Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,464,165 T→C E66E (GAA→GAG)  bfr ← bacterioferrin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,464,1650TC99.7% 1208.7 / ‑5.2 347E66E (GAA→GAG) bfrbacterioferrin
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (179/167);  total (179/168)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01

Only 100 of 356 total aligned reads displayed.

CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG  >  NC_000913/3464074‑3464254
                                                                                           |                                                                                         
cATCCAGCTCAAGTACCAGATCAGAACGCAGCATTTACTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCtt                                                                                          <  1:4839786/93‑1 (MQ=255)
 aTCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTc                                                                                         >  1:4467452/1‑93 (MQ=255)
 aTCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCATCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTc                                                                                         >  1:4926226/1‑93 (MQ=255)
   ccAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCa                                                                                       <  1:8483989/93‑1 (MQ=255)
    cAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAg                                                                                      >  1:1140556/1‑93 (MQ=255)
    cAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAg                                                                                      >  2:2155026/1‑93 (MQ=255)
     aGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGa                                                                                     >  2:340332/1‑93 (MQ=255)
       cTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaa                                                                                   >  1:2384468/1‑93 (MQ=255)
         taaGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaaa                                                                                 <  2:6317198/92‑1 (MQ=255)
         cAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaaa                                                                                 <  1:6744398/93‑1 (MQ=255)
          aaGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAg                                                                                <  1:8638763/93‑1 (MQ=255)
            gTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGaa                                                                              <  2:6395858/93‑1 (MQ=255)
             tGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAt                                                                             >  1:1045782/1‑93 (MQ=255)
                cAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATgcg                                                                          >  2:2086089/1‑93 (MQ=255)
                  gATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCt                                                                        >  2:8333189/1‑93 (MQ=255)
                  gATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCt                                                                        >  2:6752283/1‑93 (MQ=255)
                  gATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCt                                                                        >  1:561758/1‑93 (MQ=255)
                   aTCAGAACGCAGGATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTc                                                                       >  2:860041/1‑93 (MQ=255)
                   aTCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTc                                                                       >  2:3782302/1‑93 (MQ=255)
                    tCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCa                                                                      >  1:8681014/1‑93 (MQ=255)
                    tCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCa                                                                      >  2:4236891/1‑93 (MQ=255)
                      aGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAat                                                                    <  1:4331596/93‑1 (MQ=255)
                      aGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAat                                                                    <  2:233315/93‑1 (MQ=255)
                       gAACGCAGCATTTCCTCAACCTCTTCACCAATGTGCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGGCCCTCCAGAAAAAGAATGCGCTCAata                                                                   <  1:4233837/93‑1 (MQ=255)
                       gAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAata                                                                   >  2:4482969/1‑93 (MQ=255)
                       gAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAata                                                                   <  2:2250933/93‑1 (MQ=255)
                       gAACGCAGCATTTCCTCAACATCGTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAata                                                                   <  2:2831782/93‑1 (MQ=255)
                         aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata                                                                 >  2:7052162/1‑93 (MQ=255)
                         aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata                                                                 >  1:3932059/1‑93 (MQ=255)
                         aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata                                                                 <  1:2726879/93‑1 (MQ=255)
                         aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata                                                                 <  2:7889782/93‑1 (MQ=255)
                          cGCATCATTTCCTCAACATCTTCACCAATGTTAAGTTTGCCCAGGTTCTGTAAGTTTGGAAGAACGTCCAGAAAAAGAATGCGCTCAATATaa                                                                >  2:464535/1‑93 (MQ=255)
                          cGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATaa                                                                <  2:7324194/93‑1 (MQ=255)
                          cGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATaa                                                                <  2:6171941/93‑1 (MQ=255)
                           gcagcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAc                                                               <  1:2628726/93‑1 (MQ=255)
                             agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa                                                             >  1:2875079/1‑93 (MQ=255)
                             agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa                                                             <  2:3026788/93‑1 (MQ=255)
                             agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa                                                             <  1:6886048/93‑1 (MQ=255)
