Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,017,086 |
T→C |
H215H (CAT→CAC) |
ubiE → |
UbiE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,017,086 | 0 | T | C | 99.6%
| 881.6
/ ‑4.6
| 252 | H215H (CAT→CAC) | ubiE | UbiE |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (136/114); total (136/116) |
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
Only 100 of 271 total aligned reads displayed.
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCT > NC_000913/4016996‑4017175
|
aTACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAccc > 1:1247174/1‑93 (MQ=255)
aTACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAccc < 2:725343/93‑1 (MQ=255)
aTACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAccc < 1:1713313/93‑1 (MQ=255)
tACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAcccc > 1:1313667/1‑93 (MQ=255)
tACTCCTTCCATGTGCTGCCGCGTATTGGCTCACCGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAcccc > 2:2075929/1‑93 (MQ=255)
aCTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCg < 1:2513272/93‑1 (MQ=255)
ccTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATc < 2:2026750/93‑1 (MQ=255)
cTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCa > 2:5587221/1‑93 (MQ=255)
ttCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAg < 1:3136805/93‑1 (MQ=255)
ttCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAg < 2:855843/93‑1 (MQ=255)
tCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAgg > 1:3743480/1‑93 (MQ=255)
ccATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGa < 2:2483056/93‑1 (MQ=255)
ccATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGa > 1:2328422/1‑93 (MQ=255)
cATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGAt > 2:5228046/1‑93 (MQ=255)
cATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGAt > 1:329964/1‑93 (MQ=255)
aTGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATa > 2:4302252/1‑93 (MQ=255)
aTGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATa > 1:6088355/1‑93 (MQ=255)
aTGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATa > 1:4075711/1‑93 (MQ=255)
tgtgCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAc > 1:921185/1‑93 (MQ=255)
tgtgCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAc < 1:677538/93‑1 (MQ=255)
gtgCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAcc < 1:5113420/93‑1 (MQ=255)
tgctgcCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAccc < 1:3232014/93‑1 (MQ=255)
gctgcCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCt > 1:5665488/1‑93 (MQ=255)
tgcCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGa < 2:4027981/93‑1 (MQ=255)
gcCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGaa > 2:4384008/1‑93 (MQ=255)
gcCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGaa > 1:1059633/1‑93 (MQ=255)
ccGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGaaa < 2:598727/93‑1 (MQ=255)
ccGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGaaa < 1:494531/93‑1 (MQ=255)
cgcgTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAg < 2:6330833/93‑1 (MQ=255)
gcgTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGc > 2:5187211/1‑93 (MQ=255)
cgTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGcc > 2:4109179/1‑93 (MQ=255)
gTATTGGCTCACTGGTCGCGAACGACGCCGTCAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCa > 1:454407/1‑93 (MQ=255)
tATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGCAAGccct > 1:158273/1‑91 (MQ=255)
tATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCat > 1:1382352/1‑93 (MQ=255)
tATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCat > 1:5594499/1‑93 (MQ=255)
aTTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCatg < 1:154591/93‑1 (MQ=255)
tGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCatgat > 2:1725933/1‑93 (MQ=255)
ggCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCatgatg > 1:6383613/1‑93 (MQ=255)
cTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCa > 2:1820571/1‑93 (MQ=255)
cTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCa < 2:3706357/93‑1 (MQ=255)
aCTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGa < 2:4695064/93‑1 (MQ=255)
cTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGAt > 2:2901132/1‑93 (MQ=255)
cTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGAt < 2:3884873/93‑1 (MQ=255)
tGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATg > 2:4370950/1‑93 (MQ=255)
ggTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGc > 1:4039565/1‑93 (MQ=255)
ggTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGc > 1:5945161/1‑93 (MQ=255)
gTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGcc < 2:6205771/93‑1 (MQ=255)
tCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCg < 2:2339938/93‑1 (MQ=255)
gcgcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCg < 2:3282246/92‑1 (MQ=255)
cgcgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCgg < 1:6042582/93‑1 (MQ=255)
cgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCGTGATGCAGGATGCCGGAt < 1:5730617/93‑1 (MQ=255)
cgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGAt > 1:2804996/1‑93 (MQ=255)
cgAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGAt < 2:3048918/93‑1 (MQ=255)
aaCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTc > 1:2673200/1‑93 (MQ=255)
aaCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTc < 1:3481597/93‑1 (MQ=255)
aaCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTc > 2:2242969/1‑93 (MQ=255)
acgacgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCg < 1:473547/93‑1 (MQ=255)
acgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATATCCTGAAAGCCATGATGCAGGATGCCGGATTCGaaa > 2:1514190/1‑93 (MQ=255)
acgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGaaa > 2:3237465/1‑93 (MQ=255)
acgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGaaa > 1:1967108/1‑93 (MQ=255)
acgCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGaaa > 1:5396626/1‑93 (MQ=255)
cGACATCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAgtgt < 1:2087670/93‑1 (MQ=255)
aCAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCg < 2:5705852/93‑1 (MQ=255)
aCAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCACGATACCCTGAAAGCCAAGATCCAGCAGGCCGGATTCGAAAGTGCCg > 1:5385734/1‑93 (MQ=255)
aGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGac < 1:1914193/93‑1 (MQ=255)
tcTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGact < 2:1442118/92‑1 (MQ=255)
gCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGact > 1:728398/1‑93 (MQ=255)
gCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGact > 2:3738673/1‑93 (MQ=255)
gCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCCATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGact < 2:2713239/93‑1 (MQ=255)
tACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGactac < 2:4434543/93‑1 (MQ=255)
tACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGactac > 2:3606077/1‑93 (MQ=255)
tACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGactac < 1:5777034/93‑1 (MQ=255)
ttATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACaa > 1:466745/1‑93 (MQ=255)
aTCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATc < 2:639001/93‑1 (MQ=255)
aTCTGGCAGAATCCATCCGTATGCAACCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATc < 2:6133873/93‑1 (MQ=255)
tGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGa > 1:5970167/1‑93 (MQ=255)
ggCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACACTCTGAc > 1:3933648/1‑93 (MQ=255)
gCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACg < 2:4778859/93‑1 (MQ=255)
aGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGc > 2:129908/1‑93 (MQ=255)
aGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGc > 2:668808/1‑93 (MQ=255)
gAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCa > 2:4174699/1‑93 (MQ=255)
gAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCa > 1:1598608/1‑93 (MQ=255)
gAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCa > 1:648302/1‑93 (MQ=255)
gAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCa > 1:5553668/1‑93 (MQ=255)
gAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCa < 2:5061370/93‑1 (MQ=255)
aaTCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAg < 1:5007674/93‑1 (MQ=255)
atccatccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAgg < 1:1159813/93‑1 (MQ=255)
atccatccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAgg < 2:1560221/93‑1 (MQ=255)
tccatccGTATGCACCGCGATCAGGATAGCTTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAgtg < 1:3077610/93‑3 (MQ=255)
tccatccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAggg < 2:5259420/93‑1 (MQ=255)
tccatccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAggg > 1:4841690/1‑93 (MQ=255)
catccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGt < 2:1681422/93‑1 (MQ=255)
catccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGt < 2:6030993/93‑1 (MQ=255)
atccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGtt > 2:5807968/1‑93 (MQ=255)
atccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGtt < 1:2213998/93‑1 (MQ=255)
tccGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTtg < 1:2920328/93‑1 (MQ=255)
gTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGCTTCGAAAGTGTCGACTACTACAATCTCACGGCAGGGGTTGTgg > 1:4140566/1‑93 (MQ=255)
gTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTgg < 2:3511641/93‑1 (MQ=255)
tATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGgc > 1:1786894/1‑93 (MQ=255)
gCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCt > 1:2962757/1‑93 (MQ=255)
