Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 884 257.2 12958910 96.9% 12557183 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,304,497 A→G R352R (CGT→CGC)  deaD ← inducible ATP‑independent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,304,4970AG100.0% 969.9 / NA 284R352R (CGT→CGC) deaDinducible ATP‑independent RNA helicase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (132/152);  total (132/152)

Only 100 of 297 total aligned reads displayed.

CTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGC  >  NC_000913/3304407‑3304586
                                                                                          |                                                                                         
 ttCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGa                                                                                        >  2:6216437/1‑93 (MQ=255)
 ttCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGa                                                                                        >  2:3364157/1‑93 (MQ=255)
 ttCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGa                                                                                        <  1:2366373/93‑1 (MQ=255)
  tCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGAc                                                                                       <  1:368465/93‑1 (MQ=255)
    aTAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCg                                                                                     >  1:1001842/1‑93 (MQ=255)
    aTAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCg                                                                                     >  2:3888/1‑93 (MQ=255)
      aGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGAGCGGCCAGCACGACCCGCACGACCGGTGCGACCGAt                                                                                   >  2:1786630/1‑93 (MQ=255)
       gTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATa                                                                                  >  2:867178/1‑93 (MQ=255)
       gTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATa                                                                                  <  1:4600780/93‑1 (MQ=255)
        tACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATAc                                                                                 <  1:881145/93‑1 (MQ=255)
        tACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATAc                                                                                 <  1:3091273/93‑1 (MQ=255)
         aCGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACg                                                                                >  1:5532975/1‑93 (MQ=255)
           gTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGt                                                                              >  2:4336002/1‑93 (MQ=255)
            ttCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGAACCGCACGACCGGTGCGACCGATACgggg                                                                             >  1:3455066/1‑91 (MQ=255)
             tCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGa                                                                            <  1:5631072/93‑1 (MQ=255)
             tCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGa                                                                            <  2:3221289/93‑1 (MQ=255)
              cAATGTTGCGCAGGAGACGACGCTCGCGGTTCTCACCGAACAGGAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGaa                                                                           <  1:4491386/93‑1 (MQ=255)
              cAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGaa                                                                           >  1:5103660/1‑93 (MQ=255)
              cAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGaa                                                                           <  1:1480078/93‑1 (MQ=255)
               aaTGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAc                                                                          >  1:2520088/1‑93 (MQ=255)
                aTGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACg                                                                         >  2:6094129/1‑93 (MQ=255)
                  gTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTa                                                                       >  2:2319493/1‑93 (MQ=255)
                     gcgcAGCAGACGACGCTCGCGGTTCTCCACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGa                                                                    >  1:3133468/1‑93 (MQ=255)
                     gcgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGa                                                                    >  1:3242696/1‑93 (MQ=255)
                     gcgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGa                                                                    <  1:5198429/93‑1 (MQ=255)
                      cgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGAc                                                                   <  2:6330311/93‑1 (MQ=255)
                      cgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGAc                                                                   <  1:6435407/93‑1 (MQ=255)
                      cgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGAc                                                                   <  1:6319578/93‑1 (MQ=255)
                       gcagcaGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACt                                                                  >  2:2050742/1‑93 (MQ=255)
                       gcagcaGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACt                                                                  >  1:1690002/1‑93 (MQ=255)
                       gcagcaGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACt                                                                  >  2:1711419/1‑93 (MQ=255)
                       gcagcaGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACt                                                                  >  1:5686939/1‑93 (MQ=255)
                        cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTc                                                                 >  2:4865826/1‑93 (MQ=255)
                         agcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCa                                                                <  1:4155654/93‑1 (MQ=255)
                          gcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAg                                                               >  2:4067695/1‑93 (MQ=255)
                            agACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGaa                                                             >  2:5874913/1‑93 (MQ=255)
                             gacgacGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAt                                                            >  1:6161111/1‑93 (MQ=255)
                             gacgacGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAt                                                            >  2:815322/1‑93 (MQ=255)
                             gacgacGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAt                                                            >  2:5465470/1‑93 (MQ=255)
                             gacgacGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAt                                                            <  1:825611/93‑1 (MQ=255)
                             gacgacGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAt                                                            >  1:1254297/1‑93 (MQ=255)
                              acgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGGCAGCACGACCCGCACGACCGGTGCGCCCGATACGGTGAAAGCAAGACTCAGAATc                                                           >  2:3317797/1‑93 (MQ=255)
                              acgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATc                                                           <  2:3178403/93‑1 (MQ=255)