                              gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTTGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt                                                            <  2:3217890/93‑1 (MQ=255)
                              gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt                                                            >  2:493401/1‑93 (MQ=255)
                              gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt                                                            >  2:5863384/1‑93 (MQ=255)
                               cagttCCCCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGGCCCTCCAGAAAAAGAATGCGCTCAATATAACGATc                                                           <  2:7419461/90‑1 (MQ=255)
                               caTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATc                                                           <  1:5194303/93‑1 (MQ=255)
                                aTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCg                                                          <  2:3605120/93‑1 (MQ=255)
                                aTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCg                                                          <  1:5805207/93‑1 (MQ=255)
                                aTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCg                                                          <  1:7242820/93‑1 (MQ=255)
                                 tttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCgg                                                         <  1:6148074/93‑1 (MQ=255)
                                      tCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtgt                                                    >  1:5707475/1‑93 (MQ=255)
                                       cAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGtt                                                   <  2:3106189/93‑1 (MQ=255)
                                       cAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGtt                                                   >  1:2236963/1‑93 (MQ=255)
                                        aaCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGttt                                                  <  1:4530975/93‑1 (MQ=255)
                                        aaCATCTTCACCAATGTTCAGTTTGCACAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGttt                                                  >  2:2596403/1‑93 (MQ=255)
                                          cATCTTCACCAATGTTCCGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                <  1:7832872/93‑1 (MQ=255)
                                          cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                >  2:138520/1‑93 (MQ=255)
                                          cATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtca                                                <  1:1330075/93‑1 (MQ=255)
                                           aTCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcat                                               <  2:6674755/93‑1 (MQ=255)
                                            tCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatc                                              >  2:1782091/1‑93 (MQ=255)
                                            tCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatc                                              >  1:6516130/1‑93 (MQ=255)
                                             cTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatct                                             >  2:5419267/1‑93 (MQ=255)
                                                cACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctcat                                          <  2:557474/93‑1 (MQ=255)
                                                 aCCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctcatc                                         >  1:3657/1‑93 (MQ=255)
                                                  ccAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCtcatca                                        >  1:5118702/1‑93 (MQ=255)
                                                   cAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCaa                                       >  2:5898382/1‑93 (MQ=255)
                                                   cAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCaa                                       <  2:3286051/93‑1 (MQ=255)
                                                     aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg                                     <  1:6582878/93‑1 (MQ=255)
                                                       gTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGa                                   >  2:7622689/1‑93 (MQ=255)
                                                        ttCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGAt                                  <  1:1972140/93‑1 (MQ=255)
                                                          cAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTc                                >  2:8151667/1‑93 (MQ=255)
                                                           aGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCa                               >  1:6775670/1‑93 (MQ=255)
                                                             tttGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATg                             <  2:6051588/93‑1 (MQ=255)
                                                             tttGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATg                             >  2:914584/1‑93 (MQ=255)
                                                               tGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAt                           <  1:5085392/93‑1 (MQ=255)
                                                               tGCCCAGGTCCTGCAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAt                           <  1:3743503/93‑1 (MQ=255)
                                                                gCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATa                          >  1:1562307/1‑93 (MQ=255)
                                                                  ccAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACt                        >  2:8731846/1‑93 (MQ=255)
                                                                   cAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTc                       >  2:3973370/1‑93 (MQ=255)
                                                                   cAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTc                       <  1:3062258/93‑1 (MQ=255)
                                                                     ggTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCca                     >  2:5046120/1‑93 (MQ=255)
                                                                      gTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcac                    >  1:1809165/1‑93 (MQ=255)
                                                                      gTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcac                    >  1:330113/1‑93 (MQ=255)
                                                                         cTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatc                 >  1:5270295/1‑93 (MQ=255)
                                                                          tGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatca                >  2:4362025/1‑93 (MQ=255)
