Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,508,696 |
A→G |
R110R (CGT→CGC) |
fecE ← |
ATP‑binding component of citrate‑dependent iron(III) transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,508,696 | 0 | A | G | 100.0%
| 833.6
/ NA
| 241 | R110R (CGT→CGC) | fecE | ATP‑binding component of citrate‑dependent iron(III) transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (132/109); total (132/109) |
Only 100 of 261 total aligned reads displayed.
GGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGACGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAG > NC_000913/4508606‑4508785
|
ggAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCg > 2:102754/1‑93 (MQ=255)
gAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGTGGAGAGgcgc > 1:2640080/1‑93 (MQ=255)
aaGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccc > 2:1551388/1‑93 (MQ=255)
aaGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccc > 1:3596434/1‑93 (MQ=255)
aGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGcccc < 2:2925091/93‑1 (MQ=255)
aGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGcccc > 1:2840509/1‑93 (MQ=255)
gCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccccc < 2:912966/93‑1 (MQ=255)
gCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccccc > 2:5949392/1‑93 (MQ=255)
gCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccccc > 1:6139438/1‑93 (MQ=255)
gCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccccc < 1:5297803/93‑1 (MQ=255)
gCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGccccc > 1:4047487/1‑93 (MQ=255)
tCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCag > 1:1775142/1‑93 (MQ=255)
aCCGACGAACGGCAAGATGATTGATTCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGTAGAGGCGCCCCCAGAGTGACa < 2:6419948/93‑1 (MQ=255)
aCCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACa < 2:5701139/93‑1 (MQ=255)
aCCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACa > 2:3455859/1‑93 (MQ=255)
ccGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAg < 2:2003979/93‑1 (MQ=255)
ccGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAg > 2:5419722/1‑93 (MQ=255)
cgacgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGc < 2:2337396/93‑1 (MQ=255)
gacgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGcc > 2:1148368/1‑93 (MQ=255)
gacgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGcc < 2:3937396/93‑1 (MQ=255)
acgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCa < 2:2631951/93‑1 (MQ=255)
cgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGTAGAGGCGCCCCCAGAGTGACAGCCAg < 2:6317387/93‑1 (MQ=255)
cgaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAg < 1:3230488/93‑1 (MQ=255)
gaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAgg > 2:6350397/1‑93 (MQ=255)
gaACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAgg > 2:3587094/1‑93 (MQ=255)
aCGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGa > 2:744545/1‑93 (MQ=255)
ggCATGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGAtt > 1:3047976/1‑93 (MQ=255)
ggCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGAtt > 1:3206224/1‑93 (MQ=255)
gCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTa > 1:4974346/1‑93 (MQ=255)
gCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTa > 2:5923473/1‑93 (MQ=255)
aaGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGGCCCCAGAGTGACAGCCAGGGATTACg > 2:6070165/1‑93 (MQ=255)
aGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGa > 2:1687851/1‑93 (MQ=255)
aGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGa > 1:2181962/1‑93 (MQ=255)
tgattgatCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCa > 1:5854806/1‑93 (MQ=255)
tgattgatCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCa > 1:4827777/1‑93 (MQ=255)
tgattgatCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCa > 2:702612/1‑93 (MQ=255)
gattgatCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCAt < 2:684592/93‑1 (MQ=255)
attgatCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATa < 2:5038533/93‑1 (MQ=255)
tCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGaaa < 2:178977/93‑1 (MQ=255)
ccGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAAc < 1:1426073/93‑1 (MQ=255)
ccGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAAc < 2:4676655/93‑1 (MQ=255)
cGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAAcc > 2:5204861/1‑93 (MQ=255)
gggTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGACACCa > 1:5766678/1‑93 (MQ=255)
gggTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCa > 1:1549186/1‑93 (MQ=255)
gggTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCa > 2:4433222/1‑93 (MQ=255)
gTCTGGTTCATGGCGACATTAGCTCGGGCGTTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGc < 1:3493864/93‑1 (MQ=255)
gTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGc < 2:1908511/93‑1 (MQ=255)
gTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGc < 2:1361091/93‑1 (MQ=255)
tCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCt > 1:5624020/1‑93 (MQ=255)
cTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTc < 2:125272/93‑1 (MQ=255)
tGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTct > 1:5188249/1‑92 (MQ=255)
ggTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCt < 2:3705809/93‑1 (MQ=255)
ggTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGCGACAGCCAGGGATTACGACCATACGAAACCAGCTCCt > 2:5829284/1‑93 (MQ=255)
tCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGa > 1:1096851/1‑93 (MQ=255)
cATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGAc < 1:1993890/93‑1 (MQ=255)
cATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGAc < 2:1430899/93‑1 (MQ=255)
aTGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACt < 1:488349/93‑1 (MQ=255)
tGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACtg > 2:1964549/1‑93 (MQ=255)
ggCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACtgt < 2:1326240/93‑1 (MQ=255)
cGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGa < 2:5103704/93‑1 (MQ=255)
gACATTATCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGAt < 2:1231647/93‑1 (MQ=255)
gACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGAt > 1:5110346/1‑93 (MQ=255)
gACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGAt > 2:3350873/1‑93 (MQ=255)
aTTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATccc > 1:1936141/1‑93 (MQ=255)
aTTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATccc > 2:4815173/1‑93 (MQ=255)
aTTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATccc > 2:4734267/1‑93 (MQ=255)
ttATCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATcccc < 1:2345194/93‑1 (MQ=255)
aaCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctc < 2:5051977/93‑1 (MQ=255)
aaCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctc < 2:769622/93‑1 (MQ=255)
aaCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctc > 1:6257789/1‑93 (MQ=255)
aaCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctc < 2:4355529/93‑1 (MQ=255)
aCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctct > 1:993566/1‑93 (MQ=255)
aCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctct < 1:1263759/93‑1 (MQ=255)
aCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCctct < 2:2583945/93‑1 (MQ=255)
cTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTg < 2:4250689/93‑1 (MQ=255)
cTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTg > 2:1614066/1‑93 (MQ=255)
cGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGc > 1:1292598/1‑93 (MQ=255)
cGTGCATTGTCTTAAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGc > 1:6353774/1‑93 (MQ=255)
gTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCg > 1:3806174/1‑93 (MQ=255)
gTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCg < 1:4246255/93‑1 (MQ=255)
tGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGt > 2:486063/1‑93 (MQ=255)
tGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGt > 1:4373615/1‑93 (MQ=255)
gCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGtt > 1:3927353/1‑93 (MQ=255)
cATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTa > 2:5353724/1‑93 (MQ=255)
aTTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTaa > 2:6181626/1‑93 (MQ=255)
tGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAAt > 2:2716010/1‑93 (MQ=255)
tGTCTTCAGCGGAGAGGCGACCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAAt > 1:4638080/1‑93 (MQ=255)
cTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGt < 1:3008284/93‑1 (MQ=255)
ttCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTg > 1:3709801/1‑93 (MQ=255)
aGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTg < 2:3232826/93‑1 (MQ=255)
aGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTg > 2:4547419/1‑93 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa > 2:6036923/1‑93 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa < 1:5898980/93‑1 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa > 2:5599301/1‑93 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa > 1:5978754/1‑93 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa > 2:381564/1‑93 (MQ=255)
gCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGa < 1:6464733/93‑1 (MQ=255)
gagaggCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGgc > 1:4303657/1‑93 (MQ=255)
gagaggCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGgc > 2:1297755/1‑93 (MQ=255)
gagaggCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGgc > 2:3799124/1‑93 (MQ=255)
|
GGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGACGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAG > NC_000913/4508606‑4508785
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGACGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAGCAG > NC_000913/4508603‑4508788
|
GCCGGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGG < SRR4302534.5301673/94‑1 (MQ=60)
CCGGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGC < SRR4302534.4013144/94‑1 (MQ=60)
CGGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCG < SRR4302534.3208646/94‑1 (MQ=60)
GGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGTGGAGAGGCGC > SRR4302534.2709907/1‑94 (MQ=60)
AAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCC > SRR4302534.4171370/1‑94 (MQ=60)
AAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCC < SRR4302534.2453670/94‑1 (MQ=60)
AAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCC > SRR4302534.3693157/1‑94 (MQ=60)
AAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCC < SRR4302534.4961355/94‑1 (MQ=60)
AAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCC < SRR4302534.5030165/94‑1 (MQ=60)
AAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCC > SRR4302534.2915132/1‑94 (MQ=60)
AGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCC > SRR4302534.6306426/1‑94 (MQ=60)
AGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCC > SRR4302534.4156035/1‑94 (MQ=60)
AGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCC < SRR4302534.2736290/94‑1 (MQ=60)
GCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCA < SRR4302534.5440785/94‑1 (MQ=60)
CTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAG > SRR4302534.1821215/1‑94 (MQ=60)
TCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGA < SRR4302534.415047/94‑1 (MQ=60)
CGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAG > SRR4302534.6032233/1‑94 (MQ=60)
GGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGT > SRR4302534.31166/1‑94 (MQ=60)
GTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTG < SRR4302534.550727/94‑1 (MQ=60)
TTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGA < SRR4302534.5902174/94‑1 (MQ=60)
TAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGAC > SRR4302534.701604/1‑94 (MQ=60)
AACCGATGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACA < SRR4302534.4311757/94‑1 (MQ=60)
AACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACA < SRR4302534.2341336/94‑1 (MQ=60)
AACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACA < SRR4302534.3931728/94‑1 (MQ=60)
CCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGC > SRR4302534.3605336/1‑94 (MQ=60)
CGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCC > SRR4302534.5972760/1‑94 (MQ=60)
GACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCA > SRR4302534.6237909/1‑94 (MQ=60)
ACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAG < SRR4302534.1808390/94‑1 (MQ=60)
CGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACCTTAACTCGTGCATTGTCTTCAGACGAGAGGCGCCCCCAGAGCGACCGCCAGG > SRR4302534.2876063/1‑94 (MQ=60)
CGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGG > SRR4302534.6617384/1‑94 (MQ=60)
CGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGG < SRR4302534.3316341/94‑1 (MQ=60)
AACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGATAGCCAGGGA < SRR4302534.6482956/94‑1 (MQ=60)
CGGCATGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATT > SRR4302534.3127938/1‑94 (MQ=60)
CGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATT < SRR4302534.2948783/94‑1 (MQ=60)
CGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATT > SRR4302534.3291249/1‑94 (MQ=60)
CGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATT > SRR4302534.4973896/1‑94 (MQ=60)
GGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTA > SRR4302534.5109005/1‑94 (MQ=60)
GGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTA < SRR4302534.5412890/94‑1 (MQ=60)
CAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACG < SRR4302534.1600319/94‑1 (MQ=60)
CAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACG > SRR4302534.1561766/1‑94 (MQ=60)
CAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACG < SRR4302534.5286484/94‑1 (MQ=60)
AAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGA > SRR4302534.2239635/1‑94 (MQ=60)
ATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCA > SRR4302534.4958778/1‑94 (MQ=60)
ATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCA > SRR4302534.6013773/1‑94 (MQ=60)
ATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATAC > SRR4302534.2570735/1‑94 (MQ=60)
TTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACG < SRR4302534.4393417/94‑1 (MQ=60)
TCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAAC < SRR4302534.5854458/94‑1 (MQ=60)
CCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACC < SRR4302534.1463583/94‑1 (MQ=60)
CCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACC < SRR4302534.4001831/94‑1 (MQ=60)
CCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAAAC > SRR4302534.6114053/1‑94 (MQ=60)
CGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGACACCA > SRR4302534.5923122/1‑94 (MQ=60)
CGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCA < SRR4302534.1496777/94‑1 (MQ=60)
CGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCA > SRR4302534.1589780/1‑94 (MQ=60)
CGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCA > SRR4302534.3861753/1‑94 (MQ=60)
CGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGACGGGCGCCCCCAGAGGGACAGCCAGGGATTACGACCATAAGAAACCA > SRR4302534.5774363/1‑94 (MQ=60)
GGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAG > SRR4302534.529382/1‑94 (MQ=60)
GGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGC < SRR4302534.3713611/94‑1 (MQ=60)
GTCTGGTTCATGGCGACATTAGCTCGGGCGTTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCT < SRR4302534.3587794/94‑1 (MQ=60)
GTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCT > SRR4302534.5776217/1‑94 (MQ=60)
CTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTCCGACCATACGAAACCAGCTCC < SRR4302534.6383740/94‑1 (MQ=60)
CTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCT > SRR4302534.5328094/1‑94 (MQ=60)
GGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTG < SRR4302534.3079785/94‑1 (MQ=60)
GTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGG < SRR4302534.1401850/94‑1 (MQ=60)
