Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,362,606 |
A→G |
D722G (GAC→GGC) |
yhcD → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,362,606 | 0 | A | G | 99.6%
| 856.7
/ ‑4.6
| 248 | D722G (GAC→GGC) | yhcD | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (119/128); total (120/128) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.16e-01 |
Only 100 of 258 total aligned reads displayed.
AAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTC > NC_000913/3362516‑3362694
|
aaaTGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCg < 1:5573842/93‑1 (MQ=255)
aaTGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCcggcgg > 2:3412785/1‑93 (MQ=255)
aaTGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCcggcgg > 1:5759094/1‑93 (MQ=255)
aaTGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCcggcgg > 1:6037194/1‑93 (MQ=255)
aTGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCggcggc > 2:244787/1‑93 (MQ=255)
gATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCaa > 1:1573261/1‑93 (MQ=255)
aTCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCaaa > 2:4978273/1‑93 (MQ=255)
tCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCaaaa > 1:5275391/1‑93 (MQ=255)
aaCAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAAc > 1:4578755/1‑93 (MQ=255)
aaCAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAAc > 2:6344946/1‑93 (MQ=255)
aCAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACt < 1:4124438/93‑1 (MQ=255)
aGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGcc > 2:1214544/1‑93 (MQ=255)
aGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGcc < 1:3281766/93‑1 (MQ=255)
aGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGcc > 2:1270203/1‑93 (MQ=255)
aGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGcc < 2:4694485/93‑1 (MQ=255)
ggCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGccc > 1:2579528/1‑93 (MQ=255)
ggCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGccc < 1:5672557/93‑1 (MQ=255)
ggCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGccc > 2:808571/1‑93 (MQ=255)
gCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCa < 2:1978718/93‑1 (MQ=255)
gCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCa > 1:1171831/1‑93 (MQ=255)
gtggtgCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCagag < 1:6176786/93‑1 (MQ=255)
gtggtgCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCagag < 1:520999/93‑1 (MQ=255)
tggtgCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAgg < 1:810659/93‑1 (MQ=255)
ggtgCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGc < 2:237313/93‑1 (MQ=255)
tgCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGt > 2:5961488/1‑93 (MQ=255)
gcagcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGtt < 1:2145707/93‑1 (MQ=255)
cagcagGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTg > 2:2953683/1‑93 (MQ=255)
cagcagGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTg < 1:4366577/93‑1 (MQ=255)
agcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGc < 1:4832425/90‑1 (MQ=255)
agcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGc < 1:2779562/90‑1 (MQ=255)
agcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGc < 2:5663023/90‑1 (MQ=255)
gcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCg < 1:5460183/91‑1 (MQ=255)
gcaGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCg > 2:5986871/3‑93 (MQ=255)
gggAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGAtt > 1:4942662/1‑93 (MQ=255)
ggAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTg < 1:19882/93‑1 (MQ=255)
ggAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTg < 1:4812116/93‑1 (MQ=255)
aaaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGaa < 1:4978273/93‑1 (MQ=255)
aaaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGaa > 2:2192219/1‑93 (MQ=255)
aaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAg > 2:3597466/1‑93 (MQ=255)
aaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAg < 2:3984225/93‑1 (MQ=255)
aaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAg < 2:2350215/93‑1 (MQ=255)
aaGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAg > 1:1036709/1‑93 (MQ=255)
gTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGAt < 2:195361/93‑1 (MQ=255)
tCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATa < 2:6238716/93‑1 (MQ=255)
tCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATa < 2:6439018/93‑1 (MQ=255)
gATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTg > 1:6348250/1‑93 (MQ=255)
gATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTg > 2:55377/1‑93 (MQ=255)
gATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCACAGGCGTTGCGATTGAAGATAGTg > 1:3856283/1‑93 (MQ=255)
aTTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGa > 2:151953/1‑93 (MQ=255)
ttCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGaa > 1:2451944/1‑93 (MQ=255)
ttCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGaa < 2:1773102/93‑1 (MQ=255)
tCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAg < 1:4605528/93‑1 (MQ=255)
tCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAg < 2:266780/93‑1 (MQ=255)
cAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAgg < 1:5298717/93‑1 (MQ=255)
aGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGc < 2:3794851/93‑1 (MQ=255)
aGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGc < 2:3879266/93‑1 (MQ=255)
gTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCa > 1:2088074/1‑93 (MQ=255)
gATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTa < 2:5838012/93‑1 (MQ=255)
aTAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTAt > 1:650156/1‑93 (MQ=255)
aaCACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCt < 1:3408460/93‑1 (MQ=255)
aaCACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCt > 2:534152/1‑93 (MQ=255)
cacaACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGa < 2:5441659/93‑1 (MQ=255)
acaACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGac > 1:4084485/1‑93 (MQ=255)
acaACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGac < 2:3099679/93‑1 (MQ=255)
caACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGaca > 1:1519916/1‑93 (MQ=255)
caACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGaca < 1:3528147/93‑1 (MQ=255)
aaCGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGacaa < 2:4857326/93‑1 (MQ=255)
aaCGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGacaa > 2:4488958/1‑93 (MQ=255)
aaCGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGacaa > 2:2125149/1‑93 (MQ=255)
aCGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGacaac > 2:4146490/1‑93 (MQ=255)
aCGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGAGAGTGAAGGCAACTATCTGacaac > 1:1499550/1‑93 (MQ=255)
ccGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATc > 2:4943701/1‑93 (MQ=255)
ccGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATc < 1:3216658/93‑1 (MQ=255)
gTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAg < 1:4638031/93‑1 (MQ=255)
gTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAg < 1:1948581/93‑1 (MQ=255)
gTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAg > 2:5203679/1‑93 (MQ=255)
gTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAg > 2:2048600/1‑93 (MQ=255)
gTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAg < 2:1019924/93‑1 (MQ=255)
tGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGt < 1:37728/93‑1 (MQ=255)
tGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGt < 1:2027136/93‑1 (MQ=255)
tGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGt < 1:4261400/93‑1 (MQ=255)
gCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTg < 2:5728514/93‑1 (MQ=255)
tACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATg < 1:3009519/93‑1 (MQ=255)
aCTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGa < 1:1696280/93‑1 (MQ=255)
cTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGAc < 1:5849325/93‑1 (MQ=255)
cTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGAc < 1:4319713/93‑1 (MQ=255)
tCAATATCACACTTGCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACg < 1:3918124/93‑1 (MQ=255)
aaTATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgt < 2:2495328/93‑1 (MQ=255)
aaTATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgt < 1:24764/93‑1 (MQ=255)
aaTATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgt > 2:6041606/1‑93 (MQ=255)
atatCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgtg < 2:2829172/93‑1 (MQ=255)
tatCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgtgt > 2:3241402/1‑93 (MQ=255)
tatCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGgtgt > 1:2846424/1‑93 (MQ=255)
atCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGtgtt < 2:1755689/93‑1 (MQ=255)
atCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGtgtt < 2:1497911/93‑1 (MQ=255)
tCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGtgttg > 1:3981900/1‑93 (MQ=255)
acTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGGGTTGTAtt > 2:941574/1‑93 (MQ=255)
cTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTc < 2:1693006/93‑1 (MQ=255)
ttCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCt < 2:3309823/93‑1 (MQ=255)
ttCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCt < 1:5933822/93‑1 (MQ=255)
|
AAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTC > NC_000913/3362516‑3362694
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATA > NC_000913/3362514‑3362698
|
AAAAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGC > SRR4302534.393300/1‑94 (MQ=60)
AAAAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGC > SRR4302534.3398215/1‑94 (MQ=60)
AAAAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGC > SRR4302534.4601574/1‑94 (MQ=60)
AAAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCG < SRR4302534.1201918/94‑1 (MQ=60)
AAAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCG < SRR4302534.5586666/94‑1 (MQ=60)
AAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGG > SRR4302534.5915308/1‑94 (MQ=60)
AAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGG < SRR4302534.3749496/94‑1 (MQ=60)
AAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGG > SRR4302534.6201267/1‑94 (MQ=60)
AAATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGG < SRR4302534.5724385/94‑1 (MQ=60)
AATGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGC > SRR4302534.6285381/1‑94 (MQ=60)
TGATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAA > SRR4302534.1614452/1‑94 (MQ=60)
ATCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAA > SRR4302534.5417853/1‑94 (MQ=60)
TCAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAA > SRR4302534.6082588/1‑94 (MQ=60)
CAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAA > SRR4302534.4737010/1‑94 (MQ=60)
CAAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAA < SRR4302534.829551/94‑1 (MQ=60)
AAACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAAC > SRR4302534.4702943/1‑94 (MQ=60)
ACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTG < SRR4302534.2109124/94‑1 (MQ=60)
ACAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTG < SRR4302534.4235456/94‑1 (MQ=60)
CAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGC < SRR4302534.2730523/94‑1 (MQ=60)
CAAGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGC > SRR4302534.2532754/1‑94 (MQ=60)
AGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCC > SRR4302534.4238204/1‑94 (MQ=60)
AGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCC < SRR4302534.3369237/94‑1 (MQ=60)
AGGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCC > SRR4302534.2647846/1‑94 (MQ=60)
GGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCA > SRR4302534.1202634/1‑94 (MQ=60)
GGCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCA < SRR4302534.5826144/94‑1 (MQ=60)
GCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAG > SRR4302534.4962351/1‑94 (MQ=60)
GCCGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAG > SRR4302534.4222896/1‑94 (MQ=60)
CGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAG > SRR4302534.5000267/1‑94 (MQ=60)
CGTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAG > SRR4302534.5830747/1‑94 (MQ=60)
GTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGG > SRR4302534.2187670/1‑94 (MQ=60)
GTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGG < SRR4302534.533951/94‑1 (MQ=60)
GTGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGG < SRR4302534.6344878/94‑1 (MQ=60)
GTGGCGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGG > SRR4302534.3347261/1‑94 (MQ=60)
TGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGC < SRR4302534.6154277/94‑1 (MQ=60)
TGGTGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGC < SRR4302534.831032/94‑1 (MQ=60)
TGCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTT < SRR4302534.3430315/94‑1 (MQ=60)
GCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTG < SRR4302534.2202333/94‑1 (MQ=60)
GCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTG < SRR4302534.6291773/94‑1 (MQ=60)
GCAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTG > SRR4302534.5825681/1‑94 (MQ=60)
CAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGC > SRR4302534.5684082/1‑94 (MQ=60)
CAGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGC < SRR4302534.4484281/94‑1 (MQ=60)
AGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCG < SRR4302534.2852668/94‑1 (MQ=60)
AGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCG > SRR4302534.5977758/1‑94 (MQ=60)
AGCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCG < SRR4302534.4963529/94‑1 (MQ=60)
GCAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGA < SRR4302534.5607347/94‑1 (MQ=60)
CAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGAT < SRR4302534.4675508/94‑1 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT < SRR4302534.3086977/94‑1 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT > SRR4302534.6351174/1‑94 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT > SRR4302534.506064/1‑94 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT > SRR4302534.5076570/1‑94 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT < SRR4302534.162166/94‑1 (MQ=60)
AGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATT > SRR4302534.1480938/1‑94 (MQ=60)
GGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTG < SRR4302534.2919202/94‑1 (MQ=60)
GGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTG > SRR4302534.5941671/1‑94 (MQ=60)
GGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTG < SRR4302534.1554026/94‑1 (MQ=60)
GGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGA < SRR4302534.4942758/94‑1 (MQ=60)
GGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGA < SRR4302534.20405/94‑1 (MQ=60)
GGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGA < SRR4302534.5545703/94‑1 (MQ=60)
AAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAG < SRR4302534.5113021/94‑1 (MQ=60)
AAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAG > SRR4302534.1063461/1‑94 (MQ=60)
AAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAG > SRR4302534.3294248/1‑94 (MQ=60)
AAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGA > SRR4302534.5201927/1‑94 (MQ=60)
AGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGAT > SRR4302534.1819559/1‑94 (MQ=60)
GTCGGATTCAGTGCGATAATACAACGCCGGGCATTCCTCAAAATAAAACTTTCCGGCGGCAAAAAACTCCCCAAAGGCGTTCCGATTGAAAATA > SRR4302534.214855/1‑94 (MQ=34)
GTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATA > SRR4302534.5315018/1‑94 (MQ=60)
GTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATA < SRR4302534.2092447/94‑1 (MQ=60)
GTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATA < SRR4302534.2589530/94‑1 (MQ=60)
TCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAG > SRR4302534.207781/1‑94 (MQ=60)
CGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGT > SRR4302534.769412/1‑94 (MQ=60)
CGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGT > SRR4302534.4759561/1‑94 (MQ=60)
GGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTG > SRR4302534.6519701/1‑94 (MQ=60)
GGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCACAGGCGTTGCGATTGAAGATAGTG > SRR4302534.3959811/1‑94 (MQ=60)
ATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAA > SRR4302534.376475/1‑94 (MQ=60)
ATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAA > SRR4302534.2517093/1‑94 (MQ=60)
ATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATACCACTTTCCGGCGGCAAAAAACTCCCCAGAGGGGTTGCGATTGAcaaaagtaag > SRR4302534.303695/1‑84 (MQ=60)
TTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAG < SRR4302534.1791600/94‑1 (MQ=60)
TCAGTGCGATAACTCAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGG < SRR4302534.1336945/94‑1 (MQ=60)
TCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGG < SRR4302534.4730504/94‑1 (MQ=60)
CAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGC < SRR4302534.5441712/94‑1 (MQ=60)
CAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGC > SRR4302534.2206867/1‑94 (MQ=60)
AGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCA > SRR4302534.2142802/1‑94 (MQ=60)
AGTGCGATAACACAAAGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCA > SRR4302534.4025963/1‑94 (MQ=60)
GTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAA < SRR4302534.1606730/94‑1 (MQ=60)
GCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACT < SRR4302534.6611656/94‑1 (MQ=60)
CGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTA > SRR4302534.4146716/1‑94 (MQ=60)
GATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTAT > SRR4302534.665929/1‑94 (MQ=60)
ATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATC > SRR4302534.4403543/1‑94 (MQ=60)
AACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTG < SRR4302534.3500008/94‑1 (MQ=60)
ACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGA < SRR4302534.5357104/94‑1 (MQ=60)
ACACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGA > SRR4302534.3916742/1‑94 (MQ=60)
CACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGAC > SRR4302534.1561094/1‑94 (MQ=60)
CACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGAC > SRR4302534.4194156/1‑94 (MQ=60)
ACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACA > SRR4302534.5362359/1‑94 (MQ=60)
ACAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACA > SRR4302534.1559829/1‑94 (MQ=60)
CAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAA < SRR4302534.4218172/94‑1 (MQ=60)
CAACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAA < SRR4302534.3623051/94‑1 (MQ=60)
AACGCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGAGAGTGAAGGCAACTATCTGACAAC > SRR4302534.1539014/1‑94 (MQ=60)
GCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATC > SRR4302534.4718036/1‑94 (MQ=60)
GCCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATC < SRR4302534.4626232/94‑1 (MQ=60)
CCGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCA < SRR4302534.3302038/94‑1 (MQ=60)
CGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAG < SRR4302534.4767077/94‑1 (MQ=60)
CGTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAG < SRR4302534.437650/94‑1 (MQ=60)
GTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGT < SRR4302534.1999584/94‑1 (MQ=60)
GTGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGT < SRR4302534.4763879/94‑1 (MQ=60)
TGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTG < SRR4302534.2080159/94‑1 (MQ=60)
TGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTG < SRR4302534.38734/94‑1 (MQ=60)
TGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTG < SRR4302534.4376497/94‑1 (MQ=60)
TGCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTG < SRR4302534.3990643/94‑1 (MQ=60)
TGCATTACTCAATATCACACTCTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTG < SRR4302534.4093790/94‑1 (MQ=60)
GCATTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGG > SRR4302534.3079358/1‑94 (MQ=60)
TTACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATG < SRR4302534.5441044/94‑1 (MQ=60)
TACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGA < SRR4302534.3088268/94‑1 (MQ=60)
ACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGAC < SRR4302534.6535934/94‑1 (MQ=60)
ACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGAC > SRR4302534.1152366/1‑94 (MQ=60)
ACTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGAC < SRR4302534.1740366/94‑1 (MQ=60)
CTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACG < SRR4302534.6008154/94‑1 (MQ=60)
CTCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACG < SRR4302534.4436649/94‑1 (MQ=60)
TCAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGG > SRR4302534.6051314/1‑94 (MQ=60)
TCAATATCACACTTGCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGG < SRR4302534.4023140/94‑1 (MQ=60)
CAATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGT < SRR4302534.447365/94‑1 (MQ=60)
AATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTG < SRR4302534.25415/94‑1 (MQ=60)
AATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTG > SRR4302534.4856430/1‑94 (MQ=60)
ATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGT < SRR4302534.2024713/94‑1 (MQ=60)
ATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGT > SRR4302534.2921209/1‑94 (MQ=60)
ATATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGT < SRR4302534.2553275/94‑1 (MQ=60)
TATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTT < SRR4302534.5775227/94‑1 (MQ=60)
TATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTT > SRR4302534.2035078/1‑94 (MQ=60)
ATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTG > SRR4302534.4088453/1‑94 (MQ=60)
ATCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTG > SRR4302534.2375416/1‑94 (MQ=60)
TCACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGT < SRR4302534.3983751/94‑1 (MQ=60)
CCACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTAT < SRR4302534.3317828/94‑1 (MQ=60)
ACACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTAT < SRR4302534.3456769/94‑1 (MQ=60)
CACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATT < SRR4302534.5107991/94‑1 (MQ=60)
ACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTC < SRR4302534.3566625/94‑1 (MQ=60)
ACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTC < SRR4302534.2666312/94‑1 (MQ=60)
ACTTTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTC > SRR4302534.5607089/1‑94 (MQ=60)
TTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTC < SRR4302534.6094966/94‑1 (MQ=60)
TTCCGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTC < SRR4302534.982985/94‑1 (MQ=60)
CGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAAT < SRR4302534.1636117/94‑1 (MQ=60)
CGGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGGGTTGTATTCCTCAAT > SRR4302534.3977895/1‑94 (MQ=60)
GGCGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATA > SRR4302534.1864501/1‑94 (MQ=60)
|
AAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATA > NC_000913/3362514‑3362698
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
