Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGT > NC_000913/3742581‑3742767
|
GAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCC < SRR4302541.5577589/94‑1 (MQ=60)
GAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCC < SRR4302541.2902162/94‑1 (MQ=60)
GAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCC > SRR4302541.8023246/1‑94 (MQ=60)
agccaatgcCTTCTCCCTGCGGGCGATTCCGTGCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCG < SRR4302541.3271088/85‑1 (MQ=60)
AGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTG > SRR4302541.2561086/1‑94 (MQ=60)
AGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCG < SRR4302541.8512435/94‑1 (MQ=60)
AGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCG < SRR4302541.3271087/94‑1 (MQ=60)
CCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCC < SRR4302541.4798055/94‑1 (MQ=60)
CCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCC < SRR4302541.2173435/94‑1 (MQ=60)
CCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCC > SRR4302541.2517630/1‑94 (MQ=60)
CCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCC > SRR4302541.6595485/1‑94 (MQ=60)
CGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCG > SRR4302541.998892/1‑94 (MQ=60)
CGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCG < SRR4302541.3547463/94‑1 (MQ=60)
CGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCG > SRR4302541.3297841/1‑94 (MQ=60)
ATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGAT > SRR4302541.7512730/1‑94 (MQ=60)
ATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGAT > SRR4302541.3841211/1‑94 (MQ=60)
TAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑AGCATTGTTGACCTGCCGATG > SRR4302541.6196493/1‑94 (MQ=60)
AGCTTCTCCCGGCTGGCGATTCCGTTTTTGGTGCTGGCGGGT‑GAAATCATGAATGGGGGCGGTTTGTAAAAA‑CGCATTGTTGACCCGCCGATGA < SRR4302541.5100132/94‑1 (MQ=60)
GCTTCTCCCTGGTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTAAAAA‑CGCATTGTTGACCCGCCGATGAA < SRR4302541.7399410/94‑1 (MQ=60)
GCTTCCCCCTGCTGGCGATTCCGTTCTTTGTGCTGGGGGGT‑GAAATCATGAATGGGGGCGGTTTGTAAAAA‑CGCTTTGTTGCCCCGCCGATGAA < SRR4302541.4992311/94‑1 (MQ=60)
CTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGC‑GAAATCAAGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTTACCCGCCGATGAAA > SRR4302541.2414178/1‑94 (MQ=60)
TTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAAC > SRR4302541.6126958/1‑94 (MQ=60)
TTCTCCCTGCTGGCGATTCCGTTCTTGGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAAC < SRR4302541.8096258/94‑1 (MQ=60)
TCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGGGGGT‑GAAATCATGAATGCGGGCGGTTTGTAAAAC‑CGCTTTGTTGCCCCGCCGATGAAACT < SRR4302541.621052/94‑1 (MQ=60)
TCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACT < SRR4302541.7511581/94‑1 (MQ=60)
TCCCCCTGCTGGCGATTCCTTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTAAAAC‑CGCATTGTTGCCCCGCCGATGAAACT < SRR4302541.3161058/94‑1 (MQ=60)
CTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTG > SRR4302541.2808797/1‑94 (MQ=60)
CTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTG > SRR4302541.6807587/1‑94 (MQ=60)
CTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTG > SRR4302541.1802598/1‑94 (MQ=60)
TCCCTGCTGGCTATTCCGTTCTTTGTGCTGGCGGGG‑GAAATCATGAATGCGGGCGGCTTTTCAAAA‑CGAATTGTTGACCTGCCGATGAAACTGG < SRR4302541.7580443/94‑1 (MQ=60)
TCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGG > SRR4302541.1465290/1‑94 (MQ=60)
CCCCTGCTGGCGATTCCGTTTTTTGTGCTGGCGGGT‑GAAATCATGAAGGCGGGCGGCTTGTAAAAA‑CGCATTGTTGACCCGCCGATGAAACTGG < SRR4302541.7587040/94‑1 (MQ=60)
CCCCTGCGGGCGTTTCCGTTCTTTGTGCGGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGG < SRR4302541.872090/94‑1 (MQ=60)
cctgcgggtgattctttttTTTGTGCGGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTAAAAA‑CCCATTGTTGCCCCGCCGATGAAACTGGTG < SRR4302541.3048270/75‑1 (MQ=60)
CCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GGAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTG > SRR4302541.8447456/1‑94 (MQ=60)
CTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGG‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CCCATTTTTGACCCGCCGATGAAACTGGTGG > SRR4302541.586600/1‑94 (MQ=60)
CGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGG < SRR4302541.968805/94‑1 (MQ=60)
gcgggggattcctttttttgtgtgGGCGGAT‑GAAATCATGAGTGCGGGCGTCTTGTAAAAC‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGG < SRR4302541.7264724/70‑1 (MQ=32)
GCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGG > SRR4302541.5095823/1‑94 (MQ=60)
TGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCA > SRR4302541.3969662/1‑94 (MQ=60)
TGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑AGCATTGTTGACCTGCCGATGAAACTGGTGGGGCA > SRR4302541.1974311/1‑94 (MQ=60)
GGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCAA > SRR4302541.6064869/1‑94 (MQ=60)
GCGATCCCGTTTTTTGGGGTGGCGGGT‑AAAATCAGGAAGGCGGGCGGCTTGACAAAA‑CGCATTTTTGCCCCGCCGATGAAACTGGTGGGGCATA < SRR4302541.7530003/94‑1 (MQ=34)
CGTTTCTGTTTTTTGTGCTGGCGGGT‑GAAATCATGAATGGGGGGGGCTTGTCAAAA‑CGAATTTTTGACCCGCCGATGAAACTGGTGGGGCATAA < SRR4302541.8717388/94‑1 (MQ=60)
GATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAA > SRR4302541.2944979/1‑94 (MQ=60)
GATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAA > SRR4302541.531534/1‑94 (MQ=60)
GATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAA < SRR4302541.3993676/94‑1 (MQ=60)
GATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGGGGGGCATAAA > SRR4302541.2267769/1‑94 (MQ=60)
GATTCCGTTCTTTGTGCGGGGGGGT‑GAAATCATGAATGCGGGCGTTTTGTCAAAA‑CGCATTGTAGACCTGCCGATGAAACTGGTGGGGCATAAA < SRR4302541.8364222/94‑1 (MQ=60)
TCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCA > SRR4302541.7938643/1‑94 (MQ=60)
cggtttttggtggtgggGGGT‑GAAATCATGAAGGCGGGGGGCTTGTAAAAC‑CGCTTTGTGGCCCCGCCGATGAAACTGGTGGGGCATAAACCAG < SRR4302541.8124324/77‑1 (MQ=33)
CCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAG > SRR4302541.3773186/1‑94 (MQ=60)
CCGTTCTTTGTGCTGGCGGGG‑GAAATCATGAATGCGGGCGGCTTGTAAAAA‑CGCATTGTTGACATGCCGATGAAACTGGTGGGGCATAAACCAG > SRR4302541.2440588/1‑94 (MQ=60)
tcttttttttgtgcgggctggtgaaagcatgatgggggggggtttgtaaaacCGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCA < SRR4302541.4360990/42‑1 (MQ=60)
cttttTTTGTGCTGGCGGGT‑GAAATCATGATTGCGGGCGGCTTGTAAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGG < SRR4302541.2453710/89‑1 (MQ=60)
CGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGG < SRR4302541.3864790/94‑1 (MQ=60)
CGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGG > SRR4302541.3774031/1‑94 (MQ=60)
GTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCCGGC > SRR4302541.8689623/1‑94 (MQ=60)
GTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGC < SRR4302541.3717089/94‑1 (MQ=60)
TTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCG > SRR4302541.3976872/1‑94 (MQ=60)
TTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCG > SRR4302541.3735598/1‑94 (MQ=60)
TTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGG < SRR4302541.3843425/94‑1 (MQ=60)
CTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAAACAGGCGGG > SRR4302541.4763564/1‑94 (MQ=60)
TTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT > SRR4302541.3891842/1‑94 (MQ=60)
TTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT > SRR4302541.4084686/1‑94 (MQ=60)
TTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT > SRR4302541.8373766/1‑94 (MQ=60)
TTGTGCGGGGGGGT‑AAAATCATGAATGCGGGCGTCTTGTCAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT < SRR4302541.5308600/94‑1 (MQ=60)
