Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,911,412 |
A→G |
intergenic (‑116/+46) |
glmS ← / ← glmU |
L‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,911,412 | 0 | A | G | 100.0%
| 709.9
/ NA
| 201 | intergenic (‑116/+46) | glmS/glmU | L‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (85/116); total (85/116) |
Only 100 of 213 total aligned reads displayed.
TGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT > NC_000913/3911322‑3911501
|
gTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTa > 1:4000826/1‑93 (MQ=255)
tCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTAt > 1:5057102/1‑93 (MQ=255)
cGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATg < 2:2067895/93‑1 (MQ=255)
gTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGtt < 2:3143591/93‑1 (MQ=255)
cAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGgttatgttat > 2:223481/1‑93 (MQ=255)
cAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGgttatgttat > 1:1590611/1‑93 (MQ=255)
aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc > 2:265382/1‑93 (MQ=255)
aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc < 1:4300940/93‑1 (MQ=255)
aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc < 1:1360573/93‑1 (MQ=255)
aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGGTATGTTAtc > 2:1221904/1‑93 (MQ=255)
aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct < 2:802428/93‑1 (MQ=255)
aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct > 2:3080443/1‑93 (MQ=255)
aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct < 2:1280348/93‑1 (MQ=255)
aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct < 2:2582669/93‑1 (MQ=255)
cTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATctcc < 2:3544953/93‑1 (MQ=255)
cTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATctcc < 1:1160125/93‑1 (MQ=255)
tATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGTGGATATGTTATCTCCTCa > 1:6056353/1‑93 (MQ=255)
aTGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCAt < 2:1820845/93‑1 (MQ=255)
tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc > 1:1392269/1‑93 (MQ=255)
tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc > 2:5305439/1‑93 (MQ=255)
tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc < 1:682508/93‑1 (MQ=255)
cgCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGCTCTGTTATCTCCTCATc > 1:3532042/2‑93 (MQ=255)
gCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATcc > 2:4485653/1‑93 (MQ=255)
ccGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCa > 2:4787638/1‑93 (MQ=255)
ccGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCa > 2:5720220/1‑93 (MQ=255)
cGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAt > 1:6105286/1‑93 (MQ=255)
cGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAt > 2:4854315/1‑93 (MQ=255)
gTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtg < 2:4167397/93‑1 (MQ=255)
gTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtg < 1:1736649/93‑1 (MQ=255)
ttttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtgt < 1:5488350/93‑1 (MQ=255)
tttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAc < 2:385593/93‑1 (MQ=255)
tttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAc < 2:2279236/93‑1 (MQ=255)
ttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAcc < 2:1347018/93‑1 (MQ=255)
tCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCg < 2:850525/93‑1 (MQ=255)
cGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCgg > 2:303297/1‑93 (MQ=255)
gggCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCggg < 2:3211725/93‑1 (MQ=255)
ggCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGt < 2:4563264/93‑1 (MQ=255)
gcgcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGtt < 2:4928506/93‑1 (MQ=255)
ccccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGc > 1:468341/1‑93 (MQ=255)
ccccGAGCCTTGTAGAGAGTGGGGGTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCCTGTGACCGGGCTAGc > 1:3346943/1‑93 (MQ=255)
cccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGcc > 2:651620/1‑93 (MQ=255)
cccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGcc < 2:5687516/93‑1 (MQ=255)
ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg > 1:521221/1‑93 (MQ=255)
ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg < 2:2174319/93‑1 (MQ=255)
ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg > 1:3768030/1‑93 (MQ=255)
gAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGc > 2:1072312/1‑93 (MQ=255)
gCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCa > 1:3415657/1‑93 (MQ=255)
ccTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAg < 1:3040416/93‑1 (MQ=255)
ccTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAg > 1:5787253/1‑93 (MQ=255)
cTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGa > 1:5425156/1‑93 (MQ=255)
ttGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGaa < 2:6078882/93‑1 (MQ=255)
gTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATc < 1:1528252/93‑1 (MQ=255)
agagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCAc < 2:4281486/93‑1 (MQ=255)
gagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGTCCGTGTTAGCCGGCCAGAATCACt < 1:2994645/93‑1 (MQ=255)
gagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACt < 1:1457117/93‑1 (MQ=255)
agagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtt < 1:272416/93‑1 (MQ=255)
agagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtt < 1:2026590/93‑1 (MQ=255)
agTGGTGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtttt < 2:2749422/93‑1 (MQ=255)
gTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACttttt > 1:782524/1‑93 (MQ=255)
gTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACttttt > 1:365496/1‑93 (MQ=255)
ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCt < 2:5782381/93‑1 (MQ=255)
ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCt < 2:1085672/93‑1 (MQ=255)
gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt < 1:2393683/93‑1 (MQ=255)
gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt > 2:4968484/1‑93 (MQ=255)
gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt > 2:4709204/1‑93 (MQ=255)
ggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCttt > 1:1095243/1‑93 (MQ=255)
ggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCttt > 2:5358195/1‑93 (MQ=255)
ttttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGga < 1:3172389/93‑1 (MQ=255)
tttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac < 1:898839/93‑1 (MQ=255)
tttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac < 2:3416915/93‑1 (MQ=255)
ttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacg > 2:3504722/1‑93 (MQ=255)
tataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacga > 2:5512261/1‑93 (MQ=255)
ataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac > 1:2575756/1‑93 (MQ=255)
ataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac < 1:3209610/93‑1 (MQ=255)
gTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc < 2:1782572/93‑1 (MQ=255)
gTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc < 2:5096337/93‑1 (MQ=255)
ttACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCa > 1:4221496/1‑93 (MQ=255)
tACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAg < 2:1943767/93‑1 (MQ=255)
tACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAg > 2:5541448/1‑93 (MQ=255)
aCTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGc > 1:5866905/1‑93 (MQ=255)
cTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGcc < 2:5772007/93‑1 (MQ=255)
tGCTTGTGGGAGGGAGGTTATGTTATCTCTTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct < 1:763992/93‑1 (MQ=255)
tGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct < 1:3287683/93‑1 (MQ=255)
tGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct < 1:1015215/93‑1 (MQ=255)
gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCctt > 1:4795749/1‑93 (MQ=255)
gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCctt < 2:2820699/93‑1 (MQ=255)
gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCAATTTTTCTTTACCGGACGACGCCAGCctt > 2:378532/1‑93 (MQ=255)
cTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc < 1:874505/93‑1 (MQ=255)
cTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc < 1:4454924/93‑1 (MQ=255)
tgtgGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttctt > 1:1914246/1‑93 (MQ=255)
tgGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc < 1:6214991/93‑1 (MQ=255)
ggggagggaTGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc < 2:5131493/92‑1 (MQ=255)
gagggaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGa < 2:6139534/93‑1 (MQ=255)
gagggaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGa > 1:4415099/1‑93 (MQ=255)
agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg > 1:5321315/1‑93 (MQ=255)
agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg > 1:3123539/1‑93 (MQ=255)
agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg < 1:1952063/93‑1 (MQ=255)
agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTGCTTTCTGAg > 1:5158293/1‑93 (MQ=255)
gggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGt > 2:5277261/1‑93 (MQ=255)
gaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCt < 2:1567062/93‑1 (MQ=255)
|
TGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT > NC_000913/3911322‑3911501
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGG > NC_000913/3911319‑3911505
|
CGTTGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGG < SRR4302534.426428/94‑1 (MQ=60)
TGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTA > SRR4302534.4107932/1‑94 (MQ=60)
GTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTAT > SRR4302534.5193695/1‑94 (MQ=60)
CGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGT > SRR4302534.5335910/1‑94 (MQ=60)
CGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGT < SRR4302534.1413618/94‑1 (MQ=60)
GGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTT > SRR4302534.1096285/1‑94 (MQ=60)
GGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTT > SRR4302534.3219803/1‑94 (MQ=60)
TCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAT > SRR4302534.1632214/1‑94 (MQ=60)
CAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATC > SRR4302534.3446529/1‑94 (MQ=60)
AACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCT < SRR4302534.1396416/94‑1 (MQ=60)
AACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCT > SRR4302534.827523/1‑94 (MQ=60)
AACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCT < SRR4302534.4417518/94‑1 (MQ=60)
CCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGGTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCC > SRR4302534.1981464/1‑94 (MQ=60)
CTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCT < SRR4302534.1190568/94‑1 (MQ=60)
GTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGTGGATATGTTATCTCCTCA > SRR4302534.6221045/1‑94 (MQ=60)
TATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCAT < SRR4302534.1442123/94‑1 (MQ=60)
ATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATC > SRR4302534.1428914/1‑94 (MQ=60)
ACGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGCTCTGTTATCTCCTCATC > SRR4302534.3627051/1‑94 (MQ=60)
TGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCC < SRR4302534.699174/94‑1 (MQ=60)
CCCGTTTTTTCGGGCGCCCCGCGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTACTCATCCCA > SRR4302534.6122554/1‑94 (MQ=60)
CCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAT > SRR4302534.6271296/1‑94 (MQ=60)
GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGT < SRR4302534.1781749/94‑1 (MQ=60)
TTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTG < SRR4302534.5636369/94‑1 (MQ=60)
TTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAC > SRR4302534.4695079/1‑94 (MQ=60)
TTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACC < SRR4302534.651714/94‑1 (MQ=60)
CGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGG < SRR4302534.2057817/94‑1 (MQ=60)
GCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTA < SRR4302534.4399225/94‑1 (MQ=60)
GCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGC > SRR4302534.480147/1‑94 (MQ=60)
GCCCCGAGCCTTGTAGAGAGTGGGGGTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCCTGTGACCGGGCTAGC > SRR4302534.3436542/1‑94 (MQ=60)
CCCCGATCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCC < SRR4302534.898956/94‑1 (MQ=60)
CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCG > SRR4302534.3869190/1‑94 (MQ=60)
CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCG < SRR4302534.3628024/94‑1 (MQ=60)
CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCG < SRR4302534.5913974/94‑1 (MQ=60)
CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCG > SRR4302534.534181/1‑94 (MQ=60)
CGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGC > SRR4302534.3340648/1‑94 (MQ=60)
CGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGC > SRR4302534.5907111/1‑94 (MQ=60)
GAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCC > SRR4302534.4542437/1‑94 (MQ=60)
GAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCC > SRR4302534.5488310/1‑94 (MQ=60)
AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCA > SRR4302534.3507425/1‑94 (MQ=60)
AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCA > SRR4302534.3103943/1‑94 (MQ=60)
AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGAAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCA < SRR4302534.2226917/94‑1 (MQ=60)
GCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAG > SRR4302534.5944244/1‑94 (MQ=60)
CCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGA > SRR4302534.5571157/1‑94 (MQ=60)
CCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGA < SRR4302534.3120159/94‑1 (MQ=60)
CTTGTAGAGAGTGGGGGTATTTTTATAGTTACTGCTTGTGGGAGGGAGGGTATGTTATCTCCTCATCCCATGTGACCGGGGTAGGCGGGCAGAA > SRR4302534.3405514/1‑94 (MQ=60)
TTGTAGAGAGTGGGGTTTTTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAAT > SRR4302534.840281/1‑94 (MQ=60)
GTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCA < SRR4302534.1549387/94‑1 (MQ=60)
GTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCA < SRR4302534.1568362/94‑1 (MQ=60)
GAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGTCCGTGTTAGCCGGCCAGAATCACTT < SRR4302534.3072944/94‑1 (MQ=60)
GAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTT < SRR4302534.1495444/94‑1 (MQ=60)
AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTT < SRR4302534.187017/94‑1 (MQ=60)
AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTT < SRR4302534.279474/94‑1 (MQ=60)
AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTT < SRR4302534.2079604/94‑1 (MQ=60)
AGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTT > SRR4302534.802042/1‑94 (MQ=60)
AGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTT < SRR4302534.3699078/94‑1 (MQ=60)
AGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTT > SRR4302534.374825/1‑94 (MQ=60)
TGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCT < SRR4302534.4822564/94‑1 (MQ=60)
GGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTT < SRR4302534.2787247/94‑1 (MQ=60)
GGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTT > SRR4302534.1123730/1‑94 (MQ=60)
GGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTT > SRR4302534.789914/1‑94 (MQ=60)
GGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTT < SRR4302534.2457285/94‑1 (MQ=60)
GTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAC < SRR4302534.5000106/94‑1 (MQ=60)
ATTTTTATAGTTACTGCTTGTGGGAGGGTGGTTATGGTATCTCTTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGG > SRR4302534.1411641/1‑94 (MQ=60)
ATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGG > SRR4302534.6286426/1‑94 (MQ=60)
TTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGA < SRR4302534.3104973/94‑1 (MQ=60)
TTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGAC > SRR4302534.2492393/1‑94 (MQ=60)
TTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGAC < SRR4302534.3256109/94‑1 (MQ=60)
TTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACG < SRR4302534.921608/94‑1 (MQ=60)
TATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC < SRR4302534.969309/94‑1 (MQ=60)
TATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC > SRR4302534.2643984/1‑94 (MQ=60)
ATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG < SRR4302534.3934858/94‑1 (MQ=60)
ATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG < SRR4302534.3294780/94‑1 (MQ=60)
ATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG < SRR4302534.1757157/94‑1 (MQ=60)
ATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG < SRR4302534.3156288/94‑1 (MQ=60)
ATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG < SRR4302534.1164388/94‑1 (MQ=60)
TAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGC > SRR4302534.3769342/1‑94 (MQ=60)
GTTAGTGCTTGTCGGCGGGAGGTTATGTTATCTCCTCATTCCATGTGACCGGATTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA < SRR4302534.1337070/94‑1 (MQ=60)
GTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA > SRR4302534.4335298/1‑94 (MQ=60)
TTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAG < SRR4302534.1597464/94‑1 (MQ=60)
TTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAG > SRR4302534.5592233/1‑94 (MQ=60)
TACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGC > SRR4302534.6026203/1‑94 (MQ=60)
ACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCC < SRR4302534.5959319/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCTTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT < SRR4302534.782958/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT < SRR4302534.1041348/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT < SRR4302534.3269024/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT < SRR4302534.5407678/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT < SRR4302534.3375347/94‑1 (MQ=60)
TGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT > SRR4302534.4925968/1‑94 (MQ=60)
GCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTC < SRR4302534.4183868/94‑1 (MQ=60)
CTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT > SRR4302534.5267693/1‑94 (MQ=60)
CTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT < SRR4302534.896621/94‑1 (MQ=60)
CTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT < SRR4302534.4575338/94‑1 (MQ=60)
TTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTT > SRR4302534.1964221/1‑94 (MQ=60)
TTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTT < SRR4302534.6248618/94‑1 (MQ=60)
TGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCT < SRR4302534.6383858/94‑1 (MQ=60)
TGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCT < SRR4302534.2811656/94‑1 (MQ=60)
GGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGA > SRR4302534.4534278/1‑94 (MQ=60)
GGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGA > SRR4302534.3544883/1‑94 (MQ=60)
GAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG > SRR4302534.4496999/1‑94 (MQ=60)
GAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG > SRR4302534.3205652/1‑94 (MQ=60)
GAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG > SRR4302534.5464836/1‑94 (MQ=60)
GAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTGCTTTCTGAG > SRR4302534.5297376/1‑94 (MQ=60)
GAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGACTTCTTTCTGAG > SRR4302534.1774098/1‑94 (MQ=60)
AGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGT < SRR4302534.2003149/94‑1 (MQ=60)
GGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT < SRR4302534.703339/94‑1 (MQ=60)
GAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTG > SRR4302534.1770105/1‑94 (MQ=60)
GAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTG < SRR4302534.4727058/94‑1 (MQ=60)
GAGGTTATGTTATCTCCTCATCCCATGTGACCGGGGTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTG > SRR4302534.1358730/1‑94 (MQ=60)
AGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGC > SRR4302534.272889/1‑94 (MQ=60)
GGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCG < SRR4302534.442462/94‑1 (MQ=60)
GGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCG < SRR4302534.1605732/94‑1 (MQ=60)
GGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCG < SRR4302534.679603/94‑1 (MQ=60)
GGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCG < SRR4302534.2327469/94‑1 (MQ=60)
GTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGG > SRR4302534.3735234/1‑94 (MQ=60)
GTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGG > SRR4302534.2430636/1‑94 (MQ=60)
GTTATGTTATCTCCTCATCCCATGTGACCGGGGTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGG > SRR4302534.4135136/1‑94 (MQ=60)
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CGTTGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGG > NC_000913/3911319‑3911505
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
