Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,310,176 |
A→G |
R81R (CGT→CGC) |
truB ← |
tRNA pseudouridine 5S synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,310,176 | 0 | A | G | 99.6%
| 835.2
/ ‑5.0
| 242 | R81R (CGT→CGC) | truB | tRNA pseudouridine 5S synthase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (127/114); total (128/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 |
Only 100 of 256 total aligned reads displayed.
GCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGACGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGT > NC_000913/3310087‑3310265
|
gCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGgcgc > 2:3584566/1‑93 (MQ=255)
gCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGgcgc < 2:1165126/93‑1 (MQ=255)
tGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAAt < 1:2741372/93‑1 (MQ=255)
gCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATg > 1:5562670/1‑93 (MQ=255)
ccAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGa < 2:842621/93‑1 (MQ=255)
ccAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGa < 2:3302378/93‑1 (MQ=255)
cAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGAc > 1:1151383/1‑93 (MQ=255)
aGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGaac > 2:3827325/1‑91 (MQ=255)
aGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGAcc > 1:1587562/1‑93 (MQ=255)
aGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGAcc > 2:5172061/1‑93 (MQ=255)
gctgctCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGAccc > 2:5880717/1‑93 (MQ=255)
tgctCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGa < 2:257899/93‑1 (MQ=255)
tgctCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGa < 1:3320186/93‑1 (MQ=255)
ctctGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATa > 2:1123585/1‑93 (MQ=255)
tctGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAg < 1:3599290/93‑1 (MQ=255)
tctGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAg > 1:455686/1‑93 (MQ=255)
ctGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGc < 2:656283/93‑1 (MQ=255)
tGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCg < 1:6304977/93‑1 (MQ=255)
gcgcTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGt > 1:5602536/1‑93 (MQ=255)
gcTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGttt > 1:3831698/1‑93 (MQ=255)
tAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGt > 2:5668534/1‑93 (MQ=255)
tAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGt < 1:3381558/93‑1 (MQ=255)
aGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCgg > 2:544575/1‑93 (MQ=255)
aGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAACGACCCGATAGCGTTTGTCgg > 1:350835/1‑93 (MQ=255)
gTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAg > 2:1599059/1‑93 (MQ=255)
ttACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGt > 2:3133372/1‑93 (MQ=255)
tACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTc > 1:4737639/1‑93 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTcc > 2:142339/1‑93 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTcc > 2:1785512/1‑93 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTcc < 2:2772194/93‑1 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTcc < 2:6184604/93‑1 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGCTTGTCGGAGTcc > 2:2307556/1‑93 (MQ=255)
aCCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATCACCCGATAGCGTTTGTCGGAGTcc < 1:6228274/93‑1 (MQ=255)
ccGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCca < 1:934192/93‑1 (MQ=255)
ccGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCca > 2:4612061/1‑93 (MQ=255)
ccGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCca < 2:4591283/93‑1 (MQ=255)
cGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCcag > 2:5309861/1‑93 (MQ=255)
ggACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCcagc < 2:4034570/93‑1 (MQ=255)
ggACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCcagc > 2:3964274/1‑93 (MQ=255)
ggACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGCCcagc > 2:3675497/1‑93 (MQ=255)
aCGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCcagcag > 1:5811732/1‑93 (MQ=255)
aCGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCcagcag < 2:4107264/93‑1 (MQ=255)
cGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGa < 1:619654/93‑1 (MQ=255)
gTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAt > 2:2476857/1‑93 (MQ=255)
gTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAt > 1:4550562/1‑93 (MQ=255)
gTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAt > 1:3494311/1‑93 (MQ=255)
tcttcAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAACGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATAc > 2:5618829/1‑93 (MQ=255)
cttcAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACt > 2:1070702/1‑93 (MQ=255)
aCGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGaa > 1:1853894/1‑93 (MQ=255)
gATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGaaaa > 2:1836966/1‑93 (MQ=255)
aTCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAAc < 1:3086608/93‑1 (MQ=255)
aTCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAAc > 1:2222593/1‑93 (MQ=255)
tCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACt < 1:6054016/93‑1 (MQ=255)
cTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACtt < 2:6027938/93‑1 (MQ=255)
tGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGACGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtc > 2:4979128/1‑93 (MQ=255)
tCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtcgt < 2:4291615/93‑1 (MQ=255)
tCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtcgt < 2:5851796/93‑1 (MQ=255)
ccGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtcgtc < 1:2499734/93‑1 (MQ=255)
ccGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtcgtc < 2:6104708/93‑1 (MQ=255)
cGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTtcgtcg > 2:5097399/1‑93 (MQ=255)
gTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGc > 2:4491961/1‑93 (MQ=255)
tCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCt > 1:3975552/1‑93 (MQ=255)
cGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCtt < 2:2351139/93‑1 (MQ=255)
cGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCtt < 2:2983203/93‑1 (MQ=255)
gCATCAGAAGTATCGGTACGCTGTCCAAGGCGTGCAATGACCCGATAGCGTTTGTCGTAGTCCAGCAGATACTGGGAACACTTCGTCGCTTcc > 1:5392852/1‑93 (MQ=255)
gCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTcc > 1:1014596/1‑93 (MQ=255)
gCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTcc > 1:2083345/1‑93 (MQ=255)
cATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTccc < 2:5332516/93‑1 (MQ=255)
cATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTccc < 1:4874435/93‑1 (MQ=255)
aTCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGCGTCCAGCAGATCCTGGGCACACTTCGTCGCTTcacc > 1:2816857/1‑93 (MQ=255)
aTCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTcccc > 2:3431178/1‑93 (MQ=255)
aTCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTcccc < 1:6181865/93‑1 (MQ=255)
ggAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAg > 2:3250914/2‑93 (MQ=255)
aGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAg > 2:174722/1‑93 (MQ=255)
aGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAg > 1:2904079/1‑93 (MQ=255)
aGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAg > 1:523631/1‑93 (MQ=255)
aaGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGc > 2:1932439/1‑93 (MQ=255)
aGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCa > 1:1637127/1‑93 (MQ=255)
aGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCa > 2:6316129/1‑93 (MQ=255)
tATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCaaa < 1:1220324/93‑1 (MQ=255)
aTCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAAt > 2:2716279/1‑93 (MQ=255)
tACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCa > 2:4864704/1‑93 (MQ=255)
aCGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCaa < 1:1363362/93‑1 (MQ=255)
cGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAAc > 1:2114426/1‑93 (MQ=255)
cGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAAc < 2:5742487/93‑1 (MQ=255)
gCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACa > 1:4512345/1‑93 (MQ=255)
tGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATg < 2:1655449/93‑1 (MQ=255)
ggccAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAACCTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGc < 1:1742145/91‑1 (MQ=255)
gTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGc > 2:4368979/1‑93 (MQ=255)
tCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGcc > 1:1928731/1‑93 (MQ=255)
ccAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCg > 2:2083078/1‑93 (MQ=255)
ccAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCACCGAGGCAAATCGGCAACATGCCg > 1:2855516/1‑93 (MQ=255)
cAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCgg > 1:2664785/1‑93 (MQ=255)
cAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCgg < 1:421235/93‑1 (MQ=255)
cAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCgg > 2:6364627/1‑93 (MQ=255)
cAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCgg < 1:5648464/93‑1 (MQ=255)
aaGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGt > 2:5903775/1‑93 (MQ=255)
aaGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGt < 1:3224338/93‑1 (MQ=255)
aaGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGt > 1:4287710/1‑93 (MQ=255)
aaGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGt > 2:646171/1‑93 (MQ=255)
|
GCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGACGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGT > NC_000913/3310087‑3310265
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTGCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGACGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCC > NC_000913/3310084‑3310269
|
AGTGCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGC > SRR4302534.2659611/1‑94 (MQ=60)
TGCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGC > SRR4302534.1859113/1‑94 (MQ=60)
GCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCG < SRR4302534.466844/94‑1 (MQ=60)
CTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAAT > SRR4302534.2247422/1‑94 (MQ=60)
CTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAAT > SRR4302534.1564912/1‑94 (MQ=60)
TGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATG < SRR4302534.2813606/94‑1 (MQ=60)
TGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATG > SRR4302534.5712860/1‑94 (MQ=60)
TGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATG < SRR4302534.1632828/94‑1 (MQ=60)
CCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGAC > SRR4302534.1181567/1‑94 (MQ=60)
CAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACC > SRR4302534.4472477/1‑94 (MQ=60)
CAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACC > SRR4302534.1629087/1‑94 (MQ=60)
CAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACC > SRR4302534.6229877/1‑94 (MQ=60)
GCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCG < SRR4302534.3590913/94‑1 (MQ=60)
CTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGA > SRR4302534.2728921/1‑94 (MQ=60)
CTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGA > SRR4302534.6354906/1‑94 (MQ=60)
TGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGAT < SRR4302534.3408960/94‑1 (MQ=60)
TGCTCTGCGCGAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGAT < SRR4302534.6544025/94‑1 (MQ=60)
CTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAG > SRR4302534.1748118/1‑94 (MQ=60)
CTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAG > SRR4302534.467218/1‑94 (MQ=60)
CTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAG > SRR4302534.392388/1‑94 (MQ=60)
CTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAG < SRR4302534.3671610/94‑1 (MQ=60)
CTCTGCGCTAAAGGATACCGGACGTTCTTCAACGATCTGTCCGTCGGCGTCAGAAGGATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAG > SRR4302534.637805/1‑94 (MQ=60)
TCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGC < SRR4302534.3696086/94‑1 (MQ=60)
CTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCG < SRR4302534.3370449/94‑1 (MQ=60)
CTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCG < SRR4302534.1921547/94‑1 (MQ=60)
TGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGT > SRR4302534.5754052/1‑94 (MQ=60)
TGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGT < SRR4302534.6475471/94‑1 (MQ=60)
TGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGT < SRR4302534.338564/94‑1 (MQ=60)
GCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTT > SRR4302534.5791554/1‑94 (MQ=60)
CGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTT > SRR4302534.3934605/1‑94 (MQ=60)
GCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTG < SRR4302534.5730053/94‑1 (MQ=60)
CTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGT < SRR4302534.3255140/94‑1 (MQ=60)
TAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTC < SRR4302534.3472209/94‑1 (MQ=60)
AAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGCCCCGATAGCGTTTGTCG < SRR4302534.5030362/94‑1 (MQ=60)
AAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCG < SRR4302534.17719/94‑1 (MQ=60)
AAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGG > SRR4302534.4831516/1‑94 (MQ=60)
AAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAACGACCCGATAGCGTTTGTCGG > SRR4302534.359823/1‑94 (MQ=60)
AGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGA > SRR4302534.4398176/1‑94 (MQ=60)
AGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGA < SRR4302534.915179/94‑1 (MQ=60)
TTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTC > SRR4302534.4866266/1‑94 (MQ=60)
TACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCC < SRR4302534.1224728/94‑1 (MQ=60)
ACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCA > SRR4302534.4667624/1‑94 (MQ=60)
ACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATCACCCGATAGCGTTTGTCGGAGTCCA < SRR4302534.6397356/94‑1 (MQ=60)
CCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAG < SRR4302534.957956/94‑1 (MQ=60)
GGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCA < SRR4302534.3578193/94‑1 (MQ=60)
GACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGTGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAG < SRR4302534.2746509/94‑1 (MQ=60)
GACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAG > SRR4302534.5969474/1‑94 (MQ=60)
CGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAT > SRR4302534.4267132/1‑94 (MQ=60)
CGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAT > SRR4302534.4673921/1‑94 (MQ=60)
CGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAT > SRR4302534.995240/1‑94 (MQ=60)
CGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAT > SRR4302534.3588257/1‑94 (MQ=60)
CGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGAT < SRR4302534.634700/94‑1 (MQ=60)
GTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATA < SRR4302534.2274950/94‑1 (MQ=60)
GTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATA < SRR4302534.5247822/94‑1 (MQ=60)
GTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATA > SRR4302534.2927206/1‑94 (MQ=60)
TTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATAC < SRR4302534.3023133/94‑1 (MQ=60)
TCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACT < SRR4302534.2076393/94‑1 (MQ=60)
CTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTG > SRR4302534.4911975/1‑94 (MQ=60)
CTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTG < SRR4302534.350705/94‑1 (MQ=60)
TCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGG > SRR4302534.5793076/1‑94 (MQ=60)
CAACGATCTGTCCGTCGGCATCAGAAGTATCGGTAAACTGTCAAAGGTGCGCAATGACCCGATAGCGTTTGTCGGAGCCCAGCGGAGACAGGGA > SRR4302534.2660630/1‑94 (MQ=60)
AACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAA > SRR4302534.1902136/1‑94 (MQ=60)
ACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAA < SRR4302534.3448602/94‑1 (MQ=60)
GATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAAC > SRR4302534.2281459/1‑94 (MQ=60)
GATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAAC > SRR4302534.2936579/1‑94 (MQ=60)
ATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACT < SRR4302534.3167716/94‑1 (MQ=60)
TCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTT < SRR4302534.6218646/94‑1 (MQ=60)
GTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGT < SRR4302534.3686311/94‑1 (MQ=60)
TCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTC < SRR4302534.374213/94‑1 (MQ=60)
TCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTC > SRR4302534.5923726/1‑94 (MQ=60)
CCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCG < SRR4302534.2566109/94‑1 (MQ=60)
CGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGC > SRR4302534.5603212/1‑94 (MQ=60)
CGTCGGCATCAGAAGAATCGGTAGGCTGGCAAAGGCGCGCAATTACCCGGTAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGT > SRR4302534.3791797/1‑94 (MQ=60)
GTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCT > SRR4302534.4081952/1‑94 (MQ=60)
GTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCT < SRR4302534.2935786/94‑1 (MQ=60)
GTCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCT < SRR4302534.2599137/94‑1 (MQ=60)
TCGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTT < SRR4302534.1398279/94‑1 (MQ=60)
CGGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTC < SRR4302534.5544481/94‑1 (MQ=60)
GGCATCAGAAGTATCGGTACGCTGTCCAAGGCGTGCAATGACCCGATAGCGTTTGTCGTAGTCCAGCAGATACTGGGAACACTTCGTCGCTTCC > SRR4302534.5538068/1‑94 (MQ=60)
GGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCC > SRR4302534.2137923/1‑94 (MQ=60)
GGCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCC > SRR4302534.1040709/1‑94 (MQ=60)
GCATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCC < SRR4302534.2142243/94‑1 (MQ=60)
CATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGCGTCCAGCAGATCCTGGGCACACTTCGTCGCTTCACC > SRR4302534.2890949/1‑94 (MQ=60)
CATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCC < SRR4302534.5006636/94‑1 (MQ=60)
ATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCG > SRR4302534.1127568/1‑94 (MQ=60)
ATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCG < SRR4302534.6350120/94‑1 (MQ=60)
ATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCG > SRR4302534.4599862/1‑94 (MQ=60)
ATCAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCG < SRR4302534.2875940/94‑1 (MQ=60)
CAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAG > SRR4302534.2980298/1‑94 (MQ=60)
CAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAG > SRR4302534.536648/1‑94 (MQ=60)
CAGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAG > SRR4302534.643374/1‑94 (MQ=60)
AGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGG > SRR4302534.2840836/1‑94 (MQ=60)
AGAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCAGAGG > SRR4302534.599625/1‑94 (MQ=60)
GAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGC < SRR4302534.4043264/94‑1 (MQ=60)
GAAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGC < SRR4302534.5497288/94‑1 (MQ=60)
AAGTATCGTTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCA < SRR4302534.2033606/94‑1 (MQ=60)
AAGTATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCA > SRR4302534.1679826/1‑94 (MQ=60)
TATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAAT < SRR4302534.1252448/94‑1 (MQ=60)
TATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAAT > SRR4302534.1221793/1‑94 (MQ=60)
ATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATC > SRR4302534.3107723/1‑94 (MQ=60)
ATCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATC < SRR4302534.1436802/94‑1 (MQ=60)
TCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATTG < SRR4302534.6369096/94‑1 (MQ=60)
TCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCG < SRR4302534.6369097/94‑1 (MQ=60)
TCGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCG > SRR4302534.4921235/1‑94 (MQ=60)
CGGTACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGG < SRR4302534.4094170/94‑1 (MQ=60)
ACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAAC < SRR4302534.1399281/94‑1 (MQ=60)
ACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAAC > SRR4302534.2170048/1‑94 (MQ=60)
ACGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAAC > SRR4302534.4676876/1‑94 (MQ=60)
CGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACA > SRR4302534.4634559/1‑94 (MQ=60)
CGCTGTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACA < SRR4302534.6360685/94‑1 (MQ=60)
GTCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCC > SRR4302534.1979161/1‑94 (MQ=60)
GGCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAACCTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCC < SRR4302534.1787370/94‑1 (MQ=60)
TCCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCACCGAGGCAAATCGGCAACATGCCG > SRR4302534.2930521/1‑94 (MQ=60)
CCAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGG > SRR4302534.2735221/1‑94 (MQ=60)
CAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCTAATCGGCAACATGCCGGT < SRR4302534.2543541/94‑1 (MQ=60)
CAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGT < SRR4302534.5801369/94‑1 (MQ=60)
CAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGT < SRR4302534.432008/94‑1 (MQ=60)
CAAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGT > SRR4302534.4403870/1‑94 (MQ=60)
AAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTC < SRR4302534.6176361/94‑1 (MQ=60)
AAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTC > SRR4302534.1623489/1‑94 (MQ=60)
AAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTC < SRR4302534.1934664/94‑1 (MQ=60)
AAGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTC < SRR4302534.3309981/94‑1 (MQ=60)
AGGCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCG > SRR4302534.2253420/1‑94 (MQ=60)
GCGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCC > SRR4302534.5648138/1‑94 (MQ=60)
|
AGTGCCGCTGCCAGCTGCTCTGCGCTAAAGGTTACCGGACGTTCTTCAACGATCTGTCCGTCGGCATCAGAAGTATCGGTACGCTGTCCAAGACGCGCAATGACCCGATAGCGTTTGTCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCC > NC_000913/3310084‑3310269
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