                              acgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATc                                                           <  1:667648/93‑1 (MQ=255)
                               cgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATcc                                                          >  1:1410297/1‑93 (MQ=255)
                               cgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATcc                                                          <  1:1940310/93‑1 (MQ=255)
                               cgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATcc                                                          <  1:2801858/93‑1 (MQ=255)
                                gacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCa                                                         >  1:4078459/1‑93 (MQ=255)
                                gacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCa                                                         <  2:1857751/93‑1 (MQ=255)
                                 acgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCAt                                                        >  2:1576506/1‑93 (MQ=255)
                                  cgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATc                                                       <  1:4354238/93‑1 (MQ=255)
                                   gCTCGCTTTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCg                                                      <  1:482046/93‑1 (MQ=255)
                                   gCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCg                                                      >  2:4626920/1‑93 (MQ=255)
                                   gCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCg                                                      <  1:3374238/93‑1 (MQ=255)
                                   gCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCg                                                      >  2:2671415/1‑93 (MQ=255)
                                   ccTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCg                                                      <  2:1990663/92‑1 (MQ=255)
                                      cgcgGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATGCGGTGAACGTAAGACTCAGAATCCATCGGGa                                                   <  2:4242620/93‑1 (MQ=255)
                                      cgcgGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGa                                                   >  2:779302/1‑93 (MQ=255)
                                        cgtttCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGata                                                 <  2:5547795/90‑1 (MQ=255)
                                         ggTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGGACGTAAGACTCAGAATCCAGCGGGatag                                                >  2:1432385/1‑92 (MQ=255)
                                          gTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATc                                               <  2:3607856/93‑1 (MQ=255)
                                           ttCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCg                                              >  1:2299451/1‑93 (MQ=255)
                                            tctcAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGt                                             <  1:5847864/93‑1 (MQ=255)
                                             ctcAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTa                                            >  1:1019819/1‑93 (MQ=255)
                                             ctcAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTa                                            >  2:1645677/1‑93 (MQ=255)
                                               cAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGt                                          <  2:5729106/93‑1 (MQ=255)
                                               cAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGt                                          >  1:5476976/1‑93 (MQ=255)
                                                 aCGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTa                                        >  2:2388859/1‑93 (MQ=255)
                                                 aCGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTa                                        >  2:5202064/1‑93 (MQ=255)
                                                   gAACAGCATCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAAc                                      <  1:2735814/93‑1 (MQ=255)
                                                    aaCAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACt                                     >  1:4950406/1‑93 (MQ=255)
                                                    aaCAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACt                                     >  1:3983963/1‑93 (MQ=255)
                                                     aCAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTa                                    >  2:4017422/1‑93 (MQ=255)
                                                      cagcagCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTAc                                   >  2:5604205/1‑93 (MQ=255)
                                                       agcagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTAcc                                  >  1:3020204/1‑93 (MQ=255)
                                                        gcagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCa                                 >  1:2015162/1‑93 (MQ=255)
                                                        gcagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCa                                 <  2:5264264/93‑1 (MQ=255)
                                                        gcagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCa                                 <  1:2188353/93‑1 (MQ=255)
                                                         cagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAATTACCAg                                <  1:5362437/93‑1 (MQ=255)
                                                         cagcGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAg                                >  1:4206364/1‑93 (MQ=255)
                                                           gcgcgcGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGc                              >  2:5152341/1‑93 (MQ=255)
                                                             gcgcgGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTg                            <  2:1105645/93‑1 (MQ=255)
                                                              cgcgGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGa                           <  1:4417694/93‑1 (MQ=255)
                                                                cgGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGAGTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATa                         <  2:4530241/93‑1 (MQ=255)
                                                                 ggCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAc                        <  1:6027581/93‑1 (MQ=255)
                                                                 ggCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAc                        <  2:2484713/93‑1 (MQ=255)
                                                                  gCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACg                       >  1:1152593/1‑93 (MQ=255)
                                                                  gCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACg                       >  2:6452569/1‑93 (MQ=255)
                                                                     aGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTc                    >  2:4099665/1‑93 (MQ=255)
                                                                         cGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACg                <  2:4820639/93‑1 (MQ=255)
                                                                          gACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGt               <  2:2838494/93‑1 (MQ=255)