                                                                          tGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatca                >  1:3445975/1‑93 (MQ=255)
                                                                           gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat               <  1:3129757/93‑1 (MQ=255)
                                                                              aGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTga            >  1:7955452/1‑93 (MQ=255)
                                                                              aGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTga            <  1:6075614/93‑1 (MQ=255)
                                                                               gTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgag           >  1:7376146/1‑93 (MQ=255)
                                                                               gTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgag           >  2:3699766/1‑93 (MQ=255)
                                                                               gTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgag           <  2:6793341/93‑1 (MQ=255)
                                                                                 ttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAc         <  1:8218503/93‑1 (MQ=255)
                                                                                 ttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAc         <  1:6946626/93‑1 (MQ=255)
                                                                                 ttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAc         <  1:7649494/93‑1 (MQ=255)
                                                                                   ggAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt       >  2:1980383/1‑93 (MQ=255)
                                                                                   ggAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt       >  2:2645763/1‑93 (MQ=255)
                                                                                    gAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGtt      <  2:1683773/93‑1 (MQ=255)
                                                                                     aaGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGttt     <  2:5939160/93‑1 (MQ=255)
                                                                                       gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga   >  1:6221781/1‑93 (MQ=255)
                                                                                       gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga   >  1:919680/1‑93 (MQ=255)
                                                                                       gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga   <  2:1173511/93‑1 (MQ=255)
                                                                                        aCCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTgag  <  2:8794366/93‑1 (MQ=255)
                                                                                           |                                                                                         
CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG  >  NC_000913/3464074‑3464254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  NC_000913/3464072‑3464258
                                                                                             |                                                                                             
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCC                                                                                               >  SRR4302541.1912515/1‑94 (MQ=60)
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCC                                                                                               >  SRR4302541.3917294/1‑94 (MQ=60)
  CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             >  SRR4302541.1948336/1‑94 (MQ=60)
  CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             >  SRR4302541.4512456/1‑94 (MQ=60)
  CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCATCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC                                                                                             >  SRR4302541.4976485/1‑94 (MQ=60)
  CATCCAGCTCAAGTACCAGATCAGAACGCAGCATTTACTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTC                                                                                             <  SRR4302541.4889117/94‑1 (MQ=60)
   ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTACGTTTGGAAGACCCTCC                                                                                            >  SRR4302541.2863013/1‑94 (MQ=60)
     CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302541.4874408/94‑1 (MQ=60)
     CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302541.2652911/94‑1 (MQ=60)
     CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302541.5799492/94‑1 (MQ=60)
     CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          <  SRR4302541.8575431/94‑1 (MQ=60)
     CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG                                                                                          >  SRR4302541.1151400/1‑94 (MQ=60)
      CAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGA                                                                                         <  SRR4302541.7156597/94‑1 (MQ=60)
      CAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGA                                                                                         >  SRR4302541.5242340/1‑94 (MQ=60)
       AGCTCAAGTGCCAGATCAGAACGCAGCCTTTCCTCAATATCTTCACCAATGTTCTGTTTGCCCATGTCCTGTATGTTTGGAATACCCTCCAGAA                                                                                        >  SRR4302541.6233952/1‑94 (MQ=60)
       AGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAA                                                                                        >  SRR4302541.2150754/1‑94 (MQ=60)
        GCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAA                                                                                       >  SRR4302541.2407778/1‑94 (MQ=60)
         CTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAA                                                                                      >  SRR4302541.1634049/1‑94 (MQ=60)
         CTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAA                                                                                      >  SRR4302541.5070106/1‑94 (MQ=60)
          TCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAA                                                                                     >  SRR4302541.5498926/1‑94 (MQ=60)
          TCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAA                                                                                     >  SRR4302541.3751590/1‑94 (MQ=60)
           CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG                                                                                    <  SRR4302541.6669407/94‑1 (MQ=60)
           CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG                                                                                    <  SRR4302541.6816454/94‑1 (MQ=60)
           CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG                                                                                    <  SRR4302541.8293738/94‑1 (MQ=60)
            AAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGA                                                                                   <  SRR4302541.8731307/94‑1 (MQ=60)
             AGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAA                                                                                  >  SRR4302541.7750094/1‑94 (MQ=60)
              GTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 >  SRR4302541.1055481/1‑94 (MQ=60)
              GTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 <  SRR4302541.505191/94‑1 (MQ=60)
              GTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAT                                                                                 <  SRR4302541.1311999/94‑1 (MQ=60)
               TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG                                                                                >  SRR4302541.582733/1‑94 (MQ=60)
               TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG                                                                                <  SRR4302541.6267867/94‑1 (MQ=60)
               TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG                                                                                <  SRR4302541.4786891/94‑1 (MQ=60)
               TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG                                                                                <  SRR4302541.4469900/94‑1 (MQ=60)
                GCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCGGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGC                                                                               <  SRR4302541.7692923/94‑1 (MQ=60)
                GCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGC                                                                               >  SRR4302541.5199379/1‑94 (MQ=60)
                GCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGC                                                                               >  SRR4302541.4664045/1‑94 (MQ=60)
                 CCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCG                                                                              <  SRR4302541.7959561/94‑1 (MQ=60)
                 CCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCG                                                                              <  SRR4302541.7993192/94‑1 (MQ=60)
                  CGGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCGAGGTCCTGTACGTTTGCAAGACCCTCCAGAAAACGAATGCGC                                                                             >  SRR4302541.2743703/1‑94 (MQ=60)
                  CAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGC                                                                             >  SRR4302541.2743702/1‑94 (MQ=60)
                   AGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCT                                                                            >  SRR4302541.567039/1‑94 (MQ=60)
                   AGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCT                                                                            >  SRR4302541.97077/1‑94 (MQ=60)
                    GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC                                                                           <  SRR4302541.413783/94‑1 (MQ=60)
                    GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC                                                                           >  SRR4302541.1069833/1‑94 (MQ=60)
                    GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC                                                                           <  SRR4302541.3470708/94‑1 (MQ=60)
                    GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC                                                                           <  SRR4302541.1298001/94‑1 (MQ=60)
                     ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA                                                                          <  SRR4302541.5154433/94‑1 (MQ=60)
                     ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA                                                                          >  SRR4302541.8773897/1‑94 (MQ=60)
                     ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA                                                                          >  SRR4302541.8773896/1‑94 (MQ=60)
                       CAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAT                                                                        >  SRR4302541.3816978/1‑94 (MQ=60)
                        AGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATA                                                                       <  SRR4302541.6224693/94‑1 (MQ=60)
                        AGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATA                                                                       <  SRR4302541.4374845/94‑1 (MQ=60)
                        AGAACGCAGCAATTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATA                                                                       >  SRR4302541.5286210/1‑94 (MQ=60)
                         GAACGCAGCATTTCCTCAACCTCTTCACCAATGTGCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGGCCCTCCAGAAAAAGAATGCGCTCAATAT                                                                      <  SRR4302541.4276033/94‑1 (MQ=60)
                         GAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATAT                                                                      <  SRR4302541.4276032/94‑1 (MQ=60)
                          AACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATA                                                                     >  SRR4302541.3971227/1‑94 (MQ=60)
                           ACGCAGCATTTCCTCACCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGCCCCTCCAGAAAAAGAATGCGCTCAATATAA                                                                    <  SRR4302541.8718768/94‑1 (MQ=60)
                           ACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAA                                                                    <  SRR4302541.8718769/94‑1 (MQ=60)
                           ACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAA                                                                    <  SRR4302541.2754138/94‑1 (MQ=60)
                            CGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAC                                                                   >  SRR4302541.4287553/1‑94 (MQ=60)
                            CGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAC                                                                   >  SRR4302541.4287301/1‑94 (MQ=60)
                            CGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAC                                                                   <  SRR4302541.7320601/94‑1 (MQ=60)
                             GCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACG                                                                  <  SRR4302541.2160041/94‑1 (MQ=60)
                             GCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACG                                                                  >  SRR4302541.1627695/1‑94 (MQ=60)
