Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,310,422	T→C	D133G (GAC→GGC)	rbfA ←	ribosome‑binding factor A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,310,422	0	T	C	99.7%	1170.2 / ‑5.4	341	D133G (GAC→GGC)	rbfA	ribosome‑binding factor A
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (173/167); total (173/168)
Fisher's exact test for biased strand distribution p-value = 4.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 380 total aligned reads displayed.

CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC  >  NC_000913/3310332‑3310511

cAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGccc                                                                                         <  2:5925054/93‑1 (MQ=255)

 aGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCATCAACAAAACGCCGTTAATGTCGCGACAGCGACGACGAGGACGACTCATTAGccct                                                                                        >  1:1492098/1‑93 (MQ=255)

 aGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGccct                                                                                        >  1:4615098/1‑93 (MQ=255)

 aGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGccct                                                                                        >  1:8426689/1‑93 (MQ=255)

  gcgcATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGccctc                                                                                       >  2:906354/1‑93 (MQ=255)

   cgcATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGccctcc                                                                                      <  1:4779663/93‑1 (MQ=255)

    gcATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCcctcct                                                                                     <  1:224058/93‑1 (MQ=255)

    gcATCGATGCTGGACATAACCTGAGGCTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGAATCATTAGCcctcct                                                                                     >  2:7884482/1‑93 (MQ=255)

    ccATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCcctcct                                                                                     <  1:3259401/92‑1 (MQ=255)

     cATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCtt                                                                                    >  1:2385870/1‑93 (MQ=255)

      aTCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTg                                                                                   <  1:1122334/93‑1 (MQ=255)

       tCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGc                                                                                  >  2:3051014/1‑93 (MQ=255)

       tCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGc                                                                                  <  1:2514551/93‑1 (MQ=255)

       tCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGc                                                                                  >  1:6963952/1‑93 (MQ=255)

        cGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCt                                                                                 <  2:8646459/93‑1 (MQ=255)

         gTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTg                                                                                <  1:3098402/93‑1 (MQ=255)

          ttGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTgt                                                                               <  1:3150802/93‑1 (MQ=255)

             cTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTgtcgt                                                                            >  2:2546437/1‑93 (MQ=255)

              tGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTgtcgtc                                                                           <  1:915817/93‑1 (MQ=255)

              tGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTgtcgtc                                                                           >  1:8198916/1‑93 (MQ=255)

               ggACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTcc                                                                          <  1:1833172/93‑1 (MQ=255)

               ggACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTcc                                                                          <  1:4942809/93‑1 (MQ=255)

                 aCATACCCTGAGGTTTAGCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCgg                                                                        <  1:2794469/93‑1 (MQ=255)

                   aTACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATTGCGCGACCTCGACGACGAGGACGACTCATTAGCACTCCTTGCTGTCGTCCGGGt                                                                      >  2:1248426/1‑93 (MQ=255)

                       ccTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAac                                                                  >  2:5434531/1‑93 (MQ=255)

                       ccTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAac                                                                  >  2:528245/1‑93 (MQ=255)

                         tGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAacac                                                                >  2:8457010/1‑93 (MQ=255)

                         tGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAacac                                                                >  1:7527885/1‑93 (MQ=255)

                          gAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACacg                                                               >  1:7125906/1‑93 (MQ=255)

                           aGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACacga                                                              >  2:2079225/1‑93 (MQ=255)

                            ggTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACacgac                                                             >  1:8717240/1‑93 (MQ=255)

                            ggTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACacgac                                                             >  2:4241753/1‑93 (MQ=255)

                             gTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACacgacg                                                            >  1:6072602/1‑93 (MQ=255)

                             gTTTATATAGCAACAAAACGCCGTTAATGTCGGGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCCGTCGTCCGGGGTAACatgaag                                                            >  2:8552169/1‑91 (MQ=255)

                                tATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttc                                                         <  2:3659134/93‑1 (MQ=255)

                                tATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttc                                                         >  1:8492025/1‑93 (MQ=255)

                                tATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttc                                                         <  1:2079219/93‑1 (MQ=255)