                                                                           aCCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTc              <  2:1159299/93‑1 (MQ=255)
                                                                             ccGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCa            >  1:1794347/1‑93 (MQ=255)
                                                                             ccGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCa            <  1:5968346/93‑1 (MQ=255)
                                                                                cACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGc         <  1:3823913/93‑1 (MQ=255)
                                                                                  cGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCa       >  1:552111/1‑93 (MQ=255)
                                                                                    aCCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACg     >  2:1290291/1‑93 (MQ=255)
                                                                                     ccGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACgg    >  2:2207025/1‑93 (MQ=255)
                                                                                       ggTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCGACGTCCAGGCCACGGGc  >  1:4904623/1‑93 (MQ=255)
                                                                                       ggTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGc  <  2:3421995/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGC  >  NC_000913/3304407‑3304586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCA  >  NC_000913/3304404‑3304590
                                                                                             |                                                                                             
CAGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGATCAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTG                                                                                               >  SRR4302534.854086/1‑94 (MQ=60)
CAGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTG                                                                                               <  SRR4302534.4396805/94‑1 (MQ=60)
CAGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTG                                                                                               >  SRR4302534.4598671/1‑94 (MQ=60)
 AGCTTCATAGTCCGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGC                                                                                              <  SRR4302534.3602011/94‑1 (MQ=60)
 AGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGC                                                                                              <  SRR4302534.1965708/94‑1 (MQ=60)
 AGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGC                                                                                              >  SRR4302534.1213124/1‑94 (MQ=60)
  GCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGCCCCGCACGACCGGTGCG                                                                                             <  SRR4302534.1616856/94‑1 (MQ=60)
  GCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCG                                                                                             <  SRR4302534.1753581/94‑1 (MQ=60)
  GCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCG                                                                                             >  SRR4302534.5515322/1‑94 (MQ=60)
   CTTCATAGTACGTTCAATGTTGCTCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGA                                                                                            <  SRR4302534.3315970/94‑1 (MQ=60)
    TTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGAC                                                                                           <  SRR4302534.2429201/94‑1 (MQ=60)
     TCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACC                                                                                          <  SRR4302534.377864/94‑1 (MQ=60)
      CATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCG                                                                                         >  SRR4302534.1027527/1‑94 (MQ=60)
        TAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGAT                                                                                       >  SRR4302534.5149612/1‑94 (MQ=60)
         AGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATA                                                                                      >  SRR4302534.1609012/1‑94 (MQ=60)
          GTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATAC                                                                                     >  SRR4302534.3158960/1‑94 (MQ=60)
          GTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATAC                                                                                     <  SRR4302534.4725644/94‑1 (MQ=60)
          GTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATAC                                                                                     <  SRR4302534.4206367/94‑1 (MQ=60)
           TACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACG                                                                                    <  SRR4302534.3172565/94‑1 (MQ=60)
           TACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACG                                                                                    >  SRR4302534.5682311/1‑94 (MQ=60)
           TACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACG                                                                                    <  SRR4302534.903424/94‑1 (MQ=60)
              GTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTG                                                                                 <  SRR4302534.5679191/94‑1 (MQ=60)
              GTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTG                                                                                 <  SRR4302534.6010847/94‑1 (MQ=60)
              GTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGAACCGCACGACCGGTGCGACCGATACGGGG                                                                                 >  SRR4302534.3547939/1‑94 (MQ=60)
              GTTCAATGTGGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTG                                                                                 <  SRR4302534.327399/94‑1 (MQ=60)
                TCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAA                                                                               >  SRR4302534.5241406/1‑94 (MQ=60)
                TCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAA                                                                               <  SRR4302534.5783477/94‑1 (MQ=60)
                TCAATGCTGCGCAGCAGACGACGCTCGCGGGTCTCAACGAACATCAGCGCGTGGCCAGAACGTCCCGCACGACCGGTTCGAACGATCCGGTGAG                                                                               >  SRR4302534.1985728/1‑94 (MQ=50)
                 CAATGTTGCGCAGGAGACGACGCTCGCGGTTCTCACCGAACAGGAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAC                                                                              <  SRR4302534.4612917/94‑1 (MQ=60)
                 CAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAC                                                                              <  SRR4302534.571196/94‑1 (MQ=60)
                 CAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAC                                                                              >  SRR4302534.681633/1‑94 (MQ=60)
                 CAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAC                                                                              >  SRR4302534.2586991/1‑94 (MQ=60)
                 CAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAAC                                                                              <  SRR4302534.1519000/94‑1 (MQ=60)
                  AATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACG                                                                             >  SRR4302534.6177344/1‑94 (MQ=60)