                             GCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACG                                                                  <  SRR4302541.2654955/94‑1 (MQ=60)
                              CAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGA                                                                 >  SRR4302541.2903931/1‑94 (MQ=60)
                              CAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGA                                                                 <  SRR4302541.8876078/94‑1 (MQ=60)
                               AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                <  SRR4302541.6959548/94‑1 (MQ=60)
                               AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                <  SRR4302541.8214205/94‑1 (MQ=60)
                               AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                >  SRR4302541.2296750/1‑94 (MQ=60)
                               AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT                                                                <  SRR4302541.8813335/94‑1 (MQ=60)
                                GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC                                                               <  SRR4302541.2910446/94‑1 (MQ=60)
                                GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC                                                               <  SRR4302541.6969722/94‑1 (MQ=60)
                                GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC                                                               <  SRR4302541.5739438/94‑1 (MQ=60)
                                GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC                                                               >  SRR4302541.8202541/1‑94 (MQ=60)
                                GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC                                                               <  SRR4302541.2834729/94‑1 (MQ=60)
                                 CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG                                                              >  SRR4302541.2400159/1‑94 (MQ=60)
                                 CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG                                                              <  SRR4302541.5247757/94‑1 (MQ=60)
                                 CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG                                                              >  SRR4302541.4418106/1‑94 (MQ=60)
                                  ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302541.6197094/1‑94 (MQ=60)
                                  ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             <  SRR4302541.5864184/94‑1 (MQ=60)
                                  ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             <  SRR4302541.7320067/94‑1 (MQ=60)
                                  ATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGG                                                             >  SRR4302541.6858949/1‑94 (MQ=60)
                                   TTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGC                                                            <  SRR4302541.6210890/94‑1 (MQ=60)
                                   TTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGC                                                            <  SRR4302541.3268493/94‑1 (MQ=60)
                                   TTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGC                                                            <  SRR4302541.6334917/94‑1 (MQ=60)
                                    TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG                                                           >  SRR4302541.4470456/1‑94 (MQ=60)
                                    TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG                                                           >  SRR4302541.7017646/1‑94 (MQ=60)
                                    TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG                                                           >  SRR4302541.529049/1‑94 (MQ=60)
                                      CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         >  SRR4302541.1647030/1‑94 (MQ=60)
                                      CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG                                                         <  SRR4302541.7523754/94‑1 (MQ=60)
                                      CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATAGGCGTG                                                         >  SRR4302541.4571761/1‑94 (MQ=60)
                                       CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGT                                                        >  SRR4302541.5765660/1‑94 (MQ=60)
                                       CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGT                                                        >  SRR4302541.3724525/1‑94 (MQ=60)
                                        TCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTT                                                       <  SRR4302541.7453294/94‑1 (MQ=60)
                                        TCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTT                                                       >  SRR4302541.2258629/1‑94 (MQ=60)
                                        TCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTT                                                       <  SRR4302541.3509068/94‑1 (MQ=60)
                                         CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT                                                      >  SRR4302541.6819310/1‑94 (MQ=60)
                                          AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     <  SRR4302541.4576727/94‑1 (MQ=60)
                                          AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC                                                     <  SRR4302541.418529/94‑1 (MQ=60)
                                           CCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCA                                                    >  SRR4302541.6489561/1‑94 (MQ=60)
                                            CATCTTCACCAATGTTCCGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT                                                   <  SRR4302541.7918186/94‑1 (MQ=60)
                                            CATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT                                                   <  SRR4302541.391323/94‑1 (MQ=60)
                                            CATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT                                                   <  SRR4302541.1343143/94‑1 (MQ=60)
                                             ATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC                                                  >  SRR4302541.3464862/1‑94 (MQ=60)
                                             ATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC                                                  >  SRR4302541.6582624/1‑94 (MQ=60)
                                              TCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 <  SRR4302541.2092084/94‑1 (MQ=60)
