Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,464,165 |
T→C |
E66E (GAA→GAG) |
bfr ← |
bacterioferrin |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,464,165 | 0 | T | C | 100.0%
| 778.0
/ NA
| 220 | E66E (GAA→GAG) | bfr | bacterioferrin |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/113); total (107/113) |
Only 100 of 224 total aligned reads displayed.
ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG > NC_000913/3464075‑3464254
|
aTCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTc > 2:5501488/1‑93 (MQ=255)
aTCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTc > 2:6077758/1‑93 (MQ=255)
tCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTcc < 2:5192367/93‑1 (MQ=255)
tCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTcc > 1:1856449/1‑93 (MQ=255)
tCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTcc < 1:5021954/93‑1 (MQ=255)
ccAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCa < 2:5223720/93‑1 (MQ=255)
cAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAg > 2:4770649/1‑93 (MQ=255)
cAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAg < 1:376811/93‑1 (MQ=255)
tCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaa > 1:159136/1‑93 (MQ=255)
cAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaaa > 2:2691663/1‑93 (MQ=255)
cAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaaa > 1:3207428/1‑93 (MQ=255)
cAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGaaaaa < 2:1181213/93‑1 (MQ=255)
aaGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAg > 2:4926839/1‑93 (MQ=255)
aaGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAg > 1:1036521/1‑93 (MQ=255)
aGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGa < 2:4455309/93‑1 (MQ=255)
aGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGa > 1:4129613/1‑93 (MQ=255)
gTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGaa < 2:6207272/93‑1 (MQ=255)
gTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGaa < 2:5622361/93‑1 (MQ=255)
tGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAAt < 1:2152082/93‑1 (MQ=255)
gATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCt < 1:847396/93‑1 (MQ=255)
aTCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTc > 2:4213212/1‑93 (MQ=255)
tCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCa > 2:75649/1‑93 (MQ=255)
cAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCaa > 1:1311778/1‑93 (MQ=255)
cAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCaa < 2:5136752/93‑1 (MQ=255)
cAGAACGCAGCATTCCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGACCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCaa < 2:2864173/93‑1 (MQ=255)
aGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAat < 1:3735347/93‑1 (MQ=255)
aGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAat > 2:4547017/1‑93 (MQ=255)
aaCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAatat < 2:5287821/93‑1 (MQ=255)
aaCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAatat < 1:5375072/93‑1 (MQ=255)
aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata > 2:5843911/1‑93 (MQ=255)
aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata > 1:2666411/1‑93 (MQ=255)
aCGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAtata > 2:718307/1‑93 (MQ=255)
cGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATACGCTCAATATaa < 2:3466439/93‑1 (MQ=255)
gcagcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAc > 2:1972392/1‑93 (MQ=255)
agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa < 2:5953455/93‑1 (MQ=255)
agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa < 2:5123684/93‑1 (MQ=255)
agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa > 1:4834834/1‑93 (MQ=255)
agcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGa > 2:5421069/1‑93 (MQ=255)
gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt > 2:3848159/1‑93 (MQ=255)
gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt < 1:4382563/93‑1 (MQ=255)
gcaTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAt < 2:216202/93‑1 (MQ=255)
caTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATc < 2:3629011/93‑1 (MQ=255)
aTTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCg > 1:4667505/1‑93 (MQ=255)
tttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCgg < 2:817782/93‑1 (MQ=255)
ttCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGc < 2:4271470/93‑1 (MQ=255)
tcatCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCg < 2:6344819/90‑1 (MQ=255)
tCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCg > 1:5174166/1‑93 (MQ=255)
ccTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgt > 1:5391771/1‑93 (MQ=255)
ccTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgt < 1:2114177/93‑1 (MQ=255)
cTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtg < 2:4352465/93‑1 (MQ=255)
cTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtg > 1:5578647/1‑93 (MQ=255)
cTCAACATCTTCACCAATGTTCAGTTTGCCCAGGGTCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAAGATCGGCgtg > 1:4367341/1‑93 (MQ=255)
tCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCATAAAAAGAATGCGCTCAATATAACGATCGGCgtgt > 1:2214305/1‑93 (MQ=255)
tCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCgtgt > 2:3805394/1‑93 (MQ=255)
cAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGtt < 2:6168618/93‑1 (MQ=255)
aaCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGttt > 1:303120/1‑93 (MQ=255)
aCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtc < 2:4970073/93‑1 (MQ=255)
aCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtc > 2:1648445/1‑93 (MQ=255)
aCATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtc > 1:5825451/1‑93 (MQ=255)
aTCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcat > 2:644896/1‑93 (MQ=255)
cTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCTCTCAATATAACGATCGGCGTGTTtcatct < 1:6239189/93‑1 (MQ=255)
taaCCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctca < 2:5062597/91‑1 (MQ=255)
aCCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTtcatctcatc < 2:4052962/93‑1 (MQ=255)
ccAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCtcatca > 2:1066152/1‑93 (MQ=255)
ccAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCtcatca > 2:1852667/1‑93 (MQ=255)
ctaTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCaa > 1:4053304/3‑93 (MQ=255)
cgtGTTCAGTTTGCCCAGGGCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAt < 2:1416591/91‑1 (MQ=255)
aaTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAAt > 2:3734473/1‑93 (MQ=255)
aTGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATg < 1:2408043/93‑1 (MQ=255)
tGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATgg < 1:5484693/93‑1 (MQ=255)
tGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATgg < 1:6270537/93‑1 (MQ=255)
gTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGa < 2:1616113/93‑1 (MQ=255)
ttCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGAt > 1:1709286/1‑93 (MQ=255)
gTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAt > 1:6210947/1‑93 (MQ=255)
gTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAt > 1:5894514/1‑93 (MQ=255)
ttGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGa < 2:4561724/93‑1 (MQ=255)
tGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAt < 2:2414083/93‑1 (MQ=255)
tGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGAt < 2:3552007/93‑1 (MQ=255)
ccAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACt > 1:6417009/1‑93 (MQ=255)
ccAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACt > 1:2011873/1‑93 (MQ=255)
cAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTc > 2:1599155/1‑93 (MQ=255)
aGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTcc > 1:5736898/1‑93 (MQ=255)
ggcccTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCca > 2:3272872/4‑93 (MQ=255)
tCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCcaca > 2:425297/1‑93 (MQ=255)
cTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatc > 1:3606279/1‑93 (MQ=255)
cTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatc > 2:308784/1‑93 (MQ=255)
cTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatc < 1:2437046/93‑1 (MQ=255)
gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat < 1:4792422/93‑1 (MQ=255)
gTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCAcatcat > 1:4896515/1‑93 (MQ=255)
aaGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTg > 1:1485432/1‑93 (MQ=255)
tttGGAATGCCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgaga < 2:1870849/93‑1 (MQ=255)
tttGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTgaga < 2:3931998/93‑1 (MQ=255)
tGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACg > 1:2772642/1‑93 (MQ=255)
ggAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt < 2:4899235/93‑1 (MQ=255)
ggAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGt < 1:829121/93‑1 (MQ=255)
gAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGtt > 2:5654150/1‑93 (MQ=255)
gAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGtt < 2:1481073/93‑1 (MQ=255)
aGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTg > 2:59698/1‑93 (MQ=255)
gACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTga < 1:5669524/93‑1 (MQ=255)
aCCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTgag > 1:2879725/1‑93 (MQ=255)
|
ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG > NC_000913/3464075‑3464254
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC > NC_000913/3464072‑3464257
|
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCC < SRR4302534.2973613/94‑1 (MQ=60)
GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCC > SRR4302534.4297556/1‑94 (MQ=60)
CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT > SRR4302534.49500/1‑94 (MQ=60)
CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT < SRR4302534.5569815/94‑1 (MQ=60)
CCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCT > SRR4302534.514127/1‑94 (MQ=60)
CATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTC < SRR4302534.4832464/94‑1 (MQ=60)
ATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCC > SRR4302534.1904763/1‑94 (MQ=60)
TCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCA < SRR4302534.5157622/94‑1 (MQ=60)
CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG > SRR4302534.4806835/1‑94 (MQ=60)
CCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAG < SRR4302534.5116662/94‑1 (MQ=60)
CAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGA < SRR4302534.386441/94‑1 (MQ=60)
AGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAA > SRR4302534.2478800/1‑94 (MQ=60)
CTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAA > SRR4302534.163299/1‑94 (MQ=60)
TCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAA > SRR4302534.3292484/1‑94 (MQ=60)
CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG < SRR4302534.486978/94‑1 (MQ=60)
CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG > SRR4302534.1063269/1‑94 (MQ=60)
CAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAG < SRR4302534.3961002/94‑1 (MQ=60)
AAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGA > SRR4302534.1925321/1‑94 (MQ=60)
AAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGA > SRR4302534.4240877/1‑94 (MQ=60)
TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG < SRR4302534.1565981/94‑1 (MQ=60)
TGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATG < SRR4302534.2208890/94‑1 (MQ=60)
CAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGC < SRR4302534.2831787/94‑1 (MQ=60)
AGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCT > SRR4302534.2165187/1‑94 (MQ=60)
GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC < SRR4302534.868754/94‑1 (MQ=60)
GATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTC < SRR4302534.1865298/94‑1 (MQ=60)
ATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCA > SRR4302534.6605706/1‑94 (MQ=60)
TCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAA > SRR4302534.1346372/1‑94 (MQ=60)
CAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAAT < SRR4302534.2251982/94‑1 (MQ=60)
AGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATA < SRR4302534.3835693/94‑1 (MQ=60)
AACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATA > SRR4302534.2736892/1‑94 (MQ=60)
AACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATA < SRR4302534.5519911/94‑1 (MQ=60)
CAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGA > SRR4302534.4966009/1‑94 (MQ=60)
AGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGAT < SRR4302534.5934217/94‑1 (MQ=60)
GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC < SRR4302534.4500709/94‑1 (MQ=60)
GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC < SRR4302534.2945240/94‑1 (MQ=60)
GCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATC > SRR4302534.5798608/1‑94 (MQ=60)
CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG > SRR4302534.625599/1‑94 (MQ=60)
CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG > SRR4302534.4794222/1‑94 (MQ=60)
CATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCG > SRR4302534.2254965/1‑94 (MQ=60)
TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG < SRR4302534.5456929/94‑1 (MQ=60)
TTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCG > SRR4302534.5313608/1‑94 (MQ=60)
TCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGT > SRR4302534.5536963/1‑94 (MQ=60)
TCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGT < SRR4302534.5733680/94‑1 (MQ=60)
CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG > SRR4302534.1358275/1‑94 (MQ=60)
CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG > SRR4302534.5729351/1‑94 (MQ=60)
CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTG < SRR4302534.2169790/94‑1 (MQ=60)
CCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGGTCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAAAGATCGGCGTG > SRR4302534.4485053/1‑94 (MQ=60)
CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCATAAAAAGAATGCGCTCAATATAACGATCGGCGTGT > SRR4302534.2272955/1‑94 (MQ=60)
CTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGT > SRR4302534.4973949/1‑94 (MQ=60)
CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT > SRR4302534.310932/1‑94 (MQ=60)
CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT < SRR4302534.6422609/94‑1 (MQ=60)
CAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTT < SRR4302534.4526353/94‑1 (MQ=60)
CAACATCTTCACCAATGCTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACACTCCAGAAAACGAATGCGCTCAATATAACGATCGGCGTGTTT > SRR4302534.598932/1‑94 (MQ=60)
AACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTC > SRR4302534.5983575/1‑94 (MQ=60)
CATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCAT < SRR4302534.5823824/94‑1 (MQ=60)
TTCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC > SRR4302534.1723773/1‑94 (MQ=60)
ATCTTCACCGATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC > SRR4302534.6534579/1‑94 (MQ=60)
ATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATC < SRR4302534.3375099/94‑1 (MQ=60)
CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCTCTCAATATAACGATCGGCGTGTTTCATCTC < SRR4302534.6408497/94‑1 (MQ=60)
CTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTC > SRR4302534.2967103/1‑94 (MQ=60)
TTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCA > SRR4302534.1893751/1‑94 (MQ=60)
ACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCA < SRR4302534.2180029/94‑1 (MQ=60)
CCTATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAA > SRR4302534.4162021/1‑94 (MQ=60)
ATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGG < SRR4302534.2472049/94‑1 (MQ=60)
TGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGA < SRR4302534.6440314/94‑1 (MQ=60)
TGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGA > SRR4302534.2785408/1‑94 (MQ=60)
TGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGA < SRR4302534.5632617/94‑1 (MQ=60)
GTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGAT > SRR4302534.1753702/1‑94 (MQ=60)
AGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAT > SRR4302534.6379749/1‑94 (MQ=60)
AGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCAT > SRR4302534.6054555/1‑94 (MQ=60)
GTTTTCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATG < SRR4302534.3429839/94‑1 (MQ=60)
TTTGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGA < SRR4302534.4960618/94‑1 (MQ=60)
TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA < SRR4302534.3704796/94‑1 (MQ=60)
TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA > SRR4302534.5625103/1‑94 (MQ=60)
TGCCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATA < SRR4302534.5527439/94‑1 (MQ=60)
CCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACT > SRR4302534.6590118/1‑94 (MQ=60)
CCCAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACT > SRR4302534.2064509/1‑94 (MQ=60)
CAGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCC > SRR4302534.5892370/1‑94 (MQ=60)
AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA > SRR4302534.536160/1‑94 (MQ=60)
AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA > SRR4302534.6400355/1‑94 (MQ=60)
AGGTCCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCA > SRR4302534.4280805/1‑94 (MQ=60)
CCTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATC > SRR4302534.3703252/1‑94 (MQ=60)
CTGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCA < SRR4302534.2501814/94‑1 (MQ=60)
TGTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCAT > SRR4302534.5029270/1‑94 (MQ=60)
GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT > SRR4302534.1074749/1‑94 (MQ=60)
GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT < SRR4302534.4922547/94‑1 (MQ=60)
GTAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATT < SRR4302534.4166881/94‑1 (MQ=60)
TAAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTG > SRR4302534.1524514/1‑94 (MQ=60)
AAGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGA > SRR4302534.6138084/1‑94 (MQ=60)
AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG < SRR4302534.2529325/94‑1 (MQ=60)
AGTTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAG < SRR4302534.3860155/94‑1 (MQ=60)
TTTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGAC < SRR4302534.863816/94‑1 (MQ=60)
TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG < SRR4302534.5669729/94‑1 (MQ=60)
TTGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACG > SRR4302534.2845597/1‑94 (MQ=60)
TGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGT < SRR4302534.961163/94‑1 (MQ=60)
TGGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGT < SRR4302534.4180348/94‑1 (MQ=60)
GGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTT < SRR4302534.671496/94‑1 (MQ=60)
GGAAGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTT < SRR4302534.849984/94‑1 (MQ=60)
AGACCCTCCAGAGAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA < SRR4302534.3281209/94‑1 (MQ=60)
AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA < SRR4302534.528992/94‑1 (MQ=60)
AGACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGA > SRR4302534.449353/1‑94 (MQ=60)
GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG < SRR4302534.5823024/94‑1 (MQ=60)
GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG > SRR4302534.2955304/1‑94 (MQ=60)
GACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAG < SRR4302534.2461516/94‑1 (MQ=60)
ACCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCcccccatccaccgactcctgataatccaaatcattgagacgttcgaga > SRR4302534.3724418/1‑46 (MQ=60)
CCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC > SRR4302534.5099905/1‑94 (MQ=60)
CCCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGAC < SRR4302534.678085/94‑1 (MQ=60)
CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC > SRR4302534.4887521/1‑94 (MQ=60)
CCTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC > SRR4302534.1385688/1‑94 (MQ=60)
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GCCATCCAGCTCAAGTGCCAGATCAGAACGCAGCATTTCCTCAACATCTTCACCAATGTTCAGTTTGCCCAGGTCCTGTAAGTTTGGAAGACCTTCCAGAAAAAGAATGCGCTCAATATAACGATCGGCGTGTTTCATCTCATCAATGGATTCATGATACTCCACATCATTGAGACGTTTGAGACC > NC_000913/3464072‑3464257
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