TTCATGGCGACATTAACTCGTGCCTTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGA > SRR4302534.3194477/1‑94 (MQ=60)
TTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGA > SRR4302534.1125407/1‑94 (MQ=60)
TCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGAC > SRR4302534.4713436/1‑94 (MQ=60)
TCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGAA < SRR4302534.1319709/94‑1 (MQ=60)
CATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACT > SRR4302534.3149497/1‑94 (MQ=60)
CATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACT < SRR4302534.2046113/94‑1 (MQ=60)
CATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACT < SRR4302534.2046114/94‑1 (MQ=60)
ATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTG < SRR4302534.500563/94‑1 (MQ=60)
ATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGATCCTGGACTG > SRR4302534.3314424/1‑94 (MQ=60)
GGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTG > SRR4302534.6050918/1‑94 (MQ=60)
CGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGAT > SRR4302534.5248251/1‑94 (MQ=60)
CGACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCACCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGAT > SRR4302534.6548519/1‑94 (MQ=60)
ACATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCC < SRR4302534.6171494/94‑1 (MQ=60)
CATTAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCC > SRR4302534.1986764/1‑94 (MQ=60)
TTATCTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCT < SRR4302534.2407427/94‑1 (MQ=60)
TAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTC > SRR4302534.6427365/1‑94 (MQ=60)
TAACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTC > SRR4302534.667645/1‑94 (MQ=60)
AACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCT < SRR4302534.2139127/94‑1 (MQ=60)
AACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCT > SRR4302534.1018998/1‑94 (MQ=60)
ACTCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTG < SRR4302534.1297054/94‑1 (MQ=60)
TCGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGC > SRR4302534.1326639/1‑94 (MQ=60)
TCGTGCATTGTCTTAAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGC > SRR4302534.6525369/1‑94 (MQ=60)
CGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCGTCTGGCG > SRR4302534.3316071/1‑94 (MQ=60)
CGTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCG > SRR4302534.3908374/1‑94 (MQ=60)
GTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGT > SRR4302534.3630478/1‑94 (MQ=60)
GTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGT > SRR4302534.4491494/1‑94 (MQ=60)
GTGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGT < SRR4302534.4360782/94‑1 (MQ=60)
TGCATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTT > SRR4302534.4032565/1‑94 (MQ=60)
CATTGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAA < SRR4302534.637482/94‑1 (MQ=60)
TTGTCTTCAGCGGAGAGGCGACCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAAT > SRR4302534.4763928/1‑94 (MQ=60)
TGTCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATG > SRR4302534.1992331/1‑94 (MQ=60)
TCTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGT < SRR4302534.4950731/94‑1 (MQ=60)
TTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTG > SRR4302534.3809536/1‑94 (MQ=60)
CTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTG > SRR4302534.5076405/1‑94 (MQ=60)
CTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTG < SRR4302534.2329351/94‑1 (MQ=60)
CTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTG < SRR4302534.3086993/94‑1 (MQ=60)
CTTCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTG > SRR4302534.129981/1‑94 (MQ=60)
TCAGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCT > SRR4302534.1833694/1‑94 (MQ=60)
AGCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGA > SRR4302534.6141155/1‑94 (MQ=60)
GCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAG < SRR4302534.6638855/94‑1 (MQ=60)
GCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAG > SRR4302534.4419672/1‑94 (MQ=60)
GCGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAG < SRR4302534.6059148/94‑1 (MQ=60)
CGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGG < SRR4302534.4741624/94‑1 (MQ=60)
CGGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGG > SRR4302534.521240/1‑94 (MQ=60)
GGAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGC > SRR4302534.4420324/1‑94 (MQ=60)
GAGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCA < SRR4302534.4433258/94‑1 (MQ=60)
AGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAG < SRR4302534.3905784/94‑1 (MQ=60)
AGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAG > SRR4302534.1199498/1‑94 (MQ=60)
AGAGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAG > SRR4302534.3513332/1‑94 (MQ=60)
AGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAGCA > SRR4302534.4371180/1‑94 (MQ=60)
AGGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAGCA > SRR4302534.3548459/1‑94 (MQ=60)
GGCGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAGCAG < SRR4302534.6051032/94‑1 (MQ=60)
|
GCCGGAAAGCTCGGTTAACCGACGAACGGCAAGATGATTGATCCGGGTCTGGTTCATGGCGACATTAACTCGTGCATTGTCTTCAGCGGAGAGACGCCCCCAGAGTGACAGCCAGGGATTACGACCATACGAAACCAGCTCCTGGACTGTGATCCCCTCTGGCGTTAAATGGTGCTGAGGCAGCAG > NC_000913/4508603‑4508788
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