                                              TCTTCACCAATGTTCAGTTAGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 <  SRR4302541.5149535/94‑1 (MQ=60)
                                              TCTTCACCAATGTGCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 <  SRR4302541.1493058/94‑1 (MQ=60)
                                              ACTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCT                                                 <  SRR4302541.3088309/94‑1 (MQ=60)
                                               CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                >  SRR4302541.1901323/1‑94 (MQ=60)
                                               CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC                                                >  SRR4302541.5165670/1‑94 (MQ=60)
                                                TTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCA                                               >  SRR4302541.497186/1‑94 (MQ=60)
                                                 TCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCATAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCAT                                              >  SRR4302541.3231413/1‑94 (MQ=60)
                                                 TCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCAT                                              <  SRR4302541.6630845/94‑1 (MQ=60)
                                                  CACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATC                                             >  SRR4302541.7851216/1‑94 (MQ=60)
                                                  CACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATC                                             >  SRR4302541.3690/1‑94 (MQ=60)
                                                  CACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATC                                             >  SRR4302541.7124712/1‑94 (MQ=60)
                                                  CACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATC                                             <  SRR4302541.6887895/94‑1 (MQ=60)
                                                   ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA                                            <  SRR4302541.6622955/94‑1 (MQ=60)
                                                   ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA                                            >  SRR4302541.5171279/1‑94 (MQ=60)
                                                   ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGGGTTTCATCTCATCA                                            >  SRR4302541.3115935/1‑94 (MQ=60)
                                                    CCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAA                                           >  SRR4302541.6151611/1‑94 (MQ=60)
                                                     CAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAT                                          >  SRR4302541.1487209/1‑94 (MQ=60)
                                                       ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG                                        <  SRR4302541.6650254/94‑1 (MQ=60)
                                                        TGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGA                                       <  SRR4302541.2642012/94‑1 (MQ=60)
                                                          TTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATT                                     <  SRR4302541.1991169/94‑1 (MQ=60)
                                                            CAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCA                                   >  SRR4302541.6848138/1‑94 (MQ=60)
                                                            CAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCA                                   >  SRR4302541.6848137/1‑94 (MQ=60)
                                                            CAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCA                                   >  SRR4302541.5310950/1‑94 (MQ=60)
                                                             AGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAT                                  <  SRR4302541.7148648/94‑1 (MQ=60)
                                                             AGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAT                                  >  SRR4302541.7538668/1‑94 (MQ=60)
                                                              GTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATG                                 >  SRR4302541.8476075/1‑94 (MQ=60)
                                                               TTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCTTGA                                >  SRR4302541.2537277/1‑94 (MQ=60)
                                                                 TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA                              <  SRR4302541.5137637/94‑1 (MQ=60)
                                                                 TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA                              >  SRR4302541.8693695/1‑94 (MQ=60)
                                                                 TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA                              >  SRR4302541.1577956/1‑94 (MQ=60)
                                                                 TGCCCAGGTCCTGCAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA                              <  SRR4302541.3781181/94‑1 (MQ=60)
                                                                   CCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACT                            >  SRR4302541.3151933/1‑94 (MQ=60)
                                                                    CCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTC                           >  SRR4302541.1325049/1‑94 (MQ=60)
                                                                     CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC                          <  SRR4302541.6913906/94‑1 (MQ=60)
                                                                     CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC                          <  SRR4302541.3093292/94‑1 (MQ=60)
                                                                      AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA                         >  SRR4302541.5917021/1‑94 (MQ=60)
                                                                      AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA                         >  SRR4302541.5084856/1‑94 (MQ=60)
                                                                       GGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAC                        >  SRR4302541.333073/1‑94 (MQ=60)
                                                                       GGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAC                        >  SRR4302541.1826745/1‑94 (MQ=60)
                                                                        GTCCTGTAAGTTTGGAAGACCCTCCATAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACA                       >  SRR4302541.894749/1‑94 (MQ=60)
                                                                         TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      <  SRR4302541.6721465/94‑1 (MQ=60)