|
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCT > NC_000913/4016996‑4017175
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGC > NC_000913/4016993‑4017177
|
TGCATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCAC > SRR4302534.5056181/1‑94 (MQ=60)
CATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCC > SRR4302534.3187795/1‑94 (MQ=60)
CATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCC > SRR4302534.1280037/1‑94 (MQ=60)
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCC > SRR4302534.3481994/1‑94 (MQ=60)
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCC > SRR4302534.1348303/1‑94 (MQ=60)
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCC < SRR4302534.6406570/94‑1 (MQ=60)
ATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCC < SRR4302534.1757821/94‑1 (MQ=60)
TACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCG < SRR4302534.2216425/94‑1 (MQ=60)
ACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGA < SRR4302534.1624389/94‑1 (MQ=60)
ACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGA < SRR4302534.2580001/94‑1 (MQ=60)
TCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATC > SRR4302534.737305/1‑94 (MQ=60)
TCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGAGAACGACGCCGACAGATACCGGTTTCTGGTAGAATCTATCCGTATGCACCCCGATC > SRR4302534.284590/1‑94 (MQ=60)
CTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAG > SRR4302534.123626/1‑94 (MQ=60)
CTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAG > SRR4302534.1291752/1‑94 (MQ=60)
TTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGG < SRR4302534.3219297/94‑1 (MQ=60)
TTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGG > SRR4302534.3844053/1‑94 (MQ=60)
TCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGA > SRR4302534.6200697/1‑94 (MQ=60)
TCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGA > SRR4302534.2390204/1‑94 (MQ=60)
CCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGAT > SRR4302534.338441/1‑94 (MQ=60)
CCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGAT > SRR4302534.2722649/1‑94 (MQ=60)
CATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATA > SRR4302534.6253919/1‑94 (MQ=60)
CATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATA > SRR4302534.4185094/1‑94 (MQ=60)
CATGTGCTCCCGCGTATTCGCTCACTGGTCGCGACCGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATA < SRR4302534.5750646/94‑1 (MQ=60)
ATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAC > SRR4302534.944645/1‑94 (MQ=60)
TGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACC < SRR4302534.694078/94‑1 (MQ=60)
GTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCC < SRR4302534.5251417/94‑1 (MQ=60)
TGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCT < SRR4302534.3317923/94‑1 (MQ=60)
TGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCT > SRR4302534.5818867/1‑94 (MQ=60)
TGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCT < SRR4302534.2719489/94‑1 (MQ=60)
TGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAA > SRR4302534.1087094/1‑94 (MQ=60)
CCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAG < SRR4302534.506870/94‑1 (MQ=60)
CGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGC > SRR4302534.1822875/1‑94 (MQ=60)
CGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGC > SRR4302534.5288687/1‑94 (MQ=60)
CGTATTGGCTCACTGGTCGCGAACGACGCCGTCAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCA > SRR4302534.465908/1‑94 (MQ=60)
CGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCA > SRR4302534.1372544/1‑94 (MQ=60)
GTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGCAAGCCCT > SRR4302534.162413/1‑94 (MQ=60)
GTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCAT > SRR4302534.1121224/1‑94 (MQ=60)
GTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCAT > SRR4302534.5745762/1‑94 (MQ=60)
GTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCAT > SRR4302534.1418743/1‑94 (MQ=60)
ATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGA < SRR4302534.158623/94‑1 (MQ=60)
ATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGA > SRR4302534.1527266/1‑94 (MQ=60)
ATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGA > SRR4302534.1938648/1‑94 (MQ=60)
TTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGAT < SRR4302534.2802972/94‑1 (MQ=60)
TGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATG < SRR4302534.5165804/94‑1 (MQ=60)
TGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATG > SRR4302534.3115468/1‑94 (MQ=60)
TGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATG > SRR4302534.6556055/1‑94 (MQ=60)
CTCGCTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAG < SRR4302534.3383362/94‑1 (MQ=60)
CTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAG > SRR4302534.6212236/1‑94 (MQ=60)
CTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAG < SRR4302534.5839572/94‑1 (MQ=60)
CTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAG < SRR4302534.3243239/94‑1 (MQ=60)
CTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAG > SRR4302534.3007638/1‑94 (MQ=60)
CTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATAACCTGAAAGCCATGATGCAG > SRR4302534.2568390/1‑94 (MQ=60)
CTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATG > SRR4302534.2983903/1‑94 (MQ=60)
TGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGC < SRR4302534.1688282/94‑1 (MQ=60)
TGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGC > SRR4302534.923894/1‑94 (MQ=60)
TGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGC > SRR4302534.4147881/1‑94 (MQ=60)
TGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGC > SRR4302534.6106583/1‑94 (MQ=60)
CGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGA > SRR4302534.1303510/1‑94 (MQ=60)
CGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGA < SRR4302534.6206842/94‑1 (MQ=60)
GCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGAT < SRR4302534.572913/94‑1 (MQ=60)
GCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGAT > SRR4302534.2878773/1‑94 (MQ=60)
CGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCGTGATGCAGGATGCCGGATT < SRR4302534.5885903/94‑1 (MQ=60)
CGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATT < SRR4302534.6015935/94‑1 (MQ=60)
CGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATT < SRR4302534.1484541/94‑1 (MQ=60)
CGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATT > SRR4302534.6074288/1‑94 (MQ=60)
GAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTC < SRR4302534.5783167/94‑1 (MQ=60)
GAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTC > SRR4302534.3426615/1‑94 (MQ=60)
GAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTC > SRR4302534.2743854/1‑94 (MQ=60)
AACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCG < SRR4302534.4240054/94‑1 (MQ=60)
AACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCG > SRR4302534.5702985/1‑94 (MQ=60)
AACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCG < SRR4302534.3575182/94‑1 (MQ=60)
AACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCG < SRR4302534.6113476/94‑1 (MQ=60)
ACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGA < SRR4302534.485460/94‑1 (MQ=60)
CGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAA < SRR4302534.1972157/94‑1 (MQ=60)
GACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAA > SRR4302534.2018601/1‑94 (MQ=60)
GACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAA > SRR4302534.2845993/1‑94 (MQ=60)
GACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAA > SRR4302534.5541936/1‑94 (MQ=60)
CGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGT < SRR4302534.5929521/94‑1 (MQ=60)
CGACATCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTC < SRR4302534.2142384/94‑1 (MQ=60)
CGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTC < SRR4302534.4216777/94‑1 (MQ=60)
CGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCACGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGAGTC > SRR4302534.672229/1‑94 (MQ=60)
GACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCG > SRR4302534.5920769/1‑94 (MQ=60)
GACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCG < SRR4302534.2272887/94‑1 (MQ=60)
GACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCACGATACCCTGAAAGCCAAGATCCAGCAGGCCGGATTCGAAAGTGCCG > SRR4302534.5530799/1‑94 (MQ=60)
ACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGGTGCCGGgtttgaaaaaggtga > SRR4302534.5476737/1‑79 (MQ=60)
CAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGAC > SRR4302534.4765717/1‑94 (MQ=60)
CAGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGAC > SRR4302534.1277049/1‑94 (MQ=60)
AGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACT > SRR4302534.746385/1‑94 (MQ=60)
AGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACT < SRR4302534.1964163/94‑1 (MQ=60)
AGCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACT > SRR4302534.336481/1‑94 (MQ=60)
GCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTA < SRR4302534.570815/94‑1 (MQ=60)
GCTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTA > SRR4302534.4951329/1‑94 (MQ=60)
CTACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTAC > SRR4302534.3294768/1‑94 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT > SRR4302534.650912/1‑94 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT < SRR4302534.5933742/94‑1 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT < SRR4302534.497830/94‑1 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT > SRR4302534.4268715/1‑94 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT < SRR4302534.4182927/94‑1 (MQ=60)
TACCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACT > SRR4302534.388753/1‑94 (MQ=60)
CCGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTAC > SRR4302534.404206/1‑94 (MQ=60)
CGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACA > SRR4302534.3030603/1‑94 (MQ=60)
CGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACA > SRR4302534.4259326/1‑94 (MQ=60)
CGTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAATGTCGACTACTACA > SRR4302534.3607304/1‑94 (MQ=60)
GTTATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAA > SRR4302534.478521/1‑94 (MQ=60)
TATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATC < SRR4302534.5165059/94‑1 (MQ=60)
ATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCT < SRR4302534.5307651/94‑1 (MQ=60)
ATCTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCT < SRR4302534.4055190/94‑1 (MQ=60)
CTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGA > SRR4302534.6132316/1‑94 (MQ=60)
CTGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGA > SRR4302534.1621423/1‑94 (MQ=60)
TGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACACTCTGAC > SRR4302534.4039009/1‑94 (MQ=60)
TGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGAC > SRR4302534.5043397/1‑94 (MQ=60)
TGGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGAC < SRR4302534.3049050/94‑1 (MQ=60)
GGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACG < SRR4302534.5533531/94‑1 (MQ=60)
GGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACG > SRR4302534.6240893/1‑94 (MQ=60)
GGCAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACG < SRR4302534.2061539/94‑1 (MQ=60)
CAGAATCCATCCGTATGCACCCCGATCAGGGTACCCTGAAAGCCATGATGCAGGATGCCGGATGCGAAAGTGTCGACTACTACAATCTGACGTC > SRR4302534.2562290/1‑94 (MQ=60)
CAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGC > SRR4302534.1901311/1‑94 (MQ=60)
CAGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGC > SRR4302534.1617919/1‑94 (MQ=60)
AGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCA > SRR4302534.664023/1‑94 (MQ=60)
AGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCA > SRR4302534.1640377/1‑94 (MQ=60)
AGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCA > SRR4302534.5703591/1‑94 (MQ=60)
AGAATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCA > SRR4302534.6200857/1‑94 (MQ=60)
AATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGG < SRR4302534.5143029/94‑1 (MQ=60)
AATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGG < SRR4302534.4755782/94‑1 (MQ=60)
AATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGG < SRR4302534.2087684/94‑1 (MQ=60)
AATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGG < SRR4302534.4038375/94‑1 (MQ=60)
ATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGG < SRR4302534.1190245/94‑1 (MQ=60)
ATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGG < SRR4302534.1665630/94‑1 (MQ=60)
ATCCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGG > SRR4302534.4973039/1‑94 (MQ=60)
TCCATCCGTATGCACCGCGATCAGGATAGCTTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGTGG < SRR4302534.3158459/94‑1 (MQ=60)
CCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGT > SRR4302534.5684002/1‑94 (MQ=60)
CCATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGT > SRR4302534.4912705/1‑94 (MQ=60)
ATCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTG < SRR4302534.2272639/94‑1 (MQ=60)
TCCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGT < SRR4302534.2996961/94‑1 (MQ=60)
CCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTG < SRR4302534.6573080/94‑1 (MQ=60)
CCGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGGTGTG > SRR4302534.69417/1‑94 (MQ=60)
CGTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGCTTCGAAAGTGTCGACTACTACAATCTCACGGCAGGGGTTGTGG > SRR4302534.4252306/1‑94 (MQ=60)
CGTATGCACCCCGATCACGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGG > SRR4302534.2221503/1‑94 (MQ=60)
GTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGC > SRR4302534.1833285/1‑94 (MQ=60)
GTATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGC < SRR4302534.4822754/94‑1 (MQ=60)
TATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCG < SRR4302534.731722/94‑1 (MQ=60)
TATGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCG < SRR4302534.1775341/94‑1 (MQ=60)
TGCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCT > SRR4302534.3040358/1‑94 (MQ=60)
GCACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTG < SRR4302534.5107446/94‑1 (MQ=60)
CACCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGC < SRR4302534.5877517/94‑1 (MQ=60)
|
TGCATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGC > NC_000913/4016993‑4017177
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
