Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,654,259 |
T→C |
T38A (ACC→GCC) |
hdeA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,654,259 | 0 | T | C | 100.0%
| 714.1
/ NA
| 207 | T38A (ACC→GCC) | hdeA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/109); total (98/109) |
Only 100 of 214 total aligned reads displayed.
CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA > NC_000913/3654169‑3654348
|
cttctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGccc < 2:3563047/93‑1 (MQ=255)
ctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAgg < 2:1156635/93‑1 (MQ=255)
ctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAgg < 1:1707582/93‑1 (MQ=255)
ctGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAACCTTCACAGGCCCAgg > 1:5418863/1‑93 (MQ=255)
tGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGa < 1:2006057/93‑1 (MQ=255)
ggTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAg > 2:5285291/1‑93 (MQ=255)
gTTTATCTTTGTTGTTGAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGt > 1:5111629/1‑93 (MQ=255)
tttATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGtt > 2:3509118/1‑93 (MQ=255)
ttATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTg < 1:1455864/93‑1 (MQ=255)
tATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCGGGAGTTGa < 2:6133194/93‑1 (MQ=255)
tATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGa < 1:229757/93‑1 (MQ=255)
aTCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAc < 2:6304715/93‑1 (MQ=255)
tttGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCgg > 2:1217409/1‑93 (MQ=255)
ttgttgTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGt < 2:4761881/93‑1 (MQ=255)
tgttgtTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGtt < 1:1384469/93‑1 (MQ=255)
gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt > 1:2426786/1‑93 (MQ=255)
gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt < 2:202937/93‑1 (MQ=255)
gttgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttt < 2:4068000/93‑1 (MQ=255)
tgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttttt < 2:2261036/93‑1 (MQ=255)
tgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttttt < 1:3227499/93‑1 (MQ=255)
tgttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGttttt < 2:1997782/93‑1 (MQ=255)
gttCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACTGGtttttt < 1:6289776/93‑1 (MQ=255)
tCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGt > 2:742714/1‑93 (MQ=255)
aGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTa > 2:3144159/1‑93 (MQ=255)
gcgcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTAt > 2:5566593/1‑93 (MQ=255)
cgcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATc < 1:3199235/93‑1 (MQ=255)
cgcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATc < 1:4142970/93‑1 (MQ=255)
gcTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTAACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCa > 2:862872/1‑93 (MQ=255)
cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg > 2:2713227/1‑93 (MQ=255)
cTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAg > 2:698047/1‑93 (MQ=255)
ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc < 1:875985/93‑1 (MQ=255)
ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc < 1:5762794/93‑1 (MQ=255)
ttCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgc < 2:1246015/93‑1 (MQ=255)
tCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgct < 1:2952942/93‑1 (MQ=255)
aGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgc > 2:4650813/1‑93 (MQ=255)
aGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgc > 1:6417922/1‑93 (MQ=255)
gCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct < 1:5268004/93‑1 (MQ=255)
gCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct < 1:6185661/93‑1 (MQ=255)
gCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAgctgct < 2:4050806/93‑1 (MQ=255)
aaaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCttt > 1:5952428/1‑93 (MQ=255)
aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtttt > 1:4858103/1‑93 (MQ=255)
aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtttt > 2:2747138/1‑93 (MQ=255)
aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtttt < 1:5685065/93‑1 (MQ=255)
aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCtttt > 1:1120830/1‑93 (MQ=255)
aaaCCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGCTATCAGCTGCtttt > 2:3647524/1‑93 (MQ=255)
aaCCAACTGCAGTTGCCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCCGGAGTTGACAGGTTTTTTGTTATCCGCTGGttttt > 1:1029752/1‑93 (MQ=255)
ccAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgc < 1:3810340/93‑1 (MQ=255)
cAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgcg < 2:3830144/93‑1 (MQ=255)
aaCTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTgcgc > 2:2859489/1‑93 (MQ=255)
aCTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCa > 2:233785/1‑93 (MQ=255)
aCTGCAGTTGGCTGGAAGGATTCGTCCACAACCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCa > 1:533660/1‑93 (MQ=255)
aCTGCAGTTGGCTGGAAGATTTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCa > 1:3361624/1‑93 (MQ=255)
cTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAt > 2:1930203/1‑93 (MQ=255)
cTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAt < 2:5920499/93‑1 (MQ=255)
tGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATc < 2:2218888/93‑1 (MQ=255)
tGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATc > 1:850601/1‑93 (MQ=255)
gCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATcc < 1:710958/93‑1 (MQ=255)
gCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATcc > 2:6269268/1‑93 (MQ=255)
cAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCg < 1:1899030/93‑1 (MQ=255)
cAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCg > 2:4427513/1‑93 (MQ=255)
aGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGc < 2:912645/93‑1 (MQ=255)
gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt > 2:1776655/1‑93 (MQ=255)
gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt > 1:6465383/1‑93 (MQ=255)
gTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCt > 2:2050755/1‑93 (MQ=255)
cTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCAtt > 1:5610299/1‑93 (MQ=255)
ggAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGc > 2:4879931/1‑93 (MQ=255)
ggAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGc < 1:5044321/93‑1 (MQ=255)
gAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCt > 1:216711/1‑93 (MQ=255)
gAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCt > 1:3542678/1‑93 (MQ=255)
aaGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTc < 2:380147/93‑1 (MQ=255)
aaGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTc > 2:3750772/1‑93 (MQ=255)
aGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca > 2:1107694/1‑93 (MQ=255)
aGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTca > 2:568560/1‑93 (MQ=255)
ggATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcac > 1:3300570/1‑93 (MQ=255)
ggATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTcac < 1:2713227/93‑1 (MQ=255)
aTTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACaa < 2:4810280/93‑1 (MQ=255)
ttCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAc < 2:4023818/93‑1 (MQ=255)
ttCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAc < 1:5101555/93‑1 (MQ=255)
ttCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAc > 2:5390012/1‑93 (MQ=255)
tCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACt < 1:3096276/93‑1 (MQ=255)
gTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTgg < 1:3760603/93‑1 (MQ=255)
tCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGc > 1:4240208/1‑93 (MQ=255)
cacaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCag > 1:355032/1‑93 (MQ=255)
cacaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCag < 1:2390029/93‑1 (MQ=255)
ccaGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCaga < 2:3262533/92‑1 (MQ=255)
caGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCagaa < 1:6056594/93‑1 (MQ=255)
ccAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAgaagaa < 1:4107679/93‑1 (MQ=255)
aGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGc > 1:1792546/1‑93 (MQ=255)
ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa > 1:6100260/1‑93 (MQ=255)
ggAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCa < 1:5676663/93‑1 (MQ=255)
gAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAg < 1:2118254/93‑1 (MQ=255)
aTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGacc < 1:6366547/93‑1 (MQ=255)
aTCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGacc < 2:4101747/93‑1 (MQ=255)
cTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGaccac < 2:5049790/93‑1 (MQ=255)
cacaGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCaa < 1:3315571/93‑1 (MQ=255)
acaGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAg > 1:6026218/1‑93 (MQ=255)
acaGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAg < 2:1472941/93‑1 (MQ=255)
aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa < 2:6459012/93‑1 (MQ=255)
aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa < 2:5478847/93‑1 (MQ=255)
aGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGaa < 1:1630782/93‑1 (MQ=255)
|
CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA > NC_000913/3654169‑3654348
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA > NC_000913/3654166‑3654350
|
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGC > SRR4302534.1125985/1‑94 (MQ=60)
CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGC > SRR4302534.3418143/1‑94 (MQ=60)
TCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCC < SRR4302534.403775/94‑1 (MQ=60)
CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCA < SRR4302534.6237846/94‑1 (MQ=60)
CTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCA < SRR4302534.2354578/94‑1 (MQ=60)
TCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGG > SRR4302534.3682228/1‑94 (MQ=60)
TCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGG < SRR4302534.1861140/94‑1 (MQ=60)
TCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAACCTTCACAGGCCCAGG > SRR4302534.5564669/1‑94 (MQ=60)
CTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGA < SRR4302534.1751968/94‑1 (MQ=60)
TGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAG < SRR4302534.2058555/94‑1 (MQ=60)
TGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAG > SRR4302534.3608709/1‑94 (MQ=60)
GGTTTATCTTTGTTGTTGAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGT > SRR4302534.5249577/1‑94 (MQ=60)
GTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTT < SRR4302534.5825931/94‑1 (MQ=60)
GTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTT > SRR4302534.6132193/1‑94 (MQ=60)
TTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGA < SRR4302534.1494168/94‑1 (MQ=60)
TTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGA < SRR4302534.1126065/94‑1 (MQ=60)
TATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAC < SRR4302534.235759/94‑1 (MQ=60)
TATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAC > SRR4302534.5211373/1‑94 (MQ=60)
TATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGAC < SRR4302534.6278465/94‑1 (MQ=60)
CTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGG > SRR4302534.2113665/1‑94 (MQ=60)
CTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGG > SRR4302534.3465068/1‑94 (MQ=60)
CTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGG > SRR4302534.2410068/1‑94 (MQ=60)
TGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTT < SRR4302534.4924390/94‑1 (MQ=60)
TGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTT > SRR4302534.2181752/1‑94 (MQ=60)
TGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTT > SRR4302534.2491313/1‑94 (MQ=60)
TGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTT < SRR4302534.1420922/94‑1 (MQ=60)
TGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTT < SRR4302534.3313248/94‑1 (MQ=60)
GTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACTGGTTTTTTG < SRR4302534.6459955/94‑1 (MQ=60)
TTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGT > SRR4302534.5481176/1‑94 (MQ=60)
TCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTT > SRR4302534.795509/1‑94 (MQ=60)
CAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTA < SRR4302534.5831833/94‑1 (MQ=60)
CGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCA < SRR4302534.4254775/94‑1 (MQ=60)
CGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCA < SRR4302534.3284054/94‑1 (MQ=60)
GCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAG > SRR4302534.2890259/1‑94 (MQ=60)
TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCT < SRR4302534.5919126/94‑1 (MQ=60)
TTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCT < SRR4302534.898143/94‑1 (MQ=60)
TCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTG < SRR4302534.3030363/94‑1 (MQ=60)
TCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTG < SRR4302534.5684669/94‑1 (MQ=60)
CAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGC > SRR4302534.6591057/1‑94 (MQ=60)
GCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTT < SRR4302534.6354010/94‑1 (MQ=60)
GCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTT < SRR4302534.5410304/94‑1 (MQ=60)
CAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTT > SRR4302534.6114054/1‑94 (MQ=60)
CAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTT > SRR4302534.51594/1‑94 (MQ=60)
AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT > SRR4302534.1150117/1‑94 (MQ=60)
AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT > SRR4302534.3280728/1‑94 (MQ=60)
AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT > SRR4302534.6258960/1‑94 (MQ=60)
AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT > SRR4302534.5910356/1‑94 (MQ=60)
AAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTT > SRR4302534.4989906/1‑94 (MQ=60)
AAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTT > SRR4302534.1462269/1‑94 (MQ=60)
AAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTT < SRR4302534.5839015/94‑1 (MQ=60)
AAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTT < SRR4302534.2717079/94‑1 (MQ=60)
AAACCAACTGCAGTTGCCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCCGGAGTTGACAGGTTTTTTGTTATCCGCTGGTTTTT > SRR4302534.1056279/1‑94 (MQ=60)
ACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGC < SRR4302534.6607092/94‑1 (MQ=60)
CCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCG < SRR4302534.3912655/94‑1 (MQ=60)
AACTGCAGTTGGCTGGAAGGATTCGTCCACAACCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCA > SRR4302534.546909/1‑94 (MQ=60)
AACTGCAGTTGGCTGGAAGATTTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCA > SRR4302534.3451667/1‑94 (MQ=60)
AACGGTAGTTGGCTGGAAAGATTCGTCCACAGCCAGGAAATCCTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCA < SRR4302534.1567974/94‑1 (MQ=60)
ACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCAT > SRR4302534.3011908/1‑94 (MQ=60)
CTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATC > SRR4302534.872050/1‑94 (MQ=60)
GCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCG < SRR4302534.728419/94‑1 (MQ=60)
GCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCG < SRR4302534.6193509/94‑1 (MQ=60)
CAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGC > SRR4302534.3644131/1‑94 (MQ=60)
CAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGC < SRR4302534.1948558/94‑1 (MQ=60)
AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT < SRR4302534.1796988/94‑1 (MQ=60)
AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT > SRR4302534.6639525/1‑94 (MQ=60)
AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT < SRR4302534.5733514/94‑1 (MQ=60)
AGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGGTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCT > SRR4302534.3425931/1‑94 (MQ=60)
TGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTTCGCATCCGCTGCT > SRR4302534.2021647/1‑94 (MQ=60)
TGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCA < SRR4302534.4047955/94‑1 (MQ=60)
GCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATT > SRR4302534.5762068/1‑94 (MQ=60)
GCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATT < SRR4302534.4742444/94‑1 (MQ=60)
CTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTG > SRR4302534.5467888/1‑94 (MQ=60)
TGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC > SRR4302534.3389860/1‑94 (MQ=60)
TGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGC > SRR4302534.3058148/1‑94 (MQ=60)
GGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCT > SRR4302534.3637979/1‑94 (MQ=60)
GGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCT > SRR4302534.222392/1‑94 (MQ=60)
GGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCT < SRR4302534.5180535/94‑1 (MQ=60)
AGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCAC > SRR4302534.2488612/1‑94 (MQ=60)
AGGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCAC > SRR4302534.3388663/1‑94 (MQ=60)
GGATTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACA < SRR4302534.2784859/94‑1 (MQ=60)
ATTCGTCCACAGCCAGAAAATCTTCACAGGCCCAGGAGTTGACGGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAAC < SRR4302534.6550627/94‑1 (MQ=60)
TTCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACT < SRR4302534.5239250/94‑1 (MQ=60)
TCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTG < SRR4302534.3177725/94‑1 (MQ=60)
TCGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTG < SRR4302534.1170491/94‑1 (MQ=60)
CGTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGG > SRR4302534.3904892/1‑94 (MQ=60)
GTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGC > SRR4302534.4354530/1‑94 (MQ=60)
GTCCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGC < SRR4302534.3861576/94‑1 (MQ=60)
CCACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAG > SRR4302534.364113/1‑94 (MQ=60)
CACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGA < SRR4302534.2453538/94‑1 (MQ=60)
ACAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAA < SRR4302534.728572/94‑1 (MQ=60)
CAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAG < SRR4302534.6221294/94‑1 (MQ=60)
CAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAG < SRR4302534.338278/94‑1 (MQ=60)
CAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAG > SRR4302534.4238817/1‑94 (MQ=60)
CAGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAG < SRR4302534.5246035/94‑1 (MQ=60)
AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA < SRR4302534.4298319/94‑1 (MQ=60)
AGCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGA > SRR4302534.719902/1‑94 (MQ=60)
GCCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAA < SRR4302534.6073653/94‑1 (MQ=60)
CCGGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAG > SRR4302534.5257452/1‑94 (MQ=60)
CCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAG < SRR4302534.6468398/94‑1 (MQ=60)
CCAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAG < SRR4302534.4218164/94‑1 (MQ=60)
CAGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGC > SRR4302534.1839102/1‑94 (MQ=60)
AGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCA > SRR4302534.6266142/1‑94 (MQ=60)
AGGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCA > SRR4302534.1585881/1‑94 (MQ=60)
GGAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAG < SRR4302534.5830350/94‑1 (MQ=60)
GAAATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGA < SRR4302534.2174010/94‑1 (MQ=60)
AATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACC < SRR4302534.3288877/94‑1 (MQ=60)
ATCTTCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCA < SRR4302534.6538459/94‑1 (MQ=60)
TCACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAA > SRR4302534.888516/1‑94 (MQ=60)
CACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAG > SRR4302534.6189979/1‑94 (MQ=60)
CACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAG < SRR4302534.3404176/94‑1 (MQ=60)
CACAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAG < SRR4302534.6416175/94‑1 (MQ=60)
CAGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAA > SRR4302534.2024557/1‑94 (MQ=60)
AGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAAT < SRR4302534.1751284/94‑1 (MQ=60)
AGGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAAT < SRR4302534.1673302/94‑1 (MQ=60)
GGCCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA > SRR4302534.2863054/1‑94 (MQ=60)
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CATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCAGGAGTTGACCGGTTTTTTGTTATCAGCTGCTTTTTGCGCATCCGCTGCATTGCTCACAACTGGCAGAAGAAGCAGACCACCAAGAATA > NC_000913/3654166‑3654350
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
