Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,764,283 |
T→C |
V107A (GTT→GCT) |
yibA → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,764,283 | 0 | T | C | 100.0%
| 708.0
/ NA
| 213 | V107A (GTT→GCT) | yibA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/105); total (108/105) |
Only 100 of 214 total aligned reads displayed.
TACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTG > NC_000913/3764193‑3764372
|
aCTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCg < 2:2468814/93‑1 (MQ=255)
cTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGa < 2:703997/93‑1 (MQ=37)
cTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGa > 1:5335959/1‑93 (MQ=255)
tCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAg > 2:618557/1‑93 (MQ=255)
cGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGc > 2:2385779/1‑93 (MQ=255)
gggCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCt < 1:1486064/93‑1 (MQ=255)
ggCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTa < 2:5786748/93‑1 (MQ=255)
ggCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTa < 2:4789899/93‑1 (MQ=37)
gCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTAc > 2:1377815/1‑93 (MQ=255)
cAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACg > 1:3450253/1‑93 (MQ=255)
aaaTAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACgg > 2:5589299/1‑93 (MQ=255)
tAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCaa < 2:2637128/93‑1 (MQ=255)
aaaaTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATc < 2:1759454/93‑1 (MQ=25)
aaaTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCg < 2:5389985/93‑1 (MQ=21)
aaTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGa < 2:3291448/93‑1 (MQ=18)
aTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAg > 2:3069482/1‑93 (MQ=18)
aTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAg < 1:2621421/93‑1 (MQ=21)
aTTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAg < 2:3597271/93‑1 (MQ=21)
tttGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGt > 2:850597/1‑93 (MQ=18)
ttGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTc < 1:5175751/93‑1 (MQ=18)
gCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCaa < 1:2969261/93‑1 (MQ=18)
gCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCaa < 2:508120/93‑1 (MQ=21)
cAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAAc < 1:3542018/93‑1 (MQ=21)
cAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAAc < 2:3903649/93‑1 (MQ=21)
cAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAAc < 2:3506379/93‑1 (MQ=18)
cAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAAc < 2:1875632/93‑1 (MQ=21)
aaaaaaTGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACg > 2:1946493/1‑93 (MQ=18)
aaaaaaGCCGAAGTTAATTTTTTAAATATTTGGACCAATATGG‑AATGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACgg < 2:1099331/93‑1 (MQ=11)
aaaaTGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGc > 1:2171432/1‑93 (MQ=18)
aaaTGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCt > 2:15811/1‑93 (MQ=25)
aaTGCGAAGATAATGTTTTTAATATTTTGAACAATTTGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTc > 2:4997703/1‑93 (MQ=255)
aTGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCtta < 1:6372280/93‑3 (MQ=19)
aTGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCa > 1:2950366/1‑93 (MQ=255)
gAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGa > 1:4159179/1‑93 (MQ=255)
gAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGa < 2:2347505/93‑1 (MQ=255)
aGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATg < 2:3390830/93‑1 (MQ=255)
aGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATg < 1:3038260/93‑1 (MQ=255)
aGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATg > 1:4556630/1‑93 (MQ=255)
aTAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCa > 1:4697704/1‑93 (MQ=255)
tAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCaa > 1:5536685/1‑93 (MQ=255)
tAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCaa > 1:5984742/1‑93 (MQ=255)
tAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCaa < 2:5655612/93‑1 (MQ=255)
tAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCaa < 2:5721089/93‑1 (MQ=255)
tAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCaa < 1:1280693/93‑1 (MQ=255)
aaTGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAg < 1:4427777/93‑1 (MQ=255)
ttttAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGaaaaa < 1:3127126/93‑1 (MQ=255)
tttAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAAc < 2:814615/93‑1 (MQ=255)
aaTATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCa < 1:5592888/93‑1 (MQ=255)
aaTATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCa > 1:3793715/1‑93 (MQ=255)
tatTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAAt < 1:3367656/93‑1 (MQ=255)
tatTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAAt < 1:3885263/93‑1 (MQ=255)
atTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAAtt < 1:1158729/93‑1 (MQ=255)
atTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAAtt > 1:6162680/1‑93 (MQ=255)
ttttGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCCACGGCTCAGCGATGCAAGAAAAACCCAAttt > 1:5683308/1‑93 (MQ=255)
ttttGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAAttt > 2:1051622/1‑93 (MQ=255)
tttGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTa < 2:6239425/93‑1 (MQ=255)
tttGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTa < 1:1405203/93‑1 (MQ=255)
tttGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTa > 1:5162329/1‑93 (MQ=255)
tGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTAtt < 1:870005/93‑1 (MQ=255)
gAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTc < 1:4191050/93‑1 (MQ=255)
gAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTc < 1:1835633/93‑1 (MQ=255)
gAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTc > 1:2319053/1‑93 (MQ=255)
aCAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCAc > 2:2066937/1‑93 (MQ=255)
cAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCAcc < 1:3950805/93‑1 (MQ=255)
aacatGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCt < 2:4978232/90‑1 (MQ=255)
aaTATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCt < 1:1003137/93‑1 (MQ=255)
aaTATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCt > 1:408512/1‑93 (MQ=255)
aaTATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCt < 2:4020953/93‑1 (MQ=255)
aaTATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCt > 1:2687048/1‑93 (MQ=255)
atatGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTa > 2:6125777/1‑93 (MQ=255)
atatGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTa > 1:1254750/1‑93 (MQ=255)
atatGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTa > 1:1518786/1‑93 (MQ=255)
atGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTaaa > 2:756600/1‑93 (MQ=255)
tGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTaaaa < 1:5081045/93‑1 (MQ=255)
ggCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAt < 2:1120253/93‑1 (MQ=255)
ggCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAt > 2:4390847/1‑93 (MQ=255)
ggCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAt > 2:4661923/1‑93 (MQ=255)
cATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtag > 2:519796/1‑93 (MQ=255)
cATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtag > 2:2776898/1‑93 (MQ=255)
cATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtag > 2:4476634/1‑93 (MQ=255)
aTTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtagt > 2:1718053/1‑93 (MQ=255)
ttGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtagta > 1:2456294/1‑93 (MQ=255)
tGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAtagtag > 2:280838/1‑93 (MQ=255)
gAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGa < 1:5468283/93‑1 (MQ=255)
aTGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAAc > 1:6320447/1‑93 (MQ=255)
aTGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAAc < 2:4070025/93‑1 (MQ=255)
gATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACaa > 2:2246861/1‑93 (MQ=255)
aaGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAAtct < 2:4314216/93‑1 (MQ=255)
aaGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAAtct < 1:1982921/93‑1 (MQ=255)
agagCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAAtctc < 1:4676751/93‑1 (MQ=255)
agagCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAAtctc > 2:4860411/1‑93 (MQ=255)
gagCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCa > 1:1604718/1‑93 (MQ=255)
agCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCaa > 1:5749534/1‑93 (MQ=255)
gcgcTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCaaa > 2:2153086/1‑93 (MQ=255)
cgcTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAAAGTAGAACAATCTCAAAt < 2:5172202/93‑1 (MQ=255)
gcTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAAtt > 2:5953353/1‑93 (MQ=255)
cTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTa > 2:3854934/1‑93 (MQ=255)
cTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTa < 2:3163448/93‑1 (MQ=255)
ttGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTAc < 1:5560979/93‑1 (MQ=255)
ttGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTAc > 2:3169561/1‑93 (MQ=255)
|
TACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTG > NC_000913/3764193‑3764372
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTT > NC_000913/3764191‑3764375
|
TATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCT > SRR4302534.1002081/1‑94 (MQ=26)
TATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCT > SRR4302534.1274953/1‑94 (MQ=26)
ATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTC < SRR4302534.5936971/94‑1 (MQ=26)
ATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTC < SRR4302534.1226107/94‑1 (MQ=26)
ACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGA > SRR4302534.5479835/1‑94 (MQ=25)
CTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAG < SRR4302534.4644771/94‑1 (MQ=25)
TCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGC < SRR4302534.2894829/94‑1 (MQ=25)
GGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTA < SRR4302534.1525158/94‑1 (MQ=25)
GGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTAC < SRR4302534.4713124/94‑1 (MQ=25)
TCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACG > SRR4302534.5749363/1‑94 (MQ=25)
GCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACG > SRR4302534.3542999/1‑94 (MQ=25)
GCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACG < SRR4302534.3034349/94‑1 (MQ=25)
AAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGC > SRR4302534.1298095/1‑94 (MQ=25)
AATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCA > SRR4302534.2624976/1‑94 (MQ=25)
AAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATC > SRR4302534.5276755/1‑94 (MQ=15)
AATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAG < SRR4302534.4948705/94‑1 (MQ=10)
ATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGT < SRR4302534.2690784/94‑1 (MQ=10)
TTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCA < SRR4302534.5315219/94‑1 (MQ=10)
TGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAA < SRR4302534.5555022/94‑1 (MQ=10)
GCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAAC < SRR4302534.3047012/94‑1 (MQ=10)
CAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACG < SRR4302534.3637302/94‑1 (MQ=10)
CAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACG > SRR4302534.1797911/1‑94 (MQ=10)
CAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACG < SRR4302534.5311886/94‑1 (MQ=10)
AAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGG > SRR4302534.2034883/1‑94 (MQ=10)
AAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGG > SRR4302534.3202427/1‑94 (MQ=10)
AAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGC > SRR4302534.1220994/1‑94 (MQ=10)
AAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGC > SRR4302534.2228791/1‑94 (MQ=10)
AAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGC < SRR4302534.1591482/94‑1 (MQ=10)
AAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCT > SRR4302534.4128634/1‑94 (MQ=12)
AAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTC < SRR4302534.3561354/94‑1 (MQ=15)
AAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTC > SRR4302534.4603856/1‑94 (MQ=15)
AATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCA < SRR4302534.1466734/94‑1 (MQ=20)
AATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCA > SRR4302534.3027747/1‑94 (MQ=20)
AATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCA > SRR4302534.1549381/1‑94 (MQ=20)
ATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTTAG < SRR4302534.6544331/94‑1 (MQ=12)
CGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGA > SRR4302534.4271492/1‑94 (MQ=30)
CGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGA < SRR4302534.2884013/94‑1 (MQ=30)
GAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGAT < SRR4302534.5544932/94‑1 (MQ=33)
AAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATG > SRR4302534.4680169/1‑94 (MQ=35)
AAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATG < SRR4302534.4205386/94‑1 (MQ=35)
AAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATG < SRR4302534.3073994/94‑1 (MQ=35)
AAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATG > SRR4302534.6247951/1‑94 (MQ=35)
AGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGC < SRR4302534.3117924/94‑1 (MQ=38)
AGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGC > SRR4302534.6084388/1‑94 (MQ=38)
GATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCA > SRR4302534.4825214/1‑94 (MQ=40)
ATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAA > SRR4302534.5686140/1‑94 (MQ=43)
ATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAA > SRR4302534.6147315/1‑94 (MQ=43)
TAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAG < SRR4302534.1314402/94‑1 (MQ=45)
TAATGTTTTTAATAGTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAG > SRR4302534.6527618/1‑94 (MQ=43)
AATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGA < SRR4302534.4547332/94‑1 (MQ=48)
TTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAAC < SRR4302534.3209349/94‑1 (MQ=60)
TAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCA > SRR4302534.3895563/1‑94 (MQ=60)
AATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAA < SRR4302534.5744093/94‑1 (MQ=60)
TATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATT < SRR4302534.3989568/94‑1 (MQ=60)
TATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATT < SRR4302534.3457878/94‑1 (MQ=60)
TATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATT > SRR4302534.6330303/1‑94 (MQ=60)
ATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCCACGGCTCAGCGATGCAAGAAAAACCCAATTT > SRR4302534.5837214/1‑94 (MQ=60)
ATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTT < SRR4302534.1189131/94‑1 (MQ=60)
TTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTA > SRR4302534.5301501/1‑94 (MQ=60)
TTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTAT < SRR4302534.1442163/94‑1 (MQ=60)
TTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATT > SRR4302534.3973676/1‑94 (MQ=60)
TGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTC < SRR4302534.891974/94‑1 (MQ=60)
TGAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTC > SRR4302534.2380597/1‑94 (MQ=60)
GAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCA < SRR4302534.4304280/94‑1 (MQ=60)
GAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCA > SRR4302534.1127589/1‑94 (MQ=60)
GAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCA < SRR4302534.4805683/94‑1 (MQ=60)
GAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCA < SRR4302534.1371245/94‑1 (MQ=60)
GAACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCA < SRR4302534.1883363/94‑1 (MQ=60)
AACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCAC < SRR4302534.3286521/94‑1 (MQ=60)
ACAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACC > SRR4302534.5711265/1‑94 (MQ=60)
CAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCT > SRR4302534.418954/1‑94 (MQ=60)
CAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCT < SRR4302534.4056571/94‑1 (MQ=60)
CAATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCT > SRR4302534.2758055/1‑94 (MQ=60)
AATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTA < SRR4302534.1028866/94‑1 (MQ=60)
AATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTA < SRR4302534.815455/94‑1 (MQ=60)
AATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTA > SRR4302534.1287821/1‑94 (MQ=60)
AATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTA > SRR4302534.1558674/1‑94 (MQ=60)
ATATGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAA > SRR4302534.4013591/1‑94 (MQ=60)
TGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAT < SRR4302534.5218194/94‑1 (MQ=60)
TGGCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAAT < SRR4302534.4301207/94‑1 (MQ=60)
GCATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAG > SRR4302534.626915/1‑94 (MQ=60)
CATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGT > SRR4302534.270014/1‑94 (MQ=60)
ATTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTA > SRR4302534.2521553/1‑94 (MQ=60)
TTGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAG < SRR4302534.435293/94‑1 (MQ=60)
TGAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGA < SRR4302534.3830108/94‑1 (MQ=60)
GAATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAA < SRR4302534.5615677/94‑1 (MQ=60)
AATGATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAAC > SRR4302534.6491246/1‑94 (MQ=60)
ATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATC > SRR4302534.2283344/1‑94 (MQ=60)
ATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATC > SRR4302534.5655313/1‑94 (MQ=60)
ATAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATC > SRR4302534.3854516/1‑94 (MQ=60)
TAAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCT < SRR4302534.1819830/94‑1 (MQ=60)
AAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTC < SRR4302534.5687025/94‑1 (MQ=60)
AAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTC < SRR4302534.2034843/94‑1 (MQ=60)
AAGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTC < SRR4302534.6469317/94‑1 (MQ=60)
AGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCA > SRR4302534.1646633/1‑94 (MQ=60)
AGAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCA < SRR4302534.4803709/94‑1 (MQ=60)
GAGCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAA > SRR4302534.5905436/1‑94 (MQ=60)
AGCGCTTGCGCTCGAGCTACGTCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAA < SRR4302534.3491982/94‑1 (MQ=60)
GCGCTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAAT > SRR4302534.5362318/1‑94 (MQ=60)
CTTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTAC > SRR4302534.2511510/1‑94 (MQ=60)
TTGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACT < SRR4302534.5711115/94‑1 (MQ=60)
TGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTG < SRR4302534.1992298/94‑1 (MQ=60)
TGCGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTG > SRR4302534.5876811/1‑94 (MQ=60)
CGCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCT < SRR4302534.3613359/94‑1 (MQ=60)
GCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTT > SRR4302534.4918876/1‑94 (MQ=60)
GCTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTT > SRR4302534.5188162/1‑94 (MQ=60)
|
TATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTT > NC_000913/3764191‑3764375
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
