Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,610,653 |
A→G |
P18P (CCA→CCG) |
yhhU → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,610,653 | 0 | A | G | 100.0%
| 795.5
/ NA
| 229 | P18P (CCA→CCG) | yhhU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/95); total (134/95) |
Only 100 of 253 total aligned reads displayed.
TACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCT > NC_000913/3610563‑3610742
|
tacgCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTgccgcc > 2:4083386/1‑93 (MQ=255)
acgCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGccgccg < 2:2751588/93‑1 (MQ=255)
acgCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGccgccg > 2:2062335/1‑93 (MQ=255)
cACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGt < 1:790277/93‑1 (MQ=255)
cACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGt < 1:378457/93‑1 (MQ=255)
cACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGt > 2:2655087/1‑93 (MQ=255)
aCTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTTGGGAAAGTTTCGACCTTAAGCGGAGCTCCACTCCCGCCGGGtt > 2:4426700/1‑93 (MQ=255)
aCTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGtt < 2:104112/93‑1 (MQ=255)
aCTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGtt > 2:3362971/1‑93 (MQ=255)
aCTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGtt > 1:4061966/1‑93 (MQ=255)
aCTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGAAGCTCCACTGCCGCCGGGtt > 2:4284800/1‑93 (MQ=255)
cTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATTGTTCTGGGGAAAGTTTCGACCTTAAATGCAGCTCCACTGCCGCCGGGttt > 1:4243060/1‑93 (MQ=255)
tttCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTa > 2:3019322/1‑93 (MQ=255)
ttCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAc < 2:3475029/93‑1 (MQ=255)
cATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAcgc > 2:2255378/1‑93 (MQ=255)
aTTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAcgcg > 2:1244355/1‑93 (MQ=255)
aTTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAcgcg > 1:5229363/1‑93 (MQ=255)
aTTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAcgcg > 2:3989849/1‑93 (MQ=255)
ttttCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAGGCGa > 2:1834095/1‑93 (MQ=255)
tttCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAcccggg > 1:2572079/1‑91 (MQ=255)
tttCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGag > 2:6254747/1‑93 (MQ=255)
ttCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagc > 1:2031070/1‑93 (MQ=255)
tCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagca < 2:326459/93‑1 (MQ=255)
tCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagca > 2:1190049/1‑93 (MQ=255)
ccATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaa < 1:6365780/93‑1 (MQ=255)
ccATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaa < 2:468360/93‑1 (MQ=255)
aTTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaagc > 1:2946420/1‑93 (MQ=255)
aTTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaagc < 2:4927067/93‑1 (MQ=255)
aTTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaagc < 1:1446033/93‑1 (MQ=255)
aTTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGagcaagc < 1:1254315/93‑1 (MQ=255)
aCGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGc > 2:3450741/1‑93 (MQ=255)
ggCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGt > 1:2511939/1‑93 (MQ=255)
gCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTc < 2:564883/93‑1 (MQ=255)
cccTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTcc > 1:1639658/1‑93 (MQ=255)
ccTGATATGTATCGGATAGTTCTGGGGAAAGATTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTccg > 1:5680837/1‑92 (MQ=255)
tGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCcgcg > 1:4750121/1‑93 (MQ=255)
tGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCcgcg > 1:5302352/1‑93 (MQ=255)
tatGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCgcgacg > 2:2546635/1‑93 (MQ=255)
aTCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAAc < 2:817136/93‑1 (MQ=255)
aTCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAAc > 1:4451180/1‑93 (MQ=255)
tCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACg > 2:3805823/1‑93 (MQ=255)
tCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACg > 2:3914627/1‑93 (MQ=255)
cGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgc < 1:5918723/93‑1 (MQ=255)
gATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctg > 2:331002/1‑93 (MQ=255)
gATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctg < 2:1754252/93‑1 (MQ=255)
gATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctg > 1:4651735/1‑93 (MQ=255)
gATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctg > 2:5314884/1‑93 (MQ=255)
tAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctggc > 2:2273489/1‑93 (MQ=255)
aGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctggct < 2:560237/93‑1 (MQ=255)
aGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctggct > 1:3229541/1‑93 (MQ=255)
aGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACgctggct < 2:5009786/93‑1 (MQ=255)
ttCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGctggctgg < 2:5063239/93‑1 (MQ=255)
ttCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGctggctgg < 1:1987247/93‑1 (MQ=255)
ttCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGctggctgg > 1:2364430/1‑93 (MQ=255)
tCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCtggctggc < 2:4113664/93‑1 (MQ=255)
cTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCg < 1:5006161/93‑1 (MQ=255)
tGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCgg < 1:5888767/93‑1 (MQ=255)
ggggAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCggg > 2:1910610/1‑93 (MQ=255)
ggggAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCggg > 1:6031007/1‑93 (MQ=255)
ggggAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCggg < 1:120429/93‑1 (MQ=255)
gggAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCgggg < 2:6361619/93‑1 (MQ=255)
ggAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGc > 1:3130112/1‑93 (MQ=255)
gAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCg > 1:2693348/1‑93 (MQ=255)
aaaGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGt < 1:991876/93‑1 (MQ=255)
aaaCTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGt < 2:1679871/93‑1 (MQ=255)
aaGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTg < 2:1444638/93‑1 (MQ=255)
aaGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTg > 1:3671043/1‑93 (MQ=255)
aaGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGCCTGGCGGGGGGTg > 2:4253942/1‑93 (MQ=255)
aGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGgcgcgc > 1:3940248/1‑93 (MQ=255)
aGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGc < 2:1329144/93‑1 (MQ=255)
aGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGc > 1:2875479/1‑93 (MQ=255)
aGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTACGCGACGCGAACGCTGGCTGGCGGGGCGTGc > 2:2050798/1‑93 (MQ=255)
tttCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCAt < 1:4148015/93‑1 (MQ=255)
tCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTg > 1:4801902/1‑93 (MQ=255)
tCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTg > 1:5538628/1‑93 (MQ=255)
cGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGc < 2:6293896/93‑1 (MQ=255)
gACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGGGTGCCTTGCt > 1:1343667/1‑93 (MQ=255)
cTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCCTTGCTTTc > 1:667692/1‑93 (MQ=255)
cTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTc > 2:319864/1‑93 (MQ=255)
cTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTc < 2:5530164/93‑1 (MQ=255)
cTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTc < 1:5426217/93‑1 (MQ=255)
ttAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCg > 1:6118663/1‑93 (MQ=255)
aaGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCCTTGCTTTCGca > 2:5949365/1‑93 (MQ=255)
aaGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGca < 1:941833/93‑1 (MQ=255)
aGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCCTTTCTTTCGccc > 2:58840/1‑91 (MQ=255)
aGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGcac > 2:5153312/1‑93 (MQ=255)
gcAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCCCacacc > 2:1577942/1‑92 (MQ=255)
aGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCt < 2:2472708/93‑1 (MQ=255)
aGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCt < 1:4302636/93‑1 (MQ=255)
gCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCtt < 2:3606372/93‑1 (MQ=255)
tCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTc < 2:3628224/93‑1 (MQ=255)
ccACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTcc > 1:3434244/1‑93 (MQ=255)
ccACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTcc < 2:2143330/93‑1 (MQ=255)
cACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTccc > 2:3735735/1‑93 (MQ=255)
cACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTccc < 1:1884530/93‑1 (MQ=255)
cACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTccc < 2:2127023/93‑1 (MQ=255)
tGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCCTTGCTTTCGCCCACGCTTTCCCCGc > 2:4511875/1‑93 (MQ=255)
tGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGc < 2:1123092/93‑1 (MQ=255)
cgccgccGGCTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGc < 2:1744590/92‑1 (MQ=255)
gccgccGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCt > 2:6355938/1‑93 (MQ=255)
|
TACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCT > NC_000913/3610563‑3610742
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCG > NC_000913/3610560‑3610746
|
CGATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCG > SRR4302534.844595/1‑94 (MQ=60)
ATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCC > SRR4302534.6146753/1‑94 (MQ=60)
ATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCC < SRR4302534.6528722/94‑1 (MQ=60)
TACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCG > SRR4302534.6061396/1‑94 (MQ=60)
CGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGGCGCCGGG > SRR4302534.4225561/1‑94 (MQ=60)
CGCAATTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGACAGTTTCGACCTTAAGCGCCGCTCCACTGCCGCCGAG > SRR4302534.1763106/1‑94 (MQ=60)
GCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGT > SRR4302534.5565356/1‑94 (MQ=60)
CACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTT < SRR4302534.388133/94‑1 (MQ=60)
CACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTT < SRR4302534.810062/94‑1 (MQ=60)
CACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTT > SRR4302534.4170938/1‑94 (MQ=60)
ACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATTGTTCTGGGGAAAGTTTCGACCTTAAATGCAGCTCCACTGCCGCCGGGTTT > SRR4302534.4357484/1‑94 (MQ=60)
ACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTT > SRR4302534.1956655/1‑94 (MQ=60)
TTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTAC < SRR4302534.5197583/94‑1 (MQ=60)
TTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACG < SRR4302534.466230/94‑1 (MQ=60)
CATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCG > SRR4302534.5370541/1‑94 (MQ=60)
CATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGCTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCG > SRR4302534.688819/1‑94 (MQ=60)
TTTTCCATTAAACGTTGGCCCTGATATTTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCAGCCGGGTTTACGCGAG < SRR4302534.928008/94‑1 (MQ=60)
TTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACccggg > SRR4302534.2640239/1‑89 (MQ=60)
TTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGC < SRR4302534.5897392/94‑1 (MQ=60)
TTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGC > SRR4302534.2084184/1‑94 (MQ=60)
TTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACAGCCGCCGGGTGTACGCGAGC < SRR4302534.6493854/94‑1 (MQ=60)
TCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAA > SRR4302534.875379/1‑94 (MQ=60)
CCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAG < SRR4302534.6537678/94‑1 (MQ=60)
CCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAG < SRR4302534.2080452/94‑1 (MQ=60)
CATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGC > SRR4302534.3023730/1‑94 (MQ=60)
ATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCA < SRR4302534.1484093/94‑1 (MQ=60)
ATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCA < SRR4302534.1287375/94‑1 (MQ=60)
ATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCA > SRR4302534.4682788/1‑94 (MQ=60)
TTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCAC < SRR4302534.4504790/94‑1 (MQ=60)
TAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACC > SRR4302534.4117362/1‑94 (MQ=60)
TAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTATCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACC < SRR4302534.6551870/94‑1 (MQ=60)
GAACGTTGGCCCTTATATGTATCGGATAGTTCTGGGGATAGTTTCGACCTTAAGCGCAGCGCCACTGCCGCCGGGTTTACGCGAGCAAGCACCG < SRR4302534.3705091/94‑1 (MQ=60)
AAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCG > SRR4302534.2661414/1‑94 (MQ=60)
AACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGAACCGA > SRR4302534.2992925/1‑94 (MQ=60)
ACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGGTTACGCGAGCAAGCACCGCA > SRR4302534.4388202/1‑94 (MQ=60)
GTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAG > SRR4302534.1004752/1‑94 (MQ=60)
GTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAG > SRR4302534.1374963/1‑94 (MQ=60)
TTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGG > SRR4302534.2393785/1‑94 (MQ=60)
TTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGG > SRR4302534.5616954/1‑94 (MQ=60)
TGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGT > SRR4302534.3986557/1‑94 (MQ=60)
TGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGT > SRR4302534.2578628/1‑94 (MQ=60)
GCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCC > SRR4302534.2803840/1‑94 (MQ=60)
GCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCC > SRR4302534.1682417/1‑94 (MQ=60)
CCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCG < SRR4302534.3899096/94‑1 (MQ=60)
CCCTGATATGTATCGGATAGTTCTGGGGAAAGATTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCG > SRR4302534.5834660/1‑94 (MQ=60)
CCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGC < SRR4302534.3378410/94‑1 (MQ=60)
CCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGC > SRR4302534.1990382/1‑94 (MQ=60)
CTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCG > SRR4302534.5445426/1‑94 (MQ=60)
CTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCG > SRR4302534.4879059/1‑94 (MQ=60)
ATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACG > SRR4302534.6184073/1‑94 (MQ=60)
TATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGC < SRR4302534.1616943/94‑1 (MQ=60)
GTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAA < SRR4302534.3110968/94‑1 (MQ=60)
TATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAAC > SRR4302534.4571490/1‑94 (MQ=60)
ATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACG > SRR4302534.1404358/1‑94 (MQ=60)
TCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGC > SRR4302534.3748029/1‑94 (MQ=60)
CGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCT < SRR4302534.6079431/94‑1 (MQ=60)
CGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCT < SRR4302534.4221165/94‑1 (MQ=60)
CGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCT < SRR4302534.3070043/94‑1 (MQ=60)
GGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTG > SRR4302534.1608567/1‑94 (MQ=60)
GGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTG > SRR4302534.4778021/1‑94 (MQ=60)
GGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTG > SRR4302534.5858898/1‑94 (MQ=60)
GATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGG < SRR4302534.2632000/94‑1 (MQ=60)
TAGTTCTGGGGAAAGTTTCGACCTTAAGCTCAGCTCCACTCCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCT < SRR4302534.2502661/94‑1 (MQ=60)
TAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCT > SRR4302534.3315357/1‑94 (MQ=60)
TAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCT < SRR4302534.1364020/94‑1 (MQ=60)
AGTGCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGACCGCGACGCGAACGCTGGCTG < SRR4302534.6263212/94‑1 (MQ=60)
GTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGG > SRR4302534.2427196/1‑94 (MQ=60)
TTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGC < SRR4302534.2039287/94‑1 (MQ=60)
TCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCG > SRR4302534.5824532/1‑94 (MQ=60)
CTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGG < SRR4302534.5141473/94‑1 (MQ=60)
CTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGG > SRR4302534.3426591/1‑94 (MQ=60)
ttggtaaagtgtcgccctaAAGCGCAGCTCCACTGCCGCCTGGTTTACGCGAGCAAGCGCCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGG < SRR4302534.3283486/75‑1 (MQ=60)
TGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGG < SRR4302534.2607133/94‑1 (MQ=60)
TGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGG < SRR4302534.6048658/94‑1 (MQ=60)
TGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGG > SRR4302534.6194892/1‑94 (MQ=60)
GGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGG < SRR4302534.123620/94‑1 (MQ=60)
GGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGG > SRR4302534.686522/1‑94 (MQ=60)
GGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGG > SRR4302534.4882752/1‑94 (MQ=60)
GGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGC > SRR4302534.3212391/1‑94 (MQ=60)
ggaaatgatgtACCTTCAGCGCAGCGCCACTTCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCG < SRR4302534.5103112/83‑1 (MQ=60)
GGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCG > SRR4302534.2764511/1‑94 (MQ=60)
aaaatTTTCGACCTAAAGCGCAGCCCCACTGCCGCCGGTTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCaaacccggcggcagt < SRR4302534.197570/89‑16 (MQ=60)
GAAAGTTTCGACCTTAAGCGCAGCTCCACTCCCGCCGGGTTTACGCGAGCACGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGT < SRR4302534.4330282/94‑1 (MQ=60)
AAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTG > SRR4302534.3769736/1‑94 (MQ=60)
AAAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTG < SRR4302534.1017257/94‑1 (MQ=60)
AAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGC > SRR4302534.2950972/1‑94 (MQ=60)
AAGTTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGCGC > SRR4302534.4045771/1‑94 (MQ=60)
TTTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATT < SRR4302534.4259985/94‑1 (MQ=60)
TTTCGACCTTAAGCGCAGCCCCACTGCCGCCGGGTCTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGACCGCTGGCTGGCTGAGCGTGCATT < SRR4302534.3283638/94‑1 (MQ=60)
TTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTG > SRR4302534.4932288/1‑94 (MQ=60)
TTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTG > SRR4302534.4882205/1‑94 (MQ=60)
TTCGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTG > SRR4302534.5688134/1‑94 (MQ=60)
CGGCCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGGGCATTGCT > SRR4302534.6345659/1‑94 (MQ=60)
CGACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGGGTGCCTTGCT > SRR4302534.1379100/1‑94 (MQ=60)
GACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGgct > SRR4302534.5173879/1‑91 (MQ=60)
ACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTT > SRR4302534.127674/1‑94 (MQ=60)
ACCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTT > SRR4302534.4413978/1‑94 (MQ=60)
CCTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCCTTGCTTTC > SRR4302534.683957/1‑94 (MQ=60)
CTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCG > SRR4302534.6285101/1‑94 (MQ=60)
CTTAAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCG < SRR4302534.5572256/94‑1 (MQ=60)
AAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCAC < SRR4302534.965788/94‑1 (MQ=60)
AAGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCAC > SRR4302534.547581/1‑94 (MQ=60)
AGCGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACA < SRR4302534.1008494/94‑1 (MQ=60)
CGCAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGGATTGCTTTCCCACACC > SRR4302534.2421747/1‑94 (MQ=60)
CAGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCCCACGCT > SRR4302534.4842481/1‑94 (MQ=60)
AGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTT < SRR4302534.3231613/94‑1 (MQ=60)
AGCTCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTT < SRR4302534.4419279/94‑1 (MQ=60)
TCCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCC > SRR4302534.3526520/1‑94 (MQ=60)
CCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCC > SRR4302534.377998/1‑94 (MQ=60)
CCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCC < SRR4302534.368296/94‑1 (MQ=60)
CCACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCC > SRR4302534.5003050/1‑94 (MQ=60)
CACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGATGCGAACGCTGGCTGGCGCGGCGTagcttgctttgccaggcggattgccc > SRR4302534.1825181/1‑68 (MQ=60)
CACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCC < SRR4302534.1933643/94‑1 (MQ=60)
ACTGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCG < SRR4302534.5387528/94‑1 (MQ=60)
TGCCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCT > SRR4302534.2859410/1‑94 (MQ=60)
GCCGCTGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTA < SRR4302534.202027/94‑1 (MQ=60)
CCGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTAC < SRR4302534.3059302/94‑1 (MQ=60)
CGCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGGGTGCATTGCTTTCGCACACGCTTTCCCCGCTACC > SRR4302534.224807/1‑94 (MQ=60)
CGCCGGGTGTACGCGAGCAAGCACCGCAAGGTCGGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACC < SRR4302534.4984882/94‑1 (MQ=60)
GCCGGGTTTACGCGAGCAAGCACCGCAAGGTCCGCGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCG > SRR4302534.4979765/1‑94 (MQ=60)
|
CGATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCG > NC_000913/3610560‑3610746
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
