Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,510,121 |
+G |
intergenic (‑358/+151) |
yhfZ ← / ← trpS |
hypothetical protein/tryptophan tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,510,120 | 1 | . | G | 97.0%
| 683.7
/ 11.5
| 201 | intergenic (‑357/+152) | yhfZ/trpS | hypothetical protein/tryptophan tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base G (124/71); total (127/74) |
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 231 total aligned reads displayed.
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG > NC_000913/3510028‑3510209
|
aaGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTcccc > 2:2156708/1‑93 (MQ=255)
aGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑g > 1:5463996/1‑93 (MQ=255)
aGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑g > 1:3115684/1‑93 (MQ=255)
gATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑gg > 2:846141/1‑92 (MQ=255)
aTAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑ggt < 2:4896993/93‑3 (MQ=255)
aaGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑gttt > 2:2671640/1‑92 (MQ=255)
aaGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCC‑G‑gttt > 1:4104700/1‑92 (MQ=255)
aGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑gtttc > 1:5783804/1‑91 (MQ=255)
ggCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCa > 1:5724503/1‑93 (MQ=255)
cAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGt < 1:4305807/93‑1 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtg > 1:762403/1‑93 (MQ=255)
aaCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtg > 1:4917980/1‑93 (MQ=255)
aCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtga > 1:1057192/1‑93 (MQ=255)
aCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtga > 1:1997885/1‑93 (MQ=255)
aCAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtga > 1:1038669/1‑93 (MQ=255)
aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtgatg > 1:5892521/1‑93 (MQ=255)
aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtgatg > 2:4094838/1‑93 (MQ=255)
aGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtgatg > 1:3739616/1‑93 (MQ=255)
gCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtgatga > 2:2789709/1‑93 (MQ=255)
gCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGtgatga > 1:2328496/1‑93 (MQ=255)
ggagaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTgatgat < 2:1324204/92‑1 (MQ=255)
cGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTgatgat > 2:6058084/1‑93 (MQ=255)
gagaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATa > 2:5296112/1‑93 (MQ=255)
gaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATaaa > 2:3882878/1‑93 (MQ=255)
gaTGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATaaa > 1:3340048/1‑93 (MQ=255)
ggAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCCGG‑TTTCAGAGTGATGATAAAAGCaa > 1:88073/1‑93 (MQ=255)
aaaCGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCaaaa < 2:6310640/93‑1 (MQ=255)
cGGCGAGGCACTTCGCATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTCCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTg < 2:1006418/93‑1 (MQ=255)
ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGc > 2:3929639/1‑93 (MQ=255)
ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGc < 1:4011947/93‑1 (MQ=255)
ggCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGc < 2:1763351/93‑1 (MQ=255)
gCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGcc < 1:2209271/93‑1 (MQ=255)
gAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTg > 1:5960794/1‑93 (MQ=255)
gAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTg < 1:1804856/93‑1 (MQ=255)
aGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGa < 1:3647109/93‑1 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCGAAAATACCTGAt > 2:622963/1‑93 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt > 2:1131805/1‑93 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt > 2:754266/1‑93 (MQ=255)
ggCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAt > 2:6011992/1‑93 (MQ=255)
gCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATg < 2:3287258/93‑1 (MQ=255)
aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg > 1:6040615/1‑93 (MQ=255)
aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg > 1:6164092/1‑93 (MQ=255)
aCTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcg > 2:3468946/1‑93 (MQ=255)
cTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcgc > 2:2972220/1‑93 (MQ=255)
cTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATgcgc < 1:4696595/93‑1 (MQ=255)
ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt < 1:5445298/93‑1 (MQ=255)
ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt > 2:4365307/1‑93 (MQ=255)
ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt > 1:3910527/1‑93 (MQ=255)
ttCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCt < 1:3711201/93‑1 (MQ=255)
cacaTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAc > 1:305583/1‑93 (MQ=255)
caTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGc < 2:3822194/93‑1 (MQ=255)
aTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCt < 2:5738451/93‑1 (MQ=255)
aTTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCt < 2:2124828/93‑1 (MQ=255)
tttttCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTa < 2:717605/93‑1 (MQ=255)
tCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAg > 1:1900540/1‑93 (MQ=255)
ggATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGc > 1:4620346/1‑93 (MQ=255)
ggATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGc > 2:3478564/1‑93 (MQ=255)
gATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGcc < 2:514417/93‑1 (MQ=255)
attattGCAAATGAGTATAAAAAAACCGGGTTTCCCC‑GTTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCt < 1:3546817/93‑1 (MQ=255)
attattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCt > 2:6166890/1‑93 (MQ=255)
tattGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTAc < 2:4224120/93‑1 (MQ=255)
attGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa < 1:2622363/93‑1 (MQ=255)
ttGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAt < 2:927034/93‑1 (MQ=255)
tGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAtt < 1:2176743/93‑1 (MQ=255)
cAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTc < 2:2425343/93‑1 (MQ=255)
aaaTGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTcc > 1:4938585/1‑93 (MQ=255)
aaTGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCt < 1:4071289/93‑1 (MQ=255)
aaTGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCt < 2:5044850/93‑1 (MQ=255)
aaTGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCt > 1:6407337/1‑93 (MQ=255)
aTGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt > 1:540022/1‑93 (MQ=255)
tGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTg > 1:3502925/1‑93 (MQ=255)
tGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTg > 2:4578916/1‑93 (MQ=255)
gAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGc > 1:4542329/1‑93 (MQ=255)
aGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCa > 2:428748/1‑93 (MQ=255)
gATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAat > 1:1161500/1‑93 (MQ=255)
aTAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAata < 2:2805173/93‑1 (MQ=255)
tAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAatat > 2:1568064/1‑93 (MQ=255)
tAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAatat > 1:2773438/1‑93 (MQ=255)
aaaaaaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgt > 2:3775796/1‑93 (MQ=255)
aaaaaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgtg > 2:2818558/1‑93 (MQ=255)
aaaaaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtgtg > 2:653137/1‑93 (MQ=255)
agaaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCATGCCTACATTTCCTTGCAATATGTGc > 2:6242429/3‑93 (MQ=37)
aaaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa > 1:5094556/1‑93 (MQ=255)
aaCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt > 2:831038/1‑93 (MQ=255)
aCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtt < 2:3039101/93‑1 (MQ=255)
aCCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtt < 2:3872002/93‑1 (MQ=255)
cGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAc > 2:5846426/1‑93 (MQ=255)
cGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAc > 1:1476371/1‑93 (MQ=255)
gggTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACt < 1:2883742/93‑1 (MQ=255)
gggTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACt > 2:1212606/1‑93 (MQ=255)
ggTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt < 1:3093605/93‑1 (MQ=255)
gTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACttt > 2:1456805/1‑93 (MQ=255)
tttCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTg > 2:3961412/1‑93 (MQ=255)
tccccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTa < 2:3804049/91‑1 (MQ=255)
ccccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg > 2:4138011/2‑93 (MQ=255)
cccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTacg > 2:1539315/1‑91 (MQ=255)
cccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg > 2:2481087/1‑93 (MQ=255)
cccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg > 2:3419263/1‑93 (MQ=255)
cccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg > 2:5632445/1‑93 (MQ=255)
cccg‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAgg < 2:2219754/93‑1 (MQ=255)
|
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG > NC_000913/3510028‑3510209
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA > NC_000913/3510028‑3510214
|
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G > SRR4302534.3197610/1‑94 (MQ=60)
AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G > SRR4302534.5611271/1‑94 (MQ=60)
AGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑G > SRR4302534.5927540/1‑94 (MQ=60)
AGATAAGGCGCAACAGAGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑G < SRR4302534.1181741/94‑1 (MQ=60)
ATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCC‑G‑GTT > SRR4302534.6349265/1‑94 (MQ=60)
TAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCCGG‑TTT > SRR4302534.4215089/1‑94 (MQ=60)
AAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTC > SRR4302534.5940692/1‑94 (MQ=60)
AGGCGCAACAGCGAGATGTGGACACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCA < SRR4302534.2172724/94‑1 (MQ=60)
AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCA < SRR4302534.2234648/94‑1 (MQ=60)
AGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCA > SRR4302534.5879578/1‑94 (MQ=60)
GCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGA > SRR4302534.2130720/1‑94 (MQ=60)
CAACAGCGGGATGTGGAAACGGCGAGGCACTTCTCATTTTTTCGGATTATTGCAAATGCAGATAAAAAAAACGGGTCTCCCC‑Ggtttctggatt > SRR4302534.5091407/1‑83 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG > SRR4302534.781329/1‑94 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG > SRR4302534.290232/1‑94 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG < SRR4302534.4422523/94‑1 (MQ=60)
CAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTG > SRR4302534.5051269/1‑94 (MQ=60)
AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA > SRR4302534.1065475/1‑94 (MQ=60)
AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA > SRR4302534.1084570/1‑94 (MQ=60)
AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA > SRR4302534.4310891/1‑94 (MQ=60)
AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA > SRR4302534.767464/1‑94 (MQ=60)
AACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGA > SRR4302534.2050203/1‑94 (MQ=60)
CAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATG > SRR4302534.3840093/1‑94 (MQ=60)
CAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATG > SRR4302534.6052521/1‑94 (MQ=60)
AGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGA > SRR4302534.2390282/1‑94 (MQ=60)
CGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATA > SRR4302534.2504607/1‑94 (MQ=60)
AGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAA > SRR4302534.3429407/1‑94 (MQ=60)
GATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAA > SRR4302534.6105091/1‑94 (MQ=60)
ATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAG > SRR4302534.4891745/1‑94 (MQ=60)
TGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAA > SRR4302534.57316/1‑94 (MQ=60)
TGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGGTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAA > SRR4302534.90423/1‑94 (MQ=60)
GAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAA < SRR4302534.6125182/94‑1 (MQ=60)
AACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATT > SRR4302534.4990786/1‑94 (MQ=60)
GGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCC < SRR4302534.4119398/94‑1 (MQ=60)
GCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCT < SRR4302534.2267764/94‑1 (MQ=60)
CGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTG > SRR4302534.6122629/1‑94 (MQ=60)
CGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTG < SRR4302534.5400989/94‑1 (MQ=60)
GAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGA < SRR4302534.1851718/94‑1 (MQ=60)
AGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGAT < SRR4302534.3745108/94‑1 (MQ=60)
GCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGC > SRR4302534.2330235/1‑94 (MQ=60)
CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG > SRR4302534.6331748/1‑94 (MQ=60)
CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG > SRR4302534.6204800/1‑94 (MQ=60)
CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG < SRR4302534.3077930/94‑1 (MQ=60)
CACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCG < SRR4302534.3835815/94‑1 (MQ=60)
CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT > SRR4302534.4015383/1‑94 (MQ=60)
CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT < SRR4302534.4422044/94‑1 (MQ=60)
CTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCT < SRR4302534.4824072/94‑1 (MQ=60)
TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA < SRR4302534.5592006/94‑1 (MQ=60)
TTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTA < SRR4302534.3810985/94‑1 (MQ=60)
TCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTAC > SRR4302534.313461/1‑94 (MQ=60)
CACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACG > SRR4302534.809906/1‑94 (MQ=60)
ACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGC > SRR4302534.4024298/1‑94 (MQ=60)
CATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCT > SRR4302534.520208/1‑94 (MQ=60)
ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTT < SRR4302534.417139/94‑1 (MQ=60)
ATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCCT > SRR4302534.6090970/1‑94 (MQ=60)
TTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCA < SRR4302534.4782237/94‑1 (MQ=60)
TTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAG > SRR4302534.1950111/1‑94 (MQ=60)
CGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGC > SRR4302534.1807538/1‑94 (MQ=60)
CGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGC < SRR4302534.4187623/94‑1 (MQ=60)
CGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGC > SRR4302534.4745715/1‑94 (MQ=60)
GGATTATGACAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTGCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTTCGCTTATCAGGCC < SRR4302534.5066730/94‑1 (MQ=60)
GATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCT < SRR4302534.3296587/94‑1 (MQ=60)
ATTATTGCAAATGAGTATAAAAAAACCGGGTTTCCCC‑GTTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA < SRR4302534.3642210/94‑1 (MQ=60)