                                                                         TCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACAT                      >  SRR4302541.4546259/1‑94 (MQ=60)
                                                                          CCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATC                     >  SRR4302541.5324591/1‑94 (MQ=60)
                                                                           CTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCA                    >  SRR4302541.3480402/1‑94 (MQ=60)
                                                                           CTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCA                    >  SRR4302541.8741574/1‑94 (MQ=60)
                                                                           CTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCA                    <  SRR4302541.5684504/94‑1 (MQ=60)
                                                                            TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT                   <  SRR4302541.6789647/94‑1 (MQ=60)
                                                                             GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT                  <  SRR4302541.3161392/94‑1 (MQ=60)
                                                                             GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT                  <  SRR4302541.5961625/94‑1 (MQ=60)
                                                                             GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT                  <  SRR4302541.5695134/94‑1 (MQ=60)
                                                                               AAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGA                >  SRR4302541.8043118/1‑94 (MQ=60)
                                                                               AAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGA                <  SRR4302541.3072374/94‑1 (MQ=60)
                                                                                AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG               <  SRR4302541.3560021/94‑1 (MQ=60)
                                                                                AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG               <  SRR4302541.6137634/94‑1 (MQ=60)
                                                                                AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG               >  SRR4302541.7454990/1‑94 (MQ=60)
                                                                                   TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302541.8308149/94‑1 (MQ=60)
                                                                                   TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302541.5887582/94‑1 (MQ=60)
                                                                                   TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302541.3662679/94‑1 (MQ=60)
                                                                                   TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302541.7020719/94‑1 (MQ=60)
                                                                                   TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG            <  SRR4302541.7731000/94‑1 (MQ=60)
                                                                                      GAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTT         <  SRR4302541.5367666/94‑1 (MQ=60)
                                                                                      GAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTT         <  SRR4302541.6297321/94‑1 (MQ=60)
                                                                                       AAGACCCTCCAGAAAAAGAATTCGCTCAATATAGCGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302541.7806404/94‑1 (MQ=60)
                                                                                       AAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302541.3834563/94‑1 (MQ=60)
                                                                                       AAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302541.3187177/94‑1 (MQ=60)
                                                                                       AAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTG        <  SRR4302541.4976094/94‑1 (MQ=60)
                                                                                        AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       >  SRR4302541.6285355/1‑94 (MQ=60)
                                                                                        AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA       >  SRR4302541.928288/1‑94 (MQ=60)
                                                                                         GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      <  SRR4302541.8437321/94‑1 (MQ=60)
                                                                                         GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      <  SRR4302541.2665203/94‑1 (MQ=60)
                                                                                         GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG      >  SRR4302541.1124514/1‑94 (MQ=60)
                                                                                          ACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA     >  SRR4302541.243916/1‑94 (MQ=60)
                                                                                          ACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGA     >  SRR4302541.3575314/1‑94 (MQ=60)
                                                                                           CCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC    >  SRR4302541.1291818/1‑94 (MQ=60)
                                                                                           CCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC    >  SRR4302541.2889485/1‑94 (MQ=60)
                                                                                            CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC   >  SRR4302541.1260449/1‑94 (MQ=60)
                                                                                            CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC   >  SRR4302541.8671295/1‑94 (MQ=60)
                                                                                            CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC   >  SRR4302541.8577168/1‑94 (MQ=60)
                                                                                            CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC   <  SRR4302541.7752828/94‑1 (MQ=60)
                                                                                             CTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  <  SRR4302541.8357982/94‑1 (MQ=60)
                                                                                             CTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  SRR4302541.3047995/1‑94 (MQ=60)
                                                                                             CTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  SRR4302541.4735430/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACCC  >  NC_000913/3464072‑3464258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