                  AATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACG                                                                             >  SRR4302534.4511729/1‑94 (MQ=60)
                   ATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGT                                                                            <  SRR4302534.1845456/94‑1 (MQ=60)
                    TGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCTACCGATACGGTGAACGTA                                                                           >  SRR4302534.5624741/1‑94 (MQ=60)
                    TGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTA                                                                           <  SRR4302534.3490719/94‑1 (MQ=60)
                     GTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAA                                                                          <  SRR4302534.2826929/94‑1 (MQ=60)
                      gcGCGCAGAAGACGCCGCTCGCGGTCCTCAACAAACCGCAGCGCGCGGCCAGCACGCCCCGCACGACCGGTGCGACCGATACGGTGAACGTAAG                                                                         <  SRR4302534.3172756/92‑1 (MQ=60)
                      TTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAG                                                                         <  SRR4302534.1746582/94‑1 (MQ=60)
                       TGCGCAGCAGACGACGCTCGCGGTTCTCCACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGA                                                                        >  SRR4302534.3215830/1‑94 (MQ=60)
                       TGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGA                                                                        >  SRR4302534.3328986/1‑94 (MQ=60)
                       TGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGA                                                                        >  SRR4302534.1038435/1‑94 (MQ=60)
                        GCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGAC                                                                       <  SRR4302534.5338629/94‑1 (MQ=60)
                         CGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACT                                                                      <  SRR4302534.6608873/94‑1 (MQ=60)
                         CGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACT                                                                      <  SRR4302534.6490354/94‑1 (MQ=60)
                         CGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACT                                                                      >  SRR4302534.5840943/1‑94 (MQ=60)
                         CGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACT                                                                      >  SRR4302534.1733933/1‑94 (MQ=60)
                          GCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACAGGTGCGACCGATACGGAGAACGTAAGACTC                                                                     >  SRR4302534.1490875/1‑94 (MQ=60)
                           CAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCA                                                                    >  SRR4302534.582030/1‑94 (MQ=60)
                            AGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATCCGGTGcacgcacgaccccg                                                                   >  SRR4302534.2863985/1‑80 (MQ=60)
                            AGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAG                                                                   >  SRR4302534.4137870/1‑94 (MQ=60)
                            AGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAG                                                                   <  SRR4302534.4267855/94‑1 (MQ=60)
                            AGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAG                                                                   >  SRR4302534.6245486/1‑94 (MQ=60)
                             GCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGA                                                                  >  SRR4302534.3196831/1‑94 (MQ=60)
                               AGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAT                                                                >  SRR4302534.2365032/1‑94 (MQ=60)
                               AGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAT                                                                >  SRR4302534.6328695/1‑94 (MQ=60)
                               AGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAT                                                                >  SRR4302534.1287357/1‑94 (MQ=60)
                               AGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAT                                                                <  SRR4302534.2326232/94‑1 (MQ=60)
                               AGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAAT                                                                >  SRR4302534.5439083/1‑94 (MQ=60)
                                GACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATC                                                               <  SRR4302534.846382/94‑1 (MQ=60)
                                GACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATC                                                               <  SRR4302534.3636912/94‑1 (MQ=60)
                                GACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGAACGACCGGTGCGACCGCTACGGGTAACGGAAGATTCAGAATC                                                               >  SRR4302534.2518897/1‑94 (MQ=60)
                                 ACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGCCCGGTGCGCCCGATACGGTGAACGTAAGACTCAGAATCC                                                              <  SRR4302534.1663485/94‑1 (MQ=60)
                                 ACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCC                                                              >  SRR4302534.1447399/1‑94 (MQ=60)
                                 ACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCC                                                              >  SRR4302534.6183811/1‑94 (MQ=60)
                                 ACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCC                                                              <  SRR4302534.683911/94‑1 (MQ=60)
                                  CGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCA                                                             <  SRR4302534.5365010/94‑1 (MQ=60)
                                  CGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCA                                                             <  SRR4302534.2875540/94‑1 (MQ=60)
                                  CGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCA                                                             >  SRR4302534.4187925/1‑94 (MQ=60)
                                  CGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCA                                                             <  SRR4302534.1991053/94‑1 (MQ=60)
                                   GACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCAT                                                            >  SRR4302534.4556910/1‑94 (MQ=60)
                                    ACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATC                                                           <  SRR4302534.1909797/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          <  SRR4302534.4471773/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          <  SRR4302534.106018/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          <  SRR4302534.3822743/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          <  SRR4302534.1499387/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          >  SRR4302534.2229731/1‑94 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          <  SRR4302534.2024157/94‑1 (MQ=60)
                                     CGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCG                                                          >  SRR4302534.3423728/1‑94 (MQ=60)