ATTGCAAATGAGGATAAAAAATCCGGGTTGCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT < SRR4302534.6002920/94‑1 (MQ=60)
ATTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACAT < SRR4302534.2691743/94‑1 (MQ=60)
TTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATT < SRR4302534.6308095/94‑1 (MQ=60)
TTGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATT < SRR4302534.2806280/94‑1 (MQ=60)
TGCAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTT < SRR4302534.2234251/94‑1 (MQ=60)
CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCGGGCCTACATTTCC < SRR4302534.3455431/94‑1 (MQ=60)
CAAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCC > SRR4302534.5072398/1‑94 (MQ=60)
AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCT > SRR4302534.5602444/1‑94 (MQ=60)
AAATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCT > SRR4302534.6580272/1‑94 (MQ=60)
AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT > SRR4302534.553390/1‑94 (MQ=60)
AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT < SRR4302534.4180538/94‑1 (MQ=60)
AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT < SRR4302534.4040865/94‑1 (MQ=60)
AATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTT < SRR4302534.6408319/94‑1 (MQ=60)
ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG < SRR4302534.5325296/94‑1 (MQ=60)
ATGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTG > SRR4302534.3597155/1‑94 (MQ=60)
TGAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGC > SRR4302534.4665465/1‑94 (MQ=60)
GAGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCA > SRR4302534.3680647/1‑94 (MQ=60)
AGGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTTGCCA > SRR4302534.4670712/1‑94 (MQ=60)
GGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAT > SRR4302534.1191986/1‑94 (MQ=60)
GGATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAAT > SRR4302534.1225584/1‑94 (MQ=60)
GATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATA > SRR4302534.4540854/1‑94 (MQ=60)
ATAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAT > SRR4302534.2846415/1‑94 (MQ=60)
TAAAAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATG < SRR4302534.3195358/94‑1 (MQ=60)
AAAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGTTAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGC > SRR4302534.3753216/1‑94 (MQ=60)
AAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA > SRR4302534.5232075/1‑94 (MQ=60)
AAAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA > SRR4302534.1072877/1‑94 (MQ=60)
AAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAT > SRR4302534.2625954/1‑94 (MQ=60)
AAACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAT > SRR4302534.5677488/1‑94 (MQ=60)
AACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATT > SRR4302534.5589142/1‑94 (MQ=60)
ACCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTA > SRR4302534.3630822/1‑94 (MQ=60)
CCGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTAC > SRR4302534.1515200/1‑94 (MQ=60)
CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT > SRR4302534.2990363/1‑94 (MQ=60)
CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT > SRR4302534.3479299/1‑94 (MQ=60)
CGGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACT < SRR4302534.3164998/94‑1 (MQ=60)
GGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT < SRR4302534.2959409/94‑1 (MQ=60)
GGGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTT > SRR4302534.185523/1‑94 (MQ=60)
GGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT > SRR4302534.971875/1‑94 (MQ=60)
GGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT > SRR4302534.377451/1‑94 (MQ=60)
GGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT < SRR4302534.3174981/94‑1 (MQ=60)
GGTTTCCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTT < SRR4302534.2019243/94‑1 (MQ=60)
CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302534.6141029/1‑94 (MQ=60)
CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302534.390890/1‑94 (MQ=60)
CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302534.6485512/1‑94 (MQ=60)
CCCG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGC > SRR4302534.1067051/1‑94 (MQ=60)
CCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG < SRR4302534.3998997/94‑1 (MQ=60)
CCCCGG‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGG < SRR4302534.1595865/94‑1 (MQ=60)
CG‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCG > SRR4302534.4229845/1‑94 (MQ=60)
G‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTATGCCGG > SRR4302534.4707846/1‑94 (MQ=60)
G‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGG > SRR4302534.1169963/1‑94 (MQ=60)
G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA < SRR4302534.5179633/94‑1 (MQ=60)
G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA < SRR4302534.3960622/94‑1 (MQ=60)
G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA < SRR4302534.6603327/94‑1 (MQ=60)
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AAGATAAGGCGCAACAGCGAGATGTGGAAACGGCGAGGCACTTCACATTTTTTCGGATTATTGCAAATGAGGATAAAAAAACCGGGTTTCCCC‑G‑TTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGA > NC_000913/3510028‑3510214
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
