Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,253,010 |
G→A |
R346C (CGT→TGT) |
plsB ← |
glycerol‑3‑phosphate acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,253,010 | 0 | G | A | 100.0%
| 916.7
/ NA
| 233 | R346C (CGT→TGT) | plsB | glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (140/93); total (140/93) |
Only 100 of 247 total aligned reads displayed.
GGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACGGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAG > NC_000913/4252920‑4253099
|
cTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGAcagcgg > 2:6051265/1‑93 (MQ=255)
tGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGa < 1:131705/93‑1 (MQ=255)
tGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGa > 1:1448366/1‑93 (MQ=255)
cAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAAt > 1:3052038/1‑93 (MQ=255)
cAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAAt < 2:5780873/93‑1 (MQ=255)
cAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAAt < 2:2188157/93‑1 (MQ=255)
aGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATc < 2:5810261/93‑1 (MQ=255)
ttCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCgg > 2:5477133/1‑93 (MQ=255)
tCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGc > 1:2816686/1‑93 (MQ=255)
tCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGc < 1:4005932/93‑1 (MQ=255)
gCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGccc > 2:5600796/1‑93 (MQ=255)
gCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGccc > 2:4391061/1‑93 (MQ=255)
gCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGccc < 2:2980704/93‑1 (MQ=255)
gagaTACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGc < 1:1719184/93‑1 (MQ=255)
agaTACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCa < 1:5817347/93‑1 (MQ=255)
gaTACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAg > 1:3779085/1‑93 (MQ=255)
gaTACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAg > 1:5173405/1‑93 (MQ=255)
tACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGc < 2:1428959/93‑1 (MQ=255)
aCTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGcc < 1:6033962/93‑1 (MQ=255)
cTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCa > 2:310334/1‑93 (MQ=255)
cTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCa < 1:2429125/93‑1 (MQ=255)
cccGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGa > 2:3328144/1‑93 (MQ=255)
ccGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGaa > 2:2598373/1‑93 (MQ=255)
cGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGaaa > 2:1202500/1‑93 (MQ=255)
ggAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAAt > 2:2831922/1‑93 (MQ=255)
gAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAAtt < 1:2222070/93‑1 (MQ=255)
aaaaCGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTc < 2:498098/93‑1 (MQ=255)
aaaCGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCa < 1:288856/93‑1 (MQ=255)
aaaCGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCa < 2:5542596/93‑1 (MQ=255)
aaCGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAg > 2:3291679/1‑93 (MQ=255)
aaCGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAg > 2:2238669/1‑93 (MQ=255)
cGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGt < 2:3956120/93‑1 (MQ=255)
cGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGt > 1:5698153/1‑93 (MQ=255)
cGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGt > 2:5209083/1‑93 (MQ=255)
cGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGt > 2:340496/1‑93 (MQ=255)
gTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTg < 2:5307497/93‑1 (MQ=255)
gTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTg < 1:366564/93‑1 (MQ=255)
gTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTg < 2:842506/93‑1 (MQ=255)
ggAATAAAGTTTATTGCCTTTAAACGTCCGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAt > 1:4768419/1‑93 (MQ=255)
ggAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAt < 1:645181/93‑1 (MQ=255)
ggAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAt < 1:1159974/93‑1 (MQ=255)
gAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAGAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATc < 2:1776902/93‑1 (MQ=255)
gAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATc > 1:3125976/1‑93 (MQ=255)
aaTAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATcc < 2:2450611/93‑1 (MQ=255)
aTAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATccc < 2:5953931/93‑1 (MQ=255)
aTAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAAGTCAGGTTCATccc > 1:5388167/1‑93 (MQ=255)
aaaGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcgg > 1:4148834/1‑93 (MQ=255)
aaaGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcgg < 1:1016035/93‑1 (MQ=255)
aaaGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcgg > 2:2686562/1‑93 (MQ=255)
aaaGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATAGGCCCGGCAGGCCAGAAATTCAGGTTGCTCCcgg > 1:232376/1‑93 (MQ=255)
aGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcggcg > 2:4220971/1‑93 (MQ=255)
aGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcggcg > 1:3851161/1‑93 (MQ=255)
aGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCcggcg < 1:3581401/93‑1 (MQ=255)
tGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGatat < 2:3367304/93‑1 (MQ=255)
gCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATg > 2:5055967/1‑93 (MQ=255)
gCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATg > 2:3123993/1‑93 (MQ=255)
cTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATgcg > 2:4802087/1‑93 (MQ=255)
cTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATgcg > 1:3659509/1‑93 (MQ=255)
tttAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGTGGATATgcgg > 1:1655545/1‑93 (MQ=255)
tttAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATgcgg > 2:17073/1‑93 (MQ=255)
aaaCGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGcggcgg < 2:780807/93‑1 (MQ=255)
aaaCGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGGTGATCCCGGCGGCGATATGcggcgg > 1:741263/1‑93 (MQ=255)
aaCGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCggcggc > 1:200048/1‑93 (MQ=255)
aaCGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCggcggc < 1:5930446/93‑1 (MQ=255)
aCGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCa > 1:6214867/1‑93 (MQ=255)
cGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCAc < 1:4603353/93‑1 (MQ=255)
gTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCAcc < 2:1132879/93‑1 (MQ=255)
gTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCAcc > 1:5041709/1‑93 (MQ=255)
gTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCAcc > 1:6377355/1‑93 (MQ=255)
tACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCa > 1:2625917/1‑93 (MQ=255)
tACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCa < 2:1963514/93‑1 (MQ=255)
aCGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGCTGATCCCGGCGGCGATATGCGGCGGCACCAg > 2:5803783/1‑93 (MQ=255)
cGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATAAGCGGCGGCACCAGc > 1:1560869/1‑93 (MQ=255)
ggCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGcc > 2:1018929/1‑93 (MQ=255)
gCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGccc > 2:618067/1‑93 (MQ=255)
cGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCGCCAGcccc < 1:1987660/93‑1 (MQ=255)
cGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGcccc < 2:3564644/93‑1 (MQ=255)
cGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGcccc > 1:5736771/1‑93 (MQ=255)
cGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGcccc < 2:4611645/93‑1 (MQ=255)
gAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCt < 2:684899/93‑1 (MQ=255)
gAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCt < 2:4171075/93‑1 (MQ=255)
gAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCt > 1:350486/1‑93 (MQ=255)
gAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCt < 1:4405501/93‑1 (MQ=255)
aaTAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTg > 2:1472042/1‑93 (MQ=255)
aaTAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTg > 1:951091/1‑93 (MQ=255)
aaaGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTg < 2:2793436/93‑1 (MQ=255)
gAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATa > 2:2386235/1‑93 (MQ=255)
aaCGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATAc > 2:4842599/1‑93 (MQ=255)
aCGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACa > 1:1775154/1‑93 (MQ=255)
aCGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACa > 1:5487209/1‑93 (MQ=255)
aCGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACa > 1:2874172/1‑93 (MQ=255)
ccccccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGc < 2:3782909/92‑1 (MQ=255)
cccccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCa > 2:1864312/1‑93 (MQ=255)
ccccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCAc > 2:1167952/1‑93 (MQ=255)
ccccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCAc < 2:4936316/93‑1 (MQ=255)
cccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACg < 1:2768905/93‑1 (MQ=255)
cccAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACg > 1:6304179/1‑93 (MQ=255)
cAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTa > 1:2227557/1‑93 (MQ=255)
cAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTa > 1:1891629/1‑93 (MQ=255)
cAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTa > 2:3987670/1‑93 (MQ=255)
|
GGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACGGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAG > NC_000913/4252920‑4253099
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACGGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAAAG > NC_000913/4252919‑4253103
|
CGGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGC > SRR4302534.1975312/1‑94 (MQ=60)
CGGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGC < SRR4302534.1236414/94‑1 (MQ=60)
CGGCTGAACAGTTCGCCCAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGC > SRR4302534.5501596/1‑94 (MQ=60)
GCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGG > SRR4302534.1740380/1‑94 (MQ=60)
GCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGG > SRR4302534.827974/1‑94 (MQ=60)
CTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGTGGA > SRR4302534.2887122/1‑94 (MQ=60)
CTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGA > SRR4302534.1486485/1‑94 (MQ=60)
CTAAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGA < SRR4302534.3407211/94‑1 (MQ=60)
TGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAA > SRR4302534.4799593/1‑94 (MQ=60)
TGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAA > SRR4302534.2913339/1‑94 (MQ=60)
TGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAA < SRR4302534.135184/94‑1 (MQ=60)
TGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAA > SRR4302534.2378416/1‑94 (MQ=60)
ACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAAT > SRR4302534.3132107/1‑94 (MQ=60)
CAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATC < SRR4302534.2405204/94‑1 (MQ=60)
CAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATC < SRR4302534.744018/94‑1 (MQ=60)
TTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGC > SRR4302534.2890770/1‑94 (MQ=60)
TCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCC < SRR4302534.4113188/94‑1 (MQ=60)
GCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCG < SRR4302534.1779580/94‑1 (MQ=60)
GCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCG < SRR4302534.2941534/94‑1 (MQ=60)
GCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCG < SRR4302534.2040174/94‑1 (MQ=60)
GAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCA < SRR4302534.1763840/94‑1 (MQ=60)
GAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCA > SRR4302534.5237244/1‑94 (MQ=60)
AGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAG > SRR4302534.3880544/1‑94 (MQ=60)
AGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAG > SRR4302534.5312832/1‑94 (MQ=60)
AGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAG > SRR4302534.1539093/1‑94 (MQ=60)
AGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAG < SRR4302534.5975241/94‑1 (MQ=60)
ATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGC < SRR4302534.408574/94‑1 (MQ=60)
ACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCA < SRR4302534.3829310/94‑1 (MQ=60)
ACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCA < SRR4302534.6197940/94‑1 (MQ=60)
CTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAG > SRR4302534.3957917/1‑94 (MQ=60)
CTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAG < SRR4302534.2493707/94‑1 (MQ=60)
cccggaatccggttacatatactttactccccttaatcatacatctAATAAAGAACCCCCCCAGACTGCGTAAAATCGGCCCGGCAGGCCAGAA < SRR4302534.5493304/48‑1 (MQ=60)
CCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAATTCGGCCCGGCAGGCCAGAAA < SRR4302534.6455569/94‑1 (MQ=60)
CGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAAT < SRR4302534.2598031/94‑1 (MQ=60)
GAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTC < SRR4302534.2280919/94‑1 (MQ=60)
AAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCA > SRR4302534.2968726/1‑94 (MQ=60)
AAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAG < SRR4302534.296326/94‑1 (MQ=60)
AAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAG < SRR4302534.6311083/94‑1 (MQ=60)
AAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAG > SRR4302534.1120355/1‑94 (MQ=60)
AACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGG > SRR4302534.3139571/1‑94 (MQ=60)
ACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGT < SRR4302534.1803147/94‑1 (MQ=60)
ACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGT > SRR4302534.5852508/1‑94 (MQ=60)
GTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGA < SRR4302534.375921/94‑1 (MQ=60)
GTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGA > SRR4302534.5891539/1‑94 (MQ=60)
TGGAATAAAGTTTATTGCCTTTAAACGTCCGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAT > SRR4302534.4897884/1‑94 (MQ=60)
TGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAT > SRR4302534.5715458/1‑94 (MQ=60)
TGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGAT > SRR4302534.2162472/1‑94 (MQ=60)
GGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATC < SRR4302534.1190413/94‑1 (MQ=60)
GGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATC > SRR4302534.3208165/1‑94 (MQ=60)
GGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATC < SRR4302534.660827/94‑1 (MQ=60)
GAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCACGGCAGGCCAGAAAgttatgttgatgc > SRR4302534.6596654/1‑81 (MQ=60)
AATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCC < SRR4302534.5949405/94‑1 (MQ=60)
AATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAAGTCAGGTTCATCCC > SRR4302534.5533287/1‑94 (MQ=60)
ATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCG < SRR4302534.5543523/94‑1 (MQ=60)
ATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAAAGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCG < SRR4302534.3539181/94‑1 (MQ=60)
TAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGG > SRR4302534.1963291/1‑94 (MQ=60)
TAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGG > SRR4302534.4260827/1‑94 (MQ=60)
TAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATAGGCCCGGCAGGCCAGAAATTCAGGTTGCTCCCGG > SRR4302534.238460/1‑94 (MQ=60)
AAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGC < SRR4302534.1042188/94‑1 (MQ=60)
AAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGC > SRR4302534.6538144/1‑94 (MQ=60)
AAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCG > SRR4302534.3954577/1‑94 (MQ=60)
AGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGG > SRR4302534.872520/1‑94 (MQ=60)
AGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGG < SRR4302534.3677733/94‑1 (MQ=60)
TTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGA > SRR4302534.3750062/1‑94 (MQ=60)
TTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGA > SRR4302534.5447335/1‑94 (MQ=60)
TATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGAT > SRR4302534.3698743/1‑94 (MQ=60)
CCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCG > SRR4302534.3757857/1‑94 (MQ=60)
CCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCG > SRR4302534.2378627/1‑94 (MQ=60)
CCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGAGCTATGCG > SRR4302534.3880113/1‑94 (MQ=60)
CTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGTGGATATGCGG > SRR4302534.1698689/1‑94 (MQ=60)
CTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGG > SRR4302534.2226126/1‑94 (MQ=60)
TTAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCG > SRR4302534.1839099/1‑94 (MQ=60)
TAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGG > SRR4302534.5755639/1‑94 (MQ=60)
TAAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGGTGATCCCGGCGGCGATATGCGGCGG > SRR4302534.759624/1‑94 (MQ=60)
AAACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGC > SRR4302534.205297/1‑94 (MQ=60)
AACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTTATTCCGGCGGCGATATGCGGCGGCA > SRR4302534.6114614/1‑94 (MQ=60)
AACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCA > SRR4302534.6383731/1‑94 (MQ=60)
AACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCA < SRR4302534.6091492/94‑1 (MQ=60)
AACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCA < SRR4302534.4504140/94‑1 (MQ=60)
AACGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGGTGATCCCGGCGGGGATATGCGGCGGGA > SRR4302534.1648711/1‑94 (MQ=60)
CGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACC < SRR4302534.4728282/94‑1 (MQ=60)
CGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACC > SRR4302534.5177866/1‑94 (MQ=60)
CGTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACC > SRR4302534.6549607/1‑94 (MQ=60)
GTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCA > SRR4302534.2695376/1‑94 (MQ=60)
GTACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGAAGGCCCGAAATTCAGGTTGATCCCcgcgggggaatgcggccgcgcca > SRR4302534.3538750/1‑71 (MQ=60)
TACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAG > SRR4302534.1384539/1‑94 (MQ=60)
TACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAG < SRR4302534.1433027/94‑1 (MQ=60)
ACGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATAAGCGGCGGCACCAGC > SRR4302534.1601725/1‑94 (MQ=60)
CGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGNCACCAGCC > SRR4302534.5990467/1‑94 (MQ=60)
CGGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCC < SRR4302534.4127358/94‑1 (MQ=60)
GGCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGCTCCCGGCGGCGATATGCGGCGGCAACAGCCC > SRR4302534.3913579/1‑94 (MQ=60)
GCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCC > SRR4302534.5892240/1‑94 (MQ=60)
GCGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCC < SRR4302534.2951662/94‑1 (MQ=60)
CGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCGCCAGCCCCT < SRR4302534.2039708/94‑1 (MQ=60)
CGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCT < SRR4302534.4570491/94‑1 (MQ=60)
CGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCT > SRR4302534.359464/1‑94 (MQ=60)
CGAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCT < SRR4302534.6418047/94‑1 (MQ=60)
GAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTG > SRR4302534.975313/1‑94 (MQ=60)
GAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTG > SRR4302534.1605946/1‑94 (MQ=60)
GAATAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTG < SRR4302534.4524388/94‑1 (MQ=60)
TAAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGGGGCACCAGCCCCTGGTG > SRR4302534.6134373/1‑94 (MQ=60)
AAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGA > SRR4302534.1256982/1‑94 (MQ=60)
AAAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCCGCGATATGAGGCGGCACCAGCCCCTGGTGA > SRR4302534.658786/1‑94 (MQ=60)
AAGAACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCTGCACCAGCCCCTGGTGAT > SRR4302534.4839319/1‑94 (MQ=60)
AACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACA > SRR4302534.5635198/1‑94 (MQ=60)
AACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACA > SRR4302534.1821227/1‑94 (MQ=60)
AACGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACA > SRR4302534.2949641/1‑94 (MQ=60)
CGCCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGC < SRR4302534.590528/94‑1 (MQ=60)
CCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCAC > SRR4302534.361985/1‑94 (MQ=60)
CCCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCAC > SRR4302534.5013804/1‑94 (MQ=60)
CCCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACG > SRR4302534.6474659/1‑94 (MQ=60)
CCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGT < SRR4302534.2841784/94‑1 (MQ=60)
CCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGT > SRR4302534.3102139/1‑94 (MQ=60)
CCCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGT > SRR4302534.6607562/1‑94 (MQ=60)
CCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTA > SRR4302534.2286558/1‑94 (MQ=60)
CCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTA > SRR4302534.2284119/1‑94 (MQ=60)
CCAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTA > SRR4302534.1940965/1‑94 (MQ=60)
CAGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAA > SRR4302534.2617326/1‑94 (MQ=60)
AGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAG > SRR4302534.2758513/1‑94 (MQ=60)
AGACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAG < SRR4302534.375616/94‑1 (MQ=60)
GACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGA > SRR4302534.809509/1‑94 (MQ=60)
GACAGCGAAAAATCGGCTCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGA < SRR4302534.4332539/94‑1 (MQ=60)
ACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAA > SRR4302534.5310185/1‑94 (MQ=60)
ACAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAA > SRR4302534.1285200/1‑94 (MQ=60)
CAGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAAA > SRR4302534.2625620/1‑94 (MQ=60)
AGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAAAG < SRR4302534.5837698/94‑1 (MQ=60)
|
CGGCTGAACAGTTCGCCGAGATACTCCCGGAAAACGGTGGAATAAAGTTTATTGCCTTTAAACGTACGGCGAATAAAGAACGCCCCCAGACGGCGGAAAATCGGCCCGGCAGGCCAGAAATTCAGGTTGATCCCGGCGGCGATATGCGGCGGCACCAGCCCCTGGTGATACAGCACGTAAGAAAG > NC_000913/4252919‑4253103
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