ttgtggggggggtgaaaataaggaagggGGGCGGTTTGTAAAAA‑CGCTTTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT < SRR4302541.1010199/66‑1 (MQ=50)
tggggcgggggggaaaaataatgagggcggcggcatggcaAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCT < SRR4302541.4849094/54‑1 (MQ=60)
TGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTG > SRR4302541.1056531/1‑94 (MQ=60)
TGTGCGGGGGGGT‑GAAATAATGAATGCGGGCGGCTTGAAAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTG < SRR4302541.7733687/94‑1 (MQ=60)
TGTG‑‑GGCGGGT‑AAAATCATGATTGCGGGCGTGTTGTCAAAA‑CGCATTGTTCCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGG < SRR4302541.8656610/94‑1 (MQ=60)
gtggggggGGGT‑GAAATCATGAGTGCGGGCGGTTTGTAAAAA‑CGAATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGG < SRR4302541.1292006/86‑1 (MQ=60)
GTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCCAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGG > SRR4302541.2708903/1‑94 (MQ=60)
GTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGG < SRR4302541.112355/94‑1 (MQ=60)
TGCTGGCGGGT‑GAAATCATGAGGGCGGGCGGCTTGTCAAAA‑CTCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGG < SRR4302541.3401383/94‑1 (MQ=60)
tgtgggggggaaaaataataAATGCGGGCGGCTTGTAAAAA‑CGCTTTTTTCACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGG < SRR4302541.7390099/74‑1 (MQ=60)
TGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTA > SRR4302541.4004905/1‑94 (MQ=60)
TGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTA > SRR4302541.1854303/1‑94 (MQ=60)
tggagggggaaaacataagtgcggggggctggaaAAAA‑CGGATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTA < SRR4302541.3257231/60‑1 (MQ=60)
GGCGGGT‑AAAATCATGAATGGGGGCGTCTGGTCAAAC‑CGCTTTGTGCACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTCGGCTAC < SRR4302541.4143976/94‑1 (MQ=42)
GCCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTAC < SRR4302541.3692928/94‑1 (MQ=60)
GCGGGT‑AAAATAATGAGTGCGGGCGGCTTGTCAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACG < SRR4302541.6051109/94‑1 (MQ=60)
CGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAACGTGGTGGGGCATAAACCAGCGGGGCGGGGCTACGC > SRR4302541.1158515/1‑94 (MQ=60)
CGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGT > SRR4302541.1158516/1‑94 (MQ=60)
CGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGC > SRR4302541.5513204/1‑94 (MQ=60)
GGGTAGAAATCATGAATGCGGGGGGTTTGACAAAA‑CTATTTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGT < SRR4302541.4899596/94‑1 (MQ=53)
GGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTC > SRR4302541.3277819/1‑94 (MQ=60)
GGGT‑GAAATCATGAAGGCGGGCGGCTTGCAAAAC‑CGCATTTTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTC < SRR4302541.5506733/94‑1 (MQ=60)
GGGT‑GAAATCAGGAAGGCGGGCGGTTTGAAAAAC‑CGCATTGTGGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTC < SRR4302541.1336288/94‑1 (MQ=53)
GGG‑GAAATTATGAATGCGGGCGGCTTATCAAAA‑CGCATTGTGGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCG < SRR4302541.1300346/94‑1 (MQ=60)
GT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGG > SRR4302541.7505897/1‑94 (MQ=60)
GA‑GAAATCAGGAAGGGGGGCGGCTTTTCAAAC‑CGAATTGTGGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGG < SRR4302541.7255724/94‑1 (MQ=50)
gaAAATCATGAATGCGGGGGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGC < SRR4302541.2077623/92‑1 (MQ=60)
GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCG > SRR4302541.3863408/1‑94 (MQ=60)
AATCATGAATGCGGGCGGCTTGTCAAAC‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTG < SRR4302541.5827594/94‑1 (MQ=60)
AATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTG < SRR4302541.7609030/94‑1 (MQ=60)
agccgacagcgccgggccttaggaaatcctgatttTTGACCCGCCGATGAAACTGGTGGGGCATAAGCCAGGCGGGCTGGGCTACGTCGGCGTG < SRR4302541.7524972/59‑1 (MQ=60)
ATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGC > SRR4302541.812655/1‑94 (MQ=60)
ATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGG > SRR4302541.3525151/1‑94 (MQ=60)
ATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGG > SRR4302541.5947726/1‑94 (MQ=60)
ATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGG > SRR4302541.4916548/1‑94 (MQ=60)
ATGAATGCGGGCGGCTTGTAAAAT‑CGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGG < SRR4302541.711701/94‑1 (MQ=60)
TGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGC > SRR4302541.678848/1‑94 (MQ=60)
TGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGC > SRR4302541.6501629/1‑94 (MQ=60)
GAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCA > SRR4302541.2405652/1‑94 (MQ=60)
AATGCGGGAGTCTTCGCAAAA‑CGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAG < SRR4302541.7203050/94‑1 (MQ=60)
AAGGCGGGCGGCTTGTCAAAC‑CGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAG < SRR4302541.6005739/94‑1 (MQ=60)
agggggggggtcttgtaaaagctcattgtggcCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAG < SRR4302541.5418819/62‑1 (MQ=60)
aggcggggggtttaaaAAAA‑CGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGC < SRR4302541.8434355/78‑1 (MQ=60)
gcCGGGCGGCTTGTAAAAC‑CGATTTGTTGTCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCT < SRR4302541.8724333/92‑1 (MQ=60)
GGCGGGCGGCTTGTCAAAA‑CGCATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCT < SRR4302541.7711167/94‑1 (MQ=60)
CGGGCGGCTTGTCAAAC‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTAT < SRR4302541.5548726/94‑1 (MQ=60)
GCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCCGCTATGAT > SRR4302541.7288607/1‑94 (MQ=60)
GCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGAT > SRR4302541.1995585/1‑94 (MQ=60)
GCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGAT > SRR4302541.2882596/1‑94 (MQ=60)
cgctttgtaAAAA‑CGCTTTTTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATT < SRR4302541.2380841/85‑1 (MQ=60)
CGGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATT > SRR4302541.8011581/1‑94 (MQ=60)
GGCTTGTCAAAA‑CGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTA < SRR4302541.6687816/94‑1 (MQ=60)
GGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTA > SRR4302541.8089036/1‑94 (MQ=60)
GGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTT > SRR4302541.3263944/1‑94 (MQ=60)
GGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTA > SRR4302541.3298308/1‑94 (MQ=60)
GGCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTA > SRR4302541.4633408/1‑94 (MQ=60)
GCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAACCTGGTGGGGCATAAACCAGGCGGGCTGGGCGACGTCGCCGTGCTGGCAGCTATGATTAT > SRR4302541.310638/1‑94 (MQ=60)
GCTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTAT > SRR4302541.8791600/1‑94 (MQ=60)
CTTGTTAAAA‑CGCTTTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATG < SRR4302541.5904583/94‑1 (MQ=60)
CTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATG > SRR4302541.8451180/1‑94 (MQ=60)
CTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATG > SRR4302541.1736375/1‑94 (MQ=60)
CTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATG > SRR4302541.7127232/1‑94 (MQ=60)
CTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATG > SRR4302541.7127231/1‑94 (MQ=60)
CTTGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGAGCTACGTCGGCGTGCTGGCAGCTATGATTATG > SRR4302541.3197657/1‑94 (MQ=60)
TGTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGC > SRR4302541.7510367/1‑94 (MQ=60)
GTCAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCG > SRR4302541.6981246/1‑94 (MQ=60)
GGCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCG < SRR4302541.7217390/94‑1 (MQ=60)
CAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAG > SRR4302541.5519054/1‑94 (MQ=60)
CAAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAG > SRR4302541.3341147/1‑94 (MQ=60)
AAAAGCGCATTGTTGCCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAG < SRR4302541.3699505/94‑1 (MQ=60)
AAAA‑CGTTTTGTTGGCCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGC < SRR4302541.7724924/94‑1 (MQ=60)
AAAA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGC > SRR4302541.3756438/1‑94 (MQ=60)
AA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCT > SRR4302541.7276564/1‑94 (MQ=60)
AA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCT > SRR4302541.2599001/1‑94 (MQ=60)
AA‑CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCT > SRR4302541.7063044/1‑94 (MQ=60)
A‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTT > SRR4302541.1861245/1‑94 (MQ=60)
cgcatgtttcACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTT < SRR4302541.1494154/84‑1 (MQ=60)
CGCTTTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTT < SRR4302541.1494153/94‑1 (MQ=60)
CGCTTTGTTCACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTT < SRR4302541.7832595/94‑1 (MQ=60)
CGCATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTT > SRR4302541.6184775/1‑94 (MQ=60)
GCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGCGCCTTTT > SRR4302541.3075951/1‑94 (MQ=60)
ctttgttccCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCT < SRR4302541.3875499/85‑1 (MQ=60)
CATTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCT < SRR4302541.2541824/94‑1 (MQ=60)
CATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCT > SRR4302541.8689931/1‑94 (MQ=60)
ATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTG > SRR4302541.4652142/1‑94 (MQ=60)
ATTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTG > SRR4302541.7177386/1‑94 (MQ=60)
TTGTTGGCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGG < SRR4302541.1902748/94‑1 (MQ=60)
TTGTTGCCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGG < SRR4302541.1902745/94‑1 (MQ=60)
TTGTTGACCTGCCGATGGAACGGGTGGGGAATAAACAAGGCGGGCTGGGCTACGTGGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGG < SRR4302541.4540154/94‑1 (MQ=60)
TTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGG < SRR4302541.5715095/94‑1 (MQ=60)
TTGTTGACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGG > SRR4302541.5063045/1‑94 (MQ=60)
TTTTGACCCGCCGATGAAGCTGGTGGGTCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGT < SRR4302541.6157300/94‑1 (MQ=60)
TTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTC > SRR4302541.2628221/1‑94 (MQ=60)
GACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTG < SRR4302541.1433711/94‑1 (MQ=60)
GACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTG > SRR4302541.8026761/1‑94 (MQ=60)
GACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTG < SRR4302541.2709781/94‑1 (MQ=60)
GACCCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTC > SRR4302541.6695640/1‑94 (MQ=60)
CCCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGC < SRR4302541.3818992/94‑1 (MQ=60)
ACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGC > SRR4302541.4555040/1‑94 (MQ=60)
CCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCC > SRR4302541.3850295/1‑94 (MQ=60)
CCGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCG < SRR4302541.8163681/94‑1 (MQ=60)
TGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGT > SRR4302541.6890627/1‑94 (MQ=60)
TGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGT > SRR4302541.5008956/1‑94 (MQ=60)
CGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGT < SRR4302541.8732853/94‑1 (MQ=60)
|
GAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGT‑GAAATCATGAATGCGGGCGGCTTGTCAAAA‑CGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGT > NC_000913/3742581‑3742767
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |