Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,461,794 |
C→T |
T80I (ACA→ATA) |
yheK → |
putative export protein K |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,461,794 | 0 | C | T | 99.6%
| 1018.2
/ NA
| 260 | T80I (ACA→ATA) | yheK | putative export protein K |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (121/138); minor base G (1/0); total (122/138) |
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 268 total aligned reads displayed.
CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGG > NC_000913/3461704‑3461883
|
ccGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAatat > 1:937744/1‑93 (MQ=255)
cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt < 2:1713339/93‑1 (MQ=255)
cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt > 2:5683906/1‑93 (MQ=255)
cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt < 1:4789429/93‑1 (MQ=255)
cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt < 2:6281795/93‑1 (MQ=255)
ggAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTa > 2:1190179/1‑93 (MQ=255)
gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc < 1:6251676/93‑1 (MQ=255)
gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc > 2:3416636/1‑93 (MQ=255)
gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc > 1:5468075/1‑93 (MQ=255)
gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTAACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc > 1:5289978/1‑93 (MQ=255)
aaaTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACa < 1:4734737/93‑1 (MQ=255)
aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt < 2:1368148/93‑1 (MQ=255)
aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt < 1:5810241/93‑1 (MQ=255)
aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt < 2:1226565/93‑1 (MQ=255)
tGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtg < 1:3276695/93‑1 (MQ=255)
tGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCAAGCTGCCCAACGCCAAATACACACTCACCGCACAAATATTACAAtg > 1:6342533/1‑93 (MQ=255)
ttCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggc > 2:3873918/1‑93 (MQ=255)
tCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggct < 1:4097969/93‑1 (MQ=255)
tCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggct < 2:199369/93‑1 (MQ=255)
cATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggctg > 2:2497197/1‑93 (MQ=255)
cTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCa < 2:2643915/93‑1 (MQ=255)
tttGAGCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAACCTCTCCGCACAAATATTACAATCGCTGGCaga < 1:2617523/93‑1 (MQ=255)
tGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgagg > 1:2890772/1‑93 (MQ=255)
aTCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgaggag > 1:6115868/1‑93 (MQ=255)
aTCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgaggag < 1:3813909/93‑1 (MQ=255)
tCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGgaga > 2:5295902/1‑93 (MQ=255)
cccACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAc > 1:2088808/1‑93 (MQ=255)
caccaGAGGGCCTTTTATATCTTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGt < 1:4591595/93‑1 (MQ=255)
accaGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGtt > 2:4999242/1‑93 (MQ=255)
accaGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGtt > 1:2587518/1‑93 (MQ=255)
caGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAc < 1:3490179/93‑1 (MQ=255)
gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc > 1:2511306/1‑93 (MQ=255)
gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc > 2:6075194/1‑93 (MQ=255)
gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc > 1:2467554/1‑93 (MQ=255)
agGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACACg > 1:2258623/1‑93 (MQ=255)
gCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGaca > 2:610781/1‑93 (MQ=255)
ccTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaa > 1:5987078/1‑93 (MQ=255)
cTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaac < 2:2260213/93‑1 (MQ=255)
cTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaac > 2:3016307/1‑93 (MQ=255)
ttttATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaaca > 2:2063631/1‑93 (MQ=255)
ttttATATCGTTCCCTCACGCTGCCCAACGCCAAACACAAACACACCGCACAAAGACTACAATGGCAGGCAGAGGAGACGTTACCCGacaaca > 2:6472485/1‑93 (MQ=255)
tatCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAg > 1:4211119/1‑93 (MQ=255)
atCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAgg > 1:535915/1‑93 (MQ=255)
atCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAgg > 1:5711535/1‑93 (MQ=255)
tCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGa < 2:54230/93‑1 (MQ=255)
cGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGAc < 2:2967420/93‑1 (MQ=255)
gTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACt < 2:5224151/93‑1 (MQ=255)
ttCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAAGTTACCCGACAACACCCAGGACTg > 1:4492764/1‑93 (MQ=255)
tCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTgg < 2:1485034/93‑1 (MQ=255)
tCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTgg > 2:5640562/1‑93 (MQ=255)
ccTCGCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGCCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCa > 1:996607/1‑93 (MQ=255)
cTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCAc < 1:6439318/93‑1 (MQ=255)
cTCACGCTGCCCAACGCAAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCAc < 1:1117558/93‑1 (MQ=255)
tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt < 1:847304/93‑1 (MQ=255)
tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt > 2:4288386/1‑93 (MQ=255)
tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt > 2:702748/1‑93 (MQ=255)
cACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACGCCCAGGACTGGCACTg < 1:2383561/93‑1 (MQ=255)
cACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTg > 2:158389/1‑93 (MQ=255)
aCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTgg < 2:1090044/93‑1 (MQ=255)
aCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTgg > 1:2130769/1‑93 (MQ=255)
cGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGa > 2:4919631/1‑93 (MQ=255)
cGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGa > 1:3654426/1‑93 (MQ=255)
cTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACg > 1:4353772/1‑93 (MQ=255)
cTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACg < 1:3211248/93‑1 (MQ=255)
tGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACgg < 2:5131520/93‑1 (MQ=255)
gCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGt < 1:560769/93‑1 (MQ=255)
gCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGt < 2:443240/93‑1 (MQ=255)
cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt < 1:4930400/93‑1 (MQ=255)
cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt < 1:5228723/93‑1 (MQ=255)
cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt < 2:1116677/93‑1 (MQ=255)
cccAACGCAAAATACAACCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt < 1:5495918/93‑1 (MQ=255)
ccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTg < 2:3709295/93‑1 (MQ=255)
ccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACCGGACGGTTg > 1:3977832/1‑93 (MQ=255)
aaCGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTc < 2:5872378/93‑1 (MQ=255)
aaCGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTc < 2:2770338/93‑1 (MQ=255)
ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa < 2:1650205/93‑1 (MQ=255)
ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa < 1:4462741/93‑1 (MQ=255)
ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa > 1:1705703/1‑93 (MQ=255)
cAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATaa > 2:843674/1‑93 (MQ=255)
aaTACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAAc > 1:794333/1‑93 (MQ=255)
aCAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACaaa > 1:1403579/1‑93 (MQ=255)
aCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGa > 2:4326741/1‑93 (MQ=255)
cTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGaa < 1:1903700/93‑1 (MQ=255)
tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGaaa > 1:1967902/1‑93 (MQ=255)
tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTCGTCGATAAACAAAACGaaa > 2:4619898/1‑93 (MQ=255)
tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGGTGTCGATAAACAAAACGaaa > 1:102522/1‑93 (MQ=255)
cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg < 2:2614508/93‑1 (MQ=255)
cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg > 1:892921/1‑93 (MQ=255)
cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg > 2:5319174/1‑93 (MQ=255)
aCCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgt < 1:4855096/93‑1 (MQ=255)
ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtg > 2:3953357/1‑93 (MQ=255)
ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtg > 1:1205802/1‑93 (MQ=255)
ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgag > 1:3941663/1‑91 (MQ=255)
cGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtgt < 2:914584/93‑1 (MQ=255)
cGCACAAATATGACAATGGCTGTCAGAGGAGACGTTACCCGACAACTCCCAGGACTGGCACTGGACGTTTGTCGATAAACAAAACGAAAgtgt < 1:1438404/93‑1 (MQ=255)
gCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTc > 1:357127/1‑93 (MQ=255)
acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa < 1:1860739/93‑1 (MQ=255)
acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa > 2:5076693/1‑93 (MQ=255)
acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa > 2:4194794/1‑93 (MQ=255)
acaAAGATGACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa < 1:4419295/93‑1 (MQ=255)
|
CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGG > NC_000913/3461704‑3461883
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGAT > NC_000913/3461702‑3461887
|
TGCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATA > SRR4302534.1077979/1‑94 (MQ=60)
GCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAT > SRR4302534.961595/1‑94 (MQ=60)
GCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAT < SRR4302534.1472361/94‑1 (MQ=60)
CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATT > SRR4302534.2018038/1‑94 (MQ=60)
CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATT < SRR4302534.1947520/94‑1 (MQ=60)
CGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTA < SRR4302534.4919473/94‑1 (MQ=60)
GGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAC > SRR4302534.5615465/1‑94 (MQ=60)
GGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTAACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAC > SRR4302534.5432767/1‑94 (MQ=60)
GAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACA < SRR4302534.3372069/94‑1 (MQ=60)
GAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACA < SRR4302534.6421173/94‑1 (MQ=60)
AAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAA < SRR4302534.4863292/94‑1 (MQ=60)
AAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAA > SRR4302534.1446107/1‑94 (MQ=60)
AAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAA > SRR4302534.1761031/1‑94 (MQ=60)
ATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATG < SRR4302534.5967934/94‑1 (MQ=60)
ATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATG > SRR4302534.5728906/1‑94 (MQ=60)
ATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCAAGCTGCCCAACGCCAAATACACACTCACCGCACAAATATTACAATG > SRR4302534.6513832/1‑94 (MQ=60)
TGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGG < SRR4302534.3364021/94‑1 (MQ=60)
TGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGG < SRR4302534.2136740/94‑1 (MQ=60)
GTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGC < SRR4302534.121364/94‑1 (MQ=60)
TTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCT < SRR4302534.4573982/94‑1 (MQ=60)
TTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCT > SRR4302534.1138019/1‑94 (MQ=60)
TCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTG > SRR4302534.2542769/1‑94 (MQ=60)
TCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTG < SRR4302534.4208138/94‑1 (MQ=60)
TCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTG < SRR4302534.5395198/94‑1 (MQ=60)
CATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGG < SRR4302534.3744487/94‑1 (MQ=60)
TCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCA < SRR4302534.207398/94‑1 (MQ=60)
CTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAG < SRR4302534.5286367/94‑1 (MQ=60)
TTTGAGCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAACCTCTCCGCACAAATATTACAATCGCTGGCAGAG < SRR4302534.2686798/94‑1 (MQ=60)
TTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGG > SRR4302534.2966631/1‑94 (MQ=60)
TGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGA > SRR4302534.3897226/1‑94 (MQ=60)
GATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAG > SRR4302534.6282240/1‑94 (MQ=60)
ATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGA < SRR4302534.3916348/94‑1 (MQ=60)
TCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAC > SRR4302534.4992556/1‑94 (MQ=60)
TCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAC > SRR4302534.2143568/1‑94 (MQ=60)
TCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAC > SRR4302534.2177551/1‑94 (MQ=60)
TCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAC < SRR4302534.3635602/94‑1 (MQ=60)
CCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACG < SRR4302534.6051539/94‑1 (MQ=60)
CCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACG > SRR4302534.132566/1‑94 (MQ=60)
CCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGT > SRR4302534.3224279/1‑94 (MQ=60)
CACCAGAGGGCCTTTTATATCTTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTT < SRR4302534.4716203/94‑1 (MQ=60)
CACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTT > SRR4302534.2656014/1‑94 (MQ=60)
CACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTT > SRR4302534.4599887/1‑94 (MQ=60)
CACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTT < SRR4302534.4557283/94‑1 (MQ=60)
CACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTT < SRR4302534.837352/94‑1 (MQ=60)
ACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTA > SRR4302534.6423382/1‑94 (MQ=60)
ACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTA > SRR4302534.4532753/1‑94 (MQ=60)
CCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAC < SRR4302534.2584711/94‑1 (MQ=60)
CAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACC < SRR4302534.3583988/94‑1 (MQ=60)
AGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCC > SRR4302534.2533151/1‑94 (MQ=60)
AGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCC > SRR4302534.2577981/1‑94 (MQ=60)
AGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCC > SRR4302534.5517404/1‑94 (MQ=60)
GAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCG < SRR4302534.1321471/94‑1 (MQ=60)
GAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCG > SRR4302534.4974009/1‑94 (MQ=60)
GAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCG < SRR4302534.2829478/94‑1 (MQ=60)
GAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACACG > SRR4302534.2318502/1‑94 (MQ=60)
AGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGA < SRR4302534.2630311/94‑1 (MQ=60)
GCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAA > SRR4302534.6149714/1‑94 (MQ=60)
TTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACC < SRR4302534.739184/94‑1 (MQ=60)
TTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACC > SRR4302534.227223/1‑94 (MQ=60)
TTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCC > SRR4302534.2412778/1‑94 (MQ=60)
TTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCC < SRR4302534.5346700/94‑1 (MQ=60)
ATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAG > SRR4302534.4324724/1‑94 (MQ=60)
ATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAG > SRR4302534.5036796/1‑94 (MQ=60)
TATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCCGG > SRR4302534.913621/1‑94 (MQ=60)
TATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGG > SRR4302534.549206/1‑94 (MQ=60)
TATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGG > SRR4302534.5866265/1‑94 (MQ=60)
ATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGA > SRR4302534.3936916/1‑94 (MQ=60)
ATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCCACAACACCCAGGA > SRR4302534.1512279/1‑94 (MQ=60)
CGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACT < SRR4302534.4900277/94‑1 (MQ=60)
CGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACT > SRR4302534.2674814/1‑94 (MQ=60)
GTTCCCTCCCGCTGCCCAACGCCAAATACAAACTCACCGCACATATATTACAATGGCTGGCAGAGTAGACGTTACCCGACAACACCCAGGACTG < SRR4302534.6350737/94‑1 (MQ=60)
GTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAAGTTACCCGACAACACCCAGGACTG > SRR4302534.4614335/1‑94 (MQ=60)
TCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGC > SRR4302534.5743362/1‑94 (MQ=60)
CCCTCGCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGCCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCA > SRR4302534.1022138/1‑94 (MQ=60)
CTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACT < SRR4302534.4059709/94‑1 (MQ=60)
CTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACT < SRR4302534.4059707/94‑1 (MQ=60)
CTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACT > SRR4302534.3826729/1‑94 (MQ=60)
CTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACT < SRR4302534.6612858/94‑1 (MQ=60)
CTCACGCTGCCCAACGCAAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACT < SRR4302534.1146743/94‑1 (MQ=60)
TCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTG < SRR4302534.868661/94‑1 (MQ=60)
TCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTG > SRR4302534.5453488/1‑94 (MQ=60)
TCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTG < SRR4302534.4587297/94‑1 (MQ=60)
CACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACGCCCAGGACTGGCACTGG < SRR4302534.2446898/94‑1 (MQ=60)
CACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGG < SRR4302534.6573572/94‑1 (MQ=60)
CACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGG > SRR4302534.4754776/1‑94 (MQ=60)
CACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGG > SRR4302534.2186902/1‑94 (MQ=60)
ACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGA > SRR4302534.3752631/1‑94 (MQ=60)
GCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACG > SRR4302534.4471298/1‑94 (MQ=60)
GCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACG < SRR4302534.931538/94‑1 (MQ=60)
CTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGG < SRR4302534.3296460/94‑1 (MQ=60)
TGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGT > SRR4302534.4674337/1‑94 (MQ=60)
GCCCAAGGCCAAATACAAACTCACCGCACAAATATTACAATGGCGGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTT < SRR4302534.5638410/94‑1 (MQ=60)
GCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTT < SRR4302534.6488183/94‑1 (MQ=60)
GCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTT < SRR4302534.778214/94‑1 (MQ=60)
GCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTT < SRR4302534.574570/94‑1 (MQ=60)
CCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTG < SRR4302534.5064028/94‑1 (MQ=60)
CCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTG < SRR4302534.5369882/94‑1 (MQ=60)
CCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTG > SRR4302534.5959761/1‑94 (MQ=60)
CCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACCGGACGGTTG > SRR4302534.4084279/1‑94 (MQ=60)
CCCAACGCAAAATACAACCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTG < SRR4302534.5644126/94‑1 (MQ=60)
CAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTG > SRR4302534.223561/1‑94 (MQ=60)
AACGCCAAATACAACCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCG < SRR4302534.6272779/94‑1 (MQ=60)
AACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCG > SRR4302534.5804632/1‑94 (MQ=60)
AACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACGGGCACTGGACGGTTGTCG > SRR4302534.1223708/1‑94 (MQ=60)
ACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGA > SRR4302534.335219/1‑94 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA < SRR4302534.2018511/94‑1 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA > SRR4302534.1750021/1‑94 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA < SRR4302534.554475/94‑1 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA > SRR4302534.4153179/1‑94 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA > SRR4302534.2542013/1‑94 (MQ=60)
GCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATA > SRR4302534.4407666/1‑94 (MQ=60)
CCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAA < SRR4302534.4583404/94‑1 (MQ=60)
CCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAA < SRR4302534.4347975/94‑1 (MQ=60)
CCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAA > SRR4302534.2394400/1‑94 (MQ=60)
CAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAA < SRR4302534.1011856/94‑1 (MQ=60)
AAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAAC > SRR4302534.814259/1‑94 (MQ=60)
AATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACA < SRR4302534.4289187/94‑1 (MQ=60)
TACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAA > SRR4302534.1440490/1‑94 (MQ=60)
CAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAAC < SRR4302534.5473200/94‑1 (MQ=60)
AACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGA > SRR4302534.311734/1‑94 (MQ=60)
AACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGA < SRR4302534.5977690/94‑1 (MQ=60)
CTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAA > SRR4302534.2019417/1‑94 (MQ=60)
CTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAA < SRR4302534.1953355/94‑1 (MQ=60)
CTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGGTGTCGATAAACAAAACGAAA > SRR4302534.105261/1‑94 (MQ=60)
TCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAG > SRR4302534.4774332/1‑94 (MQ=60)
TCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAG > SRR4302534.915542/1‑94 (MQ=60)
TCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAG < SRR4302534.956379/94‑1 (MQ=60)
CACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGT < SRR4302534.4032299/94‑1 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTG < SRR4302534.5785182/94‑1 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTG > SRR4302534.4880281/1‑94 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTG < SRR4302534.3497572/94‑1 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTG < SRR4302534.4986820/94‑1 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTG > SRR4302534.1237533/1‑94 (MQ=60)
ACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGAG > SRR4302534.4047223/1‑94 (MQ=60)
CCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGT < SRR4302534.4299754/94‑1 (MQ=60)
CGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTC > SRR4302534.366258/1‑94 (MQ=60)
CGCACAAATATGACAATGGCTGTCAGAGGAGACGTTACCCGACAACTCCCAGGACTGGCACTGGACGTTTGTCGATAAACAAAACGAAAGTGTC < SRR4302534.1476271/94‑1 (MQ=60)
GCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCG < SRR4302534.6169457/94‑1 (MQ=60)
GCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCG < SRR4302534.6585870/94‑1 (MQ=60)
GCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCG > SRR4302534.1511908/1‑94 (MQ=60)
CCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCG < SRR4302534.3655110/94‑1 (MQ=60)
CACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGA > SRR4302534.2517509/1‑94 (MQ=60)
CACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGA < SRR4302534.1790046/94‑1 (MQ=60)
ACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAG < SRR4302534.1909168/94‑1 (MQ=60)
ACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAG < SRR4302534.883843/94‑1 (MQ=60)
ACAAAGATGACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAG < SRR4302534.4538609/94‑1 (MQ=60)
CAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGG > SRR4302534.2870043/1‑94 (MQ=60)
AAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGT > SRR4302534.37088/1‑94 (MQ=60)
AATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTG > SRR4302534.1496444/1‑94 (MQ=60)
AATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTG > SRR4302534.706609/1‑94 (MQ=60)
ATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGA > SRR4302534.5602713/1‑94 (MQ=60)
ATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGA < SRR4302534.5135897/94‑1 (MQ=60)
ATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGA < SRR4302534.5173903/94‑1 (MQ=60)
TATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGAT > SRR4302534.891300/1‑94 (MQ=60)
TATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGAT > SRR4302534.3946831/1‑94 (MQ=60)
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TGCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGAT > NC_000913/3461702‑3461887
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