                                      GCTCGCTTTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGG                                                         <  SRR4302534.494130/94‑1 (MQ=60)
                                      GCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGG                                                         <  SRR4302534.404806/94‑1 (MQ=60)
                                      GCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGG                                                         <  SRR4302534.3464660/94‑1 (MQ=60)
                                         CGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGAT                                                      <  SRR4302534.5138993/94‑1 (MQ=60)
                                           CGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATAT                                                    <  SRR4302534.1228646/94‑1 (MQ=60)
                                           CGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATAT                                                    >  SRR4302534.5795981/1‑94 (MQ=60)
                                            GGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATC                                                   <  SRR4302534.627145/94‑1 (MQ=60)
                                             GTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCG                                                  <  SRR4302534.4509183/94‑1 (MQ=60)
                                             GTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCG                                                  <  SRR4302534.5662846/94‑1 (MQ=60)
                                             GTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCG                                                  >  SRR4302534.2360489/1‑94 (MQ=60)
                                              TTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGT                                                 >  SRR4302534.4539892/1‑94 (MQ=60)
                                               TCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTA                                                >  SRR4302534.1046072/1‑94 (MQ=60)
                                               TCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTA                                                >  SRR4302534.3186138/1‑94 (MQ=60)
                                               TCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTA                                                <  SRR4302534.6006631/94‑1 (MQ=60)
                                                CTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAG                                               >  SRR4302534.5888057/1‑94 (MQ=60)
                                                 TCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGT                                              >  SRR4302534.5624656/1‑94 (MQ=60)
                                                  CAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTT                                             <  SRR4302534.2501519/94‑1 (MQ=60)
                                                  CAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTT                                             <  SRR4302534.835984/94‑1 (MQ=60)
                                                   AACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTA                                            <  SRR4302534.2387483/94‑1 (MQ=60)
                                                    ACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAA                                           >  SRR4302534.5994873/1‑94 (MQ=60)
                                                    ACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAA                                           <  SRR4302534.4078809/94‑1 (MQ=60)
                                                      GAACAGCATCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACT                                         <  SRR4302534.2807932/94‑1 (MQ=60)
                                                      GAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACT                                         <  SRR4302534.875705/94‑1 (MQ=60)
                                                      GAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACT                                         >  SRR4302534.4090579/1‑94 (MQ=60)
                                                      GAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACT                                         >  SRR4302534.5084488/1‑94 (MQ=60)
                                                      GAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACT                                         <  SRR4302534.1440815/94‑1 (MQ=60)
                                                       AACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTA                                        <  SRR4302534.2916525/94‑1 (MQ=60)
                                                       AACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTA                                        <  SRR4302534.4958184/94‑1 (MQ=60)
                                                         CAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACC                                      >  SRR4302534.3099293/1‑94 (MQ=60)
                                                          AGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATTGTAGTTAACTACCA                                     <  SRR4302534.4296152/94‑1 (MQ=60)
                                                          AGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCA                                     >  SRR4302534.2067901/1‑94 (MQ=60)
                                                          AGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCA                                     >  SRR4302534.4223624/1‑94 (MQ=60)
                                                           GCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAG                                    <  SRR4302534.2246213/94‑1 (MQ=60)
                                                           GCAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAG                                    >  SRR4302534.4319901/1‑94 (MQ=60)
                                                            CAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAATTACCAGG                                   <  SRR4302534.5506963/94‑1 (MQ=60)
                                                            CAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGT                                   <  SRR4302534.5048894/94‑1 (MQ=60)
                                                            CAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGG                                   <  SRR4302534.6575696/94‑1 (MQ=60)
                                                            CAGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGG                                   <  SRR4302534.470148/94‑1 (MQ=60)
                                                             AGCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGC                                  >  SRR4302534.6632926/1‑94 (MQ=60)
                                                             AGAGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGCAGTTAACTACCAGGC                                  >  SRR4302534.5247868/1‑94 (MQ=60)
                                                              GCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCT                                 <  SRR4302534.6053834/94‑1 (MQ=60)
                                                              GCGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCT                                 <  SRR4302534.4894054/94‑1 (MQ=60)
                                                               CGCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTG                                <  SRR4302534.6388660/94‑1 (MQ=60)
                                                                GCGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGA                               <  SRR4302534.3586493/94‑1 (MQ=60)
                                                                 CGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGAT                              <  SRR4302534.5516058/94‑1 (MQ=60)
