5370073/94‑1 (MQ=60)
AGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAA > SRR4302534.398612/1‑94 (MQ=60)
AGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAA < SRR4302534.1595217/94‑1 (MQ=60)
AGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAA > SRR4302534.3492372/1‑94 (MQ=60)
GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT < SRR4302534.295180/94‑1 (MQ=60)
GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT < SRR4302534.5831358/94‑1 (MQ=60)
ACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATG > SRR4302534.1685319/1‑94 (MQ=60)
ACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATG > SRR4302534.3974398/1‑94 (MQ=60)
GACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC > SRR4302534.1758027/1‑94 (MQ=60)
GACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC > SRR4302534.1601018/1‑94 (MQ=60)
CACGATGACGGTATCTTTAACCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC < SRR4302534.2390234/94‑1 (MQ=60)
ACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACT > SRR4302534.1597930/1‑94 (MQ=60)
CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG < SRR4302534.259016/94‑1 (MQ=60)
CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG < SRR4302534.3697051/94‑1 (MQ=60)
GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA > SRR4302534.2823167/1‑94 (MQ=60)
GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA > SRR4302534.4145963/1‑94 (MQ=60)
ATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAT < SRR4302534.2376166/94‑1 (MQ=60)
ATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAT < SRR4302534.5686147/94‑1 (MQ=60)
TGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATT < SRR4302534.2469632/94‑1 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC < SRR4302534.513119/94‑1 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC < SRR4302534.5471948/94‑1 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC > SRR4302534.5941056/1‑94 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC > SRR4302534.2701264/1‑94 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTATTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC > SRR4302534.2063183/1‑94 (MQ=60)
CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG < SRR4302534.2655266/94‑1 (MQ=60)
CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG > SRR4302534.2731584/1‑94 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT < SRR4302534.4146438/94‑1 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT < SRR4302534.1626678/94‑1 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT < SRR4302534.4100341/94‑1 (MQ=60)
TATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT < SRR4302534.1774369/94‑1 (MQ=60)
TATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT < SRR4302534.903604/94‑1 (MQ=60)
TATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT < SRR4302534.2187975/94‑1 (MQ=60)
ATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTA < SRR4302534.3303143/94‑1 (MQ=60)
TCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAC < SRR4302534.6528629/94‑1 (MQ=60)
TCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAC > SRR4302534.1866256/1‑94 (MQ=60)
TCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAC > SRR4302534.2368129/1‑94 (MQ=60)
CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC < SRR4302534.2602091/94‑1 (MQ=60)
TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG < SRR4302534.1142362/94‑1 (MQ=60)
TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC > SRR4302534.209298/1‑94 (MQ=60)
TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC > SRR4302534.3398562/1‑94 (MQ=60)
AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA > SRR4302534.3196417/1‑94 (MQ=60)
AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA > SRR4302534.6255252/1‑94 (MQ=60)
AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA > SRR4302534.6376769/1‑94 (MQ=60)
ACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAA > SRR4302534.3848778/1‑94 (MQ=60)
CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT < SRR4302534.5260348/94‑1 (MQ=60)
CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT > SRR4302534.3429494/1‑94 (MQ=60)
CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT > SRR4302534.2323222/1‑94 (MQ=60)
ACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATC < SRR4302534.91855/94‑1 (MQ=60)
CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACTGCGCTGAATGACTGAATCGGTCTACCGTCAAAATCA > SRR4302534.3652551/1‑94 (MQ=60)
CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCA > SRR4302534.5625900/1‑94 (MQ=60)
GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT > SRR4302534.5062197/1‑94 (MQ=60)
GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT > SRR4302534.3717310/1‑94 (MQ=60)
GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT > SRR4302534.5841133/1‑94 (MQ=60)
TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT < SRR4302534.4170202/94‑1 (MQ=60)
TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT < SRR4302534.4316297/94‑1 (MQ=60)
TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT < SRR4302534.2938826/94‑1 (MQ=60)
GACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATT > SRR4302534.5491642/1‑94 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT > SRR4302534.1090931/1‑94 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT < SRR4302534.6121626/94‑1 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT < SRR4302534.232518/94‑1 (MQ=60)
CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT < SRR4302534.3773658/94‑1 (MQ=60)
CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT > SRR4302534.1242705/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT < SRR4302534.4118242/94‑1 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302534.1234121/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302534.6511752/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT < SRR4302534.5455335/94‑1 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT < SRR4302534.5317654/94‑1 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302534.3831328/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT > SRR4302534.1287080/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302534.3033990/94‑1 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302534.633759/94‑1 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG > SRR4302534.5784318/1‑94 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG < SRR4302534.4146492/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG > SRR4302534.1560425/1‑94 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302534.4712004/94‑1 (MQ=60)
TTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTA < SRR4302534.5803854/94‑1 (MQ=60)
TTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTA < SRR4302534.1297903/94‑1 (MQ=60)
TTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAC < SRR4302534.2776549/94‑1 (MQ=60)
TGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACA > SRR4302534.3820366/1‑94 (MQ=60)
GTTGATAATCTTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTGTACCGTCAAAATCATATTTTTTGCGGTTACAG < SRR4302534.4160798/94‑1 (MQ=60)
GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG < SRR4302534.676601/94‑1 (MQ=60)
GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG > SRR4302534.5518640/1‑94 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302534.2597053/94‑1 (MQ=60)
TGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGT > SRR4302534.114261/1‑94 (MQ=60)
GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA > SRR4302534.4978923/1‑94 (MQ=60)
GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA < SRR4302534.910623/94‑1 (MQ=60)
ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACATGTAC > SRR4302534.2450758/1‑94 (MQ=60)
TAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACG < SRR4302534.3079424/94‑1 (MQ=60)
TAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACG < SRR4302534.19668/94‑1 (MQ=60)
AAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGA > SRR4302534.5145732/1‑94 (MQ=60)
AAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGA > SRR4302534.1776829/1‑94 (MQ=60)
AGCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAG < SRR4302534.6282107/94‑1 (MQ=60)
AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAG < SRR4302534.156369/94‑1 (MQ=60)
ACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGA > SRR4302534.2011910/1‑94 (MQ=60)
CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG > SRR4302534.2989151/1‑94 (MQ=60)
CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG < SRR4302534.1831969/94‑1 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA < SRR4302534.2639471/94‑1 (MQ=60)
CGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA > SRR4302534.418572/1‑94 (MQ=60)
GCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAA < SRR4302534.3093286/94‑1 (MQ=60)
GCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAA > SRR4302534.4764488/1‑94 (MQ=60)
GCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAA < SRR4302534.4669829/94‑1 (MQ=60)
GCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAA < SRR4302534.3643134/94‑1 (MQ=60)
GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA > SRR4302534.1274524/1‑94 (MQ=60)
ATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAC > SRR4302534.927437/1‑94 (MQ=60)
ATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAC > SRR4302534.1190231/1‑94 (MQ=60)
ATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAC > SRR4302534.2011481/1‑94 (MQ=60)
TGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACC < SRR4302534.2830654/94‑1 (MQ=60)
TGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAAAGGTACGAGAGGTAAAACC > SRR4302534.3723548/1‑94 (MQ=60)
GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA > SRR4302534.810441/1‑94 (MQ=60)
TTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAT > SRR4302534.4374595/1‑94 (MQ=60)
CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC > SRR4302534.2590035/1‑94 (MQ=60)
CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC > SRR4302534.4655001/1‑94 (MQ=60)
TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG > SRR4302534.1370812/1‑94 (MQ=60)
TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG < SRR4302534.5726877/94‑1 (MQ=60)
TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG < SRR4302534.2138976/94‑1 (MQ=60)
TCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCG < SRR4302534.4805269/94‑1 (MQ=60)
CCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG > SRR4302534.910516/1‑94 (MQ=60)
CCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGG < SRR4302534.5756489/94‑1 (MQ=60)
CCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGCTACAGGTACGAGAGATAAAACCATCCGGG > SRR4302534.4207006/1‑94 (MQ=60)
CGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT < SRR4302534.4142702/94‑1 (MQ=60)
CGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT < SRR4302534.4806934/94‑1 (MQ=60)
CGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT < SRR4302534.5878813/94‑1 (MQ=60)
|
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT > NC_000913/4595817‑4596001
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