                                tATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttc                                                         <  2:6409210/93‑1 (MQ=255)

                                 aTCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttct                                                        <  2:130818/93‑1 (MQ=255)

                                 aTCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttct                                                        >  1:8602266/1‑93 (MQ=255)

                                  tCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttctt                                                       <  2:3992468/93‑1 (MQ=255)

                                  tCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttctt                                                       <  2:8343861/93‑1 (MQ=255)

                                  tCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttctt                                                       <  1:6014375/93‑1 (MQ=255)

                                  accAGCAACAAAACGCGCATAATGCCGAGACCGAGACCACGAGGCCGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGCCGttctt                                                       <  2:7781061/92‑1 (MQ=255)

                                   ccAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttcttc                                                      >  2:625814/1‑93 (MQ=255)

                                   ccAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttcttc                                                      <  1:4298664/93‑1 (MQ=255)

                                   ccAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGttcttc                                                      <  2:5139289/93‑1 (MQ=255)

                                    cAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCg                                                     >  2:7978332/1‑93 (MQ=255)

                                    cAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCg                                                     >  1:1369284/1‑93 (MQ=255)

                                     aGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGt                                                    <  2:7442421/93‑1 (MQ=255)

                                     aGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGt                                                    >  2:6871751/1‑93 (MQ=255)

                                     aGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGt                                                    <  2:4638999/93‑1 (MQ=255)

                                     aGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGt                                                    >  1:7645530/1‑93 (MQ=255)

                                      gCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTc                                                   >  1:5317951/1‑93 (MQ=255)

                                       caacaaAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCa                                                  <  2:4111660/93‑1 (MQ=255)

                                           aaaaCGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGtt                                              >  1:3875144/1‑93 (MQ=255)

                                             aaCGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTg                                            <  2:812741/93‑1 (MQ=255)

                                             aaCGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTg                                            <  1:8115146/93‑1 (MQ=255)

                                             aaCGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTg                                            >  2:3895788/1‑93 (MQ=255)

                                                 ccGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCTTGTTTGACCa                                        >  2:1550110/1‑93 (MQ=255)

                                                 ccGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCa                                        <  2:4800825/93‑1 (MQ=255)

                                                 ccGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCa                                        <  1:6557917/93‑1 (MQ=255)

                                                  cGTTAATGTCGCGGCCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCAc                                       <  1:5144207/93‑1 (MQ=255)

                                                  cGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCAc                                       >  2:6640404/1‑93 (MQ=255)

                                                  cGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCAc                                       <  2:1886611/93‑1 (MQ=255)

                                                     tAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCt                                    <  1:5650046/93‑1 (MQ=255)

                                                       aTGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTgg                                  <  2:8394509/93‑1 (MQ=255)

                                                            gcgaccgcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTGCGTCATGTTTGACCACGCTGGTCAcc                             >  2:7293232/1‑93 (MQ=255)

                                                             cgaccgcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCa                            <  1:7958704/93‑1 (MQ=255)

                                                              gaccgcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAg                           >  2:7070419/1‑93 (MQ=255)

                                                                ccgcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGt                         >  2:5798967/1‑93 (MQ=255)

                                                                 cgcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGtt                        >  2:2840868/1‑93 (MQ=255)

                                                                  gcgacGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGttt                       <  2:7176956/93‑1 (MQ=255)

                                                                    gacgacgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGa                     <  1:3051178/93‑1 (MQ=255)

                                                                      cgacgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACa                   >  1:6364033/1‑93 (MQ=255)

                                                                      cgacgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACa                   <  1:1761758/93‑1 (MQ=255)

                                                                       gacgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACAt                  >  2:2361609/1‑93 (MQ=255)

                                                                       gacgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACAt                  <  2:7728032/93‑1 (MQ=255)

                                                                        acgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATg                 <  1:1222454/93‑1 (MQ=255)

                                                                        acgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATg                 <  1:8246176/93‑1 (MQ=255)

                                                                        acgaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATg                 <  1:7396527/93‑1 (MQ=255)

                                                                          gaGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATgcg               >  2:3078219/1‑93 (MQ=255)

                                                                           aGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATgcgc              >  2:6553775/1‑93 (MQ=255)

                                                                            ggACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCa             >  1:1665152/1‑93 (MQ=255)

                                                                             gacgacTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAt            >  2:3545933/1‑93 (MQ=255)

                                                                             gacgacTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTCCGCCTTGTTTGACCACCCGGGTAACAGGGTTTGACATGCCCac            >  2:4402677/1‑92 (MQ=255)

                                                                                gacTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATccc         <  2:4915200/93‑1 (MQ=255)

                                                                                gacTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATccc         >  2:4490969/1‑93 (MQ=255)

                                                                                gacTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATccc         <  2:3302473/93‑1 (MQ=255)

                                                                                cacTCATTAGCCCTCCTTGCTGTCGGCCGGGTTAACACGACGGTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATccc         <  2:2311688/92‑1 (MQ=255)

                                                                                 acTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCt        <  1:4113492/93‑1 (MQ=255)

                                                                                 acTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCt        >  1:3655949/1‑93 (MQ=255)

                                                                                  cTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCtt       <  1:6570790/93‑1 (MQ=255)

                                                                                     aTTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCaa    <  2:2188259/93‑1 (MQ=255)

                                                                                     aTTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCaa    >  2:6005236/1‑93 (MQ=255)

                                                                                      ttAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAc   >  1:3995061/1‑93 (MQ=255)

                                                                                      ttAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAc   <  1:7326078/93‑1 (MQ=255)

                                                                                      ttAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAc   <  1:2601615/93‑1 (MQ=255)

                                                                                      ttAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAc   >  1:6407677/1‑93 (MQ=255)

                                                                                       tAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAcc  <  1:6721489/93‑1 (MQ=255)

CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC  >  NC_000913/3310332‑3310511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAGAG  >  NC_000913/3310329‑3310515

TTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGC                                                                                               <  SRR4302541.95868/94‑1 (MQ=60)

TTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGC                                                                                               >  SRR4302541.7853731/1‑94 (MQ=60)

 TGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCC                                                                                              >  SRR4302541.1638476/1‑94 (MQ=60)

   gcGCGCATCGTTGCTGGAAATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCT                                                                                            <  SRR4302541.737279/92‑1 (MQ=60)

   CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCATCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCT                                                                                            >  SRR4302541.1506818/1‑94 (MQ=60)

   CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCATCAACAAAACGCCGTTAATGTCGCGACAGCGACGACGAGGACGACTCATTAGCCCT                                                                                            >  SRR4302541.1506819/1‑94 (MQ=60)

   CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCT                                                                                            >  SRR4302541.8517760/1‑94 (MQ=60)

   CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCT                                                                                            <  SRR4302541.3158237/94‑1 (MQ=60)

   CAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCT                                                                                            >  SRR4302541.4661985/1‑94 (MQ=60)

    AGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTC                                                                                           >  SRR4302541.8251782/1‑94 (MQ=60)

    AGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTC                                                                                           >  SRR4302541.1174943/1‑94 (MQ=60)

     GCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCC                                                                                          >  SRR4302541.6952688/1‑94 (MQ=60)

      CGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCT                                                                                         <  SRR4302541.4828454/94‑1 (MQ=60)

      CGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCT                                                                                         <  SRR4302541.6639977/94‑1 (MQ=60)

       GCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTT                                                                                        <  SRR4302541.5517589/94‑1 (MQ=60)

       GCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTT                                                                                        <  SRR4302541.225787/94‑1 (MQ=60)

       GCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTT                                                                                        >  SRR4302541.2409200/1‑94 (MQ=60)

       CCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTT                                                                                        <  SRR4302541.3292301/94‑1 (MQ=60)

        GATCGTTGCTGGACATACCCTGAGTTTTATCAAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTG                                                                                       <  SRR4302541.8786506/94‑1 (MQ=60)

        CATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTG                                                                                       <  SRR4302541.8303263/94‑1 (MQ=60)

         ATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGC                                                                                      >  SRR4302541.2592901/1‑94 (MQ=60)

         ATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGC                                                                                      >  SRR4302541.7038178/1‑94 (MQ=60)

         ATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGC                                                                                      >  SRR4302541.3942806/1‑94 (MQ=60)

         ATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGC                                                                                      <  SRR4302541.1132902/94‑1 (MQ=60)

         ATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATGAGCCCTCCCTGC                                                                                      >  SRR4302541.2592902/1‑94 (MQ=60)

          TCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCT                                                                                     <  SRR4302541.2539869/94‑1 (MQ=60)

          TCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCT                                                                                     <  SRR4302541.5972342/94‑1 (MQ=60)

          TCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCT                                                                                     >  SRR4302541.1424507/1‑94 (MQ=60)

           CGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTG                                                                                    >  SRR4302541.6996955/1‑94 (MQ=60)

            GTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGT                                                                                   <  SRR4302541.3129809/94‑1 (MQ=60)

             TTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTC                                                                                  <  SRR4302541.3182603/94‑1 (MQ=60)

              TGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCG                                                                                 <  SRR4302541.2414008/94‑1 (MQ=60)

               GCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGT                                                                                >  SRR4302541.4832012/1‑94 (MQ=60)

                CTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTC                                                                               >  SRR4302541.8288397/1‑94 (MQ=60)

                 TGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCC                                                                              <  SRR4302541.924375/94‑1 (MQ=60)

                  GGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCG                                                                             >  SRR4302541.3331284/1‑94 (MQ=60)

                  GGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCG                                                                             >  SRR4302541.4110964/1‑94 (MQ=60)

                  GGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCG                                                                             <  SRR4302541.4993277/94‑1 (MQ=60)

                  GGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCG                                                                             <  SRR4302541.1850945/94‑1 (MQ=60)

                  GGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGAGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCG                                                                             >  SRR4302541.3920820/1‑94 (MQ=60)

                   GACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGG                                                                            >  SRR4302541.866377/1‑94 (MQ=60)

                    ACATACCCTGAGGTTTAGCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGG                                                                           <  SRR4302541.2822703/94‑1 (MQ=60)

                     CATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGTCGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGT                                                                          <  SRR4302541.3091497/94‑1 (MQ=60)

                     CATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGT                                                                          >  SRR4302541.8745025/1‑94 (MQ=60)

                      ATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTT                                                                         >  SRR4302541.8331042/1‑94 (MQ=60)

                      ATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTT                                                                         >  SRR4302541.3450265/1‑94 (MQ=60)

                       TACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTA                                                                        >  SRR4302541.2784546/1‑94 (MQ=60)

                       TACCATGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTA                                                                        <  SRR4302541.2901882/94‑1 (MQ=60)

                        ACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAA                                                                       >  SRR4302541.774727/1‑94 (MQ=60)

                        ACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACAACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAA                                                                       >  SRR4302541.6123027/1‑94 (MQ=60)

                         CCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAAC                                                                      >  SRR4302541.4615200/1‑94 (MQ=60)

                         CCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAAC                                                                      >  SRR4302541.7127123/1‑94 (MQ=60)

                           CTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGCCGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACAC                                                                    >  SRR4302541.2029938/1‑94 (MQ=60)

                           CTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACAC                                                                    >  SRR4302541.5170984/1‑94 (MQ=60)

                           CTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACAC                                                                    >  SRR4302541.4083999/1‑94 (MQ=60)

                           CTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACAC                                                                    >  SRR4302541.7608332/1‑94 (MQ=60)

                           CTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACAC                                                                    <  SRR4302541.674860/94‑1 (MQ=60)

                            TGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACG                                                                   <  SRR4302541.8684107/94‑1 (MQ=60)

                            TGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACG                                                                   >  SRR4302541.7201815/1‑94 (MQ=60)

                             TAGGTTTATCCAACAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGA                                                                  <  SRR4302541.3084360/94‑1 (MQ=60)

                             GAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGA                                                                  <  SRR4302541.3084361/94‑1 (MQ=60)

                              AGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGAC                                                                 >  SRR4302541.8810476/1‑94 (MQ=60)

                               GGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACG                                                                <  SRR4302541.8575183/94‑1 (MQ=60)

                               GGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACG                                                                >  SRR4302541.6134605/1‑94 (MQ=60)

                               GGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCACTCCTTGCTGTCGTCCGGGTTAACACGACG                                                                <  SRR4302541.175862/94‑1 (MQ=60)

                                GTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGT                                                               <  SRR4302541.2070890/94‑1 (MQ=60)

                                GTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACCT                                                               >  SRR4302541.7504332/1‑94 (MQ=60)

                                  TTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTC                                                             >  SRR4302541.8583532/1‑94 (MQ=60)

                                   TATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGCCTCATTAGACCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCT                                                            >  SRR4302541.4069406/1‑94 (MQ=60)

                                   TATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCT                                                            >  SRR4302541.8694549/1‑94 (MQ=60)

                                   TATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCT                                                            <  SRR4302541.2099339/94‑1 (MQ=60)

                                    ATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTT                                                           <  SRR4302541.1649866/94‑1 (MQ=60)

                                    ATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTT                                                           <  SRR4302541.1270590/94‑1 (MQ=60)

                                     TCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTC                                                          <  SRR4302541.8102466/94‑1 (MQ=60)

                                     TCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTC                                                          <  SRR4302541.6076007/94‑1 (MQ=60)

                                     TCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTC                                                          <  SRR4302541.5535912/94‑1 (MQ=60)

                                      CCAGCAAGAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         <  SRR4302541.3195897/94‑1 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         <  SRR4302541.6091958/94‑1 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         <  SRR4302541.4341593/94‑1 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         >  SRR4302541.1776724/1‑94 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         >  SRR4302541.1676028/1‑94 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         >  SRR4302541.1382767/1‑94 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         >  SRR4302541.8817560/1‑94 (MQ=60)

                                      CCAGCAACAAAACGCCGTTAATGTCGCGAACGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCG                                                         >  SRR4302541.4475802/1‑94 (MQ=60)

                                       CAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGT                                                        >  SRR4302541.7727021/1‑94 (MQ=60)

                                        AGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTC                                                       >  SRR4302541.5372689/1‑94 (MQ=60)

                                         GCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCA                                                      >  SRR4302541.5248104/1‑94 (MQ=60)

                                         GCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCA                                                      <  SRR4302541.486328/94‑1 (MQ=60)

                                          CAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCAT                                                     <  SRR4302541.2933147/94‑1 (MQ=60)

                                          CAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCAT                                                     >  SRR4302541.7453003/1‑94 (MQ=60)

                                           AACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATG                                                    <  SRR4302541.8100230/94‑1 (MQ=60)

                                           AACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATG                                                    <  SRR4302541.217761/94‑1 (MQ=60)

                                            ACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGT                                                   >  SRR4302541.6469450/1‑94 (MQ=60)

                                             CAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTT                                                  >  SRR4302541.8865334/1‑94 (MQ=60)

                                             CAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTT                                                  <  SRR4302541.6443887/94‑1 (MQ=60)

                                             CAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTT                                                  >  SRR4302541.3914088/1‑94 (MQ=60)

                                             CAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTT                                                  >  SRR4302541.6492/1‑94 (MQ=60)

                                              AAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTT                                                 <  SRR4302541.6158380/94‑1 (MQ=60)

                                              AAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTT                                                 >  SRR4302541.222568/1‑94 (MQ=60)

                                              AAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTT                                                 <  SRR4302541.3747745/94‑1 (MQ=60)

                                              AAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTT                                                 <  SRR4302541.5127359/94‑1 (MQ=60)

                                                AACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGA                                               >  SRR4302541.1622479/1‑94 (MQ=60)

                                                AACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGA                                               <  SRR4302541.8204050/94‑1 (MQ=60)

                                                 ACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGAC                                              <  SRR4302541.8441198/94‑1 (MQ=60)

                                                  CGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACC                                             <  SRR4302541.2783183/94‑1 (MQ=60)

                                                  CGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACC                                             >  SRR4302541.7709591/1‑94 (MQ=60)

                                                   GCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCA                                            >  SRR4302541.972163/1‑94 (MQ=60)

                                                    CCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCAC                                           <  SRR4302541.6624964/94‑1 (MQ=60)

                                                    CCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCAC                                           >  SRR4302541.1449925/1‑94 (MQ=60)

                                                     CGTTAATGTCGCGGCCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACG                                          <  SRR4302541.5197115/94‑1 (MQ=60)

                                                     CGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACG                                          <  SRR4302541.5196881/94‑1 (MQ=60)

                                                     CGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACG                                          >  SRR4302541.8234919/1‑94 (MQ=60)

                                                     CGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACG                                          <  SRR4302541.3737588/94‑1 (MQ=60)

                                                       TTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCT                                        <  SRR4302541.1847970/94‑1 (MQ=60)

                                                        TAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTG                                       <  SRR4302541.5707772/94‑1 (MQ=60)

                                                        TAATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTG                                       >  SRR4302541.5410397/1‑94 (MQ=60)

                                                         AATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGG                                      <  SRR4302541.371845/94‑1 (MQ=60)

                                                         AATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGG                                      >  SRR4302541.2141463/1‑94 (MQ=60)

                                                         AATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGG                                      >  SRR4302541.7446598/1‑94 (MQ=60)

                                                         AATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGG                                      >  SRR4302541.7396735/1‑94 (MQ=60)

                                                         AATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACAACGTTCTTCGTCATGTTTCACCACGCTGG                                      >  SRR4302541.7446599/1‑94 (MQ=60)

                                                          ATGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGT                                     <  SRR4302541.4661714/94‑1 (MQ=60)

                                                           TGTCGCGCCCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTC                                    <  SRR4302541.8541053/94‑1 (MQ=60)

                                                           TGTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTC                                    <  SRR4302541.2352073/94‑1 (MQ=60)

                                                            GTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCA                                   <  SRR4302541.8219672/94‑1 (MQ=60)

                                                            GTCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCA                                   >  SRR4302541.4204562/1‑94 (MQ=60)

                                                             TCGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCAC                                  <  SRR4302541.3165320/94‑1 (MQ=60)

                                                              CGCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACC                                 >  SRR4302541.2289993/1‑94 (MQ=60)

                                                               GCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCA                                <  SRR4302541.7184240/94‑1 (MQ=60)

                                                               CCGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCA                                <  SRR4302541.7582502/94‑1 (MQ=60)

                                                                CGACCGCGACGACGAGGACTACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAG                               <  SRR4302541.6193003/94‑1 (MQ=60)

                                                                CGACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAG                               <  SRR4302541.8046404/94‑1 (MQ=60)

                                                                  ACCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGT                             >  SRR4302541.3132569/1‑94 (MQ=60)

                                                                  ACCCCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGCCGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGT                             <  SRR4302541.6627986/94‑1 (MQ=60)

                                                                   CCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTT                            <  SRR4302541.8101149/94‑1 (MQ=60)

                                                                   CCGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTT                            <  SRR4302541.754524/94‑1 (MQ=60)

                                                                    CGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTT                           <  SRR4302541.2469663/94‑1 (MQ=60)

                                                                    CGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTT                           >  SRR4302541.7754761/1‑94 (MQ=60)

                                                                    CGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTT                           >  SRR4302541.3420833/1‑94 (MQ=60)

                                                                    CGCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTT                           >  SRR4302541.7638972/1‑94 (MQ=60)

                                                                     GCGACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTG                          <  SRR4302541.6264520/94‑1 (MQ=60)

                                                                       GACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGAC                        <  SRR4302541.19082/94‑1 (MQ=60)

                                                                       GACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGAC                        <  SRR4302541.3082058/94‑1 (MQ=60)

                                                                        ACGACGAGGACGACTCATTATCCCTCCTTTCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACA                       >  SRR4302541.8684416/1‑94 (MQ=60)

                                                                        ACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACA                       >  SRR4302541.6429104/1‑94 (MQ=60)

                                                                        ACGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACA                       <  SRR4302541.4884321/94‑1 (MQ=60)

                                                                         CGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACAT                      <  SRR4302541.5219580/94‑1 (MQ=60)

                                                                         CGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACAT                      <  SRR4302541.4009401/94‑1 (MQ=60)

                                                                         CGACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACAT                      <  SRR4302541.1778908/94‑1 (MQ=60)

                                                                           ACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGC                    <  SRR4302541.7475622/94‑1 (MQ=60)

                                                                           ACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGC                    <  SRR4302541.8336009/94‑1 (MQ=60)

                                                                           ACGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGC                    <  SRR4302541.1234422/94‑1 (MQ=60)

                                                                            CGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCG                   >  SRR4302541.6698549/1‑94 (MQ=60)

                                                                            CGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCG                   <  SRR4302541.2412255/94‑1 (MQ=60)

                                                                            CGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCG                   >  SRR4302541.7295223/1‑94 (MQ=60)

                                                                            CGAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCG                   <  SRR4302541.5944846/94‑1 (MQ=60)

                                                                             GAGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGC                  >  SRR4302541.2704135/1‑94 (MQ=60)

                                                                              AGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCA                 <  SRR4302541.4785368/94‑1 (MQ=60)

                                                                              AGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCA                 >  SRR4302541.1681575/1‑94 (MQ=60)

                                                                              AGGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCA                 >  SRR4302541.8737104/1‑94 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                >  SRR4302541.4758648/1‑94 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                <  SRR4302541.4706003/94‑1 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                <  SRR4302541.8411740/94‑1 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                >  SRR4302541.1304121/1‑94 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                >  SRR4302541.611726/1‑94 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                <  SRR4302541.6636914/94‑1 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                >  SRR4302541.4235338/1‑94 (MQ=60)

                                                                               GGACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCAT                <  SRR4302541.6636915/94‑1 (MQ=60)

                                                                                GACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATC               <  SRR4302541.1138124/94‑1 (MQ=60)

                                                                                 ACGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCC              >  SRR4302541.3193430/1‑94 (MQ=60)

                                                                                  CGACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCC             >  SRR4302541.1821102/1‑94 (MQ=60)

                                                                                   GACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCT            >  SRR4302541.8836313/1‑94 (MQ=60)

                                                                                   GACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCT            >  SRR4302541.3693036/1‑94 (MQ=60)

                                                                                    ACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTT           <  SRR4302541.8308941/94‑1 (MQ=60)

                                                                                    ACTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTT           <  SRR4302541.4154122/94‑1 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          >  SRR4302541.1313294/1‑94 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          >  SRR4302541.2298074/1‑94 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          <  SRR4302541.1749875/94‑1 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          >  SRR4302541.6571033/1‑94 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          <  SRR4302541.6578400/94‑1 (MQ=60)

                                                                                     CTCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTC          <  SRR4302541.6638012/94‑1 (MQ=60)

                                                                                      TCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCA         <  SRR4302541.5728288/94‑1 (MQ=60)

                                                                                      TCATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCA         <  SRR4302541.688360/94‑1 (MQ=60)

                                                                                        ATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAC       >  SRR4302541.6473037/1‑94 (MQ=60)

                                                                                        ATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAC       >  SRR4302541.4034622/1‑94 (MQ=60)

                                                                                        ATTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAAC       >  SRR4302541.2894838/1‑94 (MQ=60)

                                                                                         TTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC      >  SRR4302541.8457089/1‑94 (MQ=60)

                                                                                         TTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC      <  SRR4302541.7404310/94‑1 (MQ=60)

                                                                                         TTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC      >  SRR4302541.7654465/1‑94 (MQ=60)

                                                                                         TTAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACC      <  SRR4302541.2627658/94‑1 (MQ=60)

                                                                                          TAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCA     <  SRR4302541.6793216/94‑1 (MQ=60)

                                                                                          TAGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCA     >  SRR4302541.2506872/1‑94 (MQ=60)

                                                                                           AGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAG    <  SRR4302541.976181/94‑1 (MQ=60)

                                                                                           AGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAG    <  SRR4302541.4336714/94‑1 (MQ=60)

                                                                                           AGCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAG    <  SRR4302541.7844715/94‑1 (MQ=60)

                                                                                            GCCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAGA   <  SRR4302541.2860594/94‑1 (MQ=60)

                                                                                             CCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAGAG  <  SRR4302541.3863427/94‑1 (MQ=60)

                                                                                             CCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAGAG  >  SRR4302541.8196056/1‑94 (MQ=60)

TTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATGCGCATCCCTTCAACCAGAG  >  NC_000913/3310329‑3310515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`