                                                                 CGCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGAT                              <  SRR4302534.4536959/94‑1 (MQ=60)
                                                                  GTGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATA                             >  SRR4302534.1203784/1‑94 (MQ=60)
                                                                  GCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATA                             >  SRR4302534.1097224/1‑94 (MQ=60)
                                                                  GCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATA                             >  SRR4302534.1785335/1‑94 (MQ=60)
                                                                  GCGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGCGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCCGATA                             >  SRR4302534.5021589/1‑94 (MQ=60)
                                                                   CGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAC                            <  SRR4302534.4904376/94‑1 (MQ=60)
                                                                   CGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAC                            >  SRR4302534.2641382/1‑94 (MQ=60)
                                                                   CGGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAC                            >  SRR4302534.3131345/1‑94 (MQ=60)
                                                                    GGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACG                           >  SRR4302534.1182809/1‑94 (MQ=60)
                                                                    GGCCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACG                           <  SRR4302534.6191375/94‑1 (MQ=60)
                                                                      CCAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCT                         <  SRR4302534.2607031/94‑1 (MQ=60)
                                                                       CAGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTC                        >  SRR4302534.651691/1‑94 (MQ=60)
                                                                       CAGCACGACACGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTC                        >  SRR4302534.6484285/1‑94 (MQ=60)
                                                                        AGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCA                       >  SRR4302534.5673438/1‑94 (MQ=60)
                                                                        AGCACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCA                       <  SRR4302534.1095982/94‑1 (MQ=60)
                                                                          CACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAAC                     <  SRR4302534.571819/94‑1 (MQ=60)
                                                                          CACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAAC                     <  SRR4302534.5265342/94‑1 (MQ=60)
                                                                          CACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAAC                     >  SRR4302534.4343094/1‑94 (MQ=60)
                                                                          CACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAAC                     <  SRR4302534.3792634/94‑1 (MQ=60)
                                                                           ACGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACG                    <  SRR4302534.3454265/94‑1 (MQ=60)
                                                                            CGACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGT                   >  SRR4302534.4688963/1‑94 (MQ=60)
                                                                             GACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTC                  >  SRR4302534.1366766/1‑94 (MQ=60)
                                                                             GACCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTC                  >  SRR4302534.2009380/1‑94 (MQ=60)
                                                                               CCCGCACGCCCGGTGCGACGGATACGGTGAACGTAAGACTCAGAAACAATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCA                <  SRR4302534.6626733/94‑1 (MQ=60)
                                                                               CCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCA                <  SRR4302534.2538973/94‑1 (MQ=60)
                                                                               CCCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCA                >  SRR4302534.1840950/1‑94 (MQ=60)
                                                                                CCGCACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAG               <  SRR4302534.6130426/94‑1 (MQ=60)
                                                                                 CGCACGACCGGTGCTACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGG              <  SRR4302534.230835/94‑1 (MQ=60)
                                                                                   CACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCC            <  SRR4302534.4462707/94‑1 (MQ=60)
                                                                                   CACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCC            <  SRR4302534.3926635/94‑1 (MQ=60)
                                                                                    ACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCA           >  SRR4302534.3471324/1‑94 (MQ=60)
                                                                                    ACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCA           >  SRR4302534.565724/1‑94 (MQ=60)
                                                                                    ACGACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCA           <  SRR4302534.2192371/94‑1 (MQ=60)
                                                                                       ACCGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGG        >  SRR4302534.4277741/1‑94 (MQ=60)
                                                                                         CGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCGACGTCCAGGCCACGGGC      >  SRR4302534.5037583/1‑94 (MQ=60)
                                                                                         CGGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGC      >  SRR4302534.4141542/1‑94 (MQ=60)
                                                                                          GGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCT     <  SRR4302534.838877/94‑1 (MQ=60)
                                                                                          GGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCT     <  SRR4302534.302057/94‑1 (MQ=60)
                                                                                          GGTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGCATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCT     >  SRR4302534.1697210/1‑94 (MQ=60)
                                                                                           GTGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTG    <  SRR4302534.5599371/94‑1 (MQ=60)
                                                                                            TGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGC   >  SRR4302534.6446931/1‑94 (MQ=60)
                                                                                            TGCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGC   <  SRR4302534.2558823/94‑1 (MQ=60)
                                                                                             GCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCA  >  SRR4302534.1304548/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGCTTCATAGTACGTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCA  >  NC_000913/3304404‑3304590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