Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,561,348 |
A→G |
C49C (TGT→TGC) |
b4563 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,561,348 | 0 | A | G | 100.0%
| 601.4
/ NA
| 181 | C49C (TGT→TGC) | b4563 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (80/101); total (80/101) |
Only 100 of 195 total aligned reads displayed.
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGC > NC_000913/4561258‑4561437
|
tgtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAg < 1:3902682/93‑1 (MQ=255)
tgtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAg < 1:3682176/93‑1 (MQ=255)
gtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGTCTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAgg > 2:4527047/1‑93 (MQ=255)
gtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAgg < 2:1543515/93‑1 (MQ=255)
gtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAgg > 1:1558760/1‑93 (MQ=255)
gtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAgg < 2:136826/93‑1 (MQ=255)
tgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGt < 1:408644/93‑1 (MQ=255)
gCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTc < 1:3599631/93‑1 (MQ=255)
cAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCa > 2:1211133/1‑93 (MQ=255)
cAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCa > 1:4611982/1‑93 (MQ=255)
aaTGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAg > 2:844232/1‑93 (MQ=255)
aaTGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAg < 2:3598425/93‑1 (MQ=255)
gCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCa < 1:3270097/93‑1 (MQ=255)
gcCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGc > 2:897512/1‑93 (MQ=255)
gcCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGc > 2:1459356/1‑93 (MQ=255)
cccAGACACCATCCTGCTGGCAATAAATTGACACAGTCAGCCCAGGGACCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGc < 1:2612181/92‑1 (MQ=255)
ccAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCa > 2:6370750/1‑93 (MQ=255)
cAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCAt > 1:6103637/1‑93 (MQ=255)
aGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATa > 1:1735556/1‑93 (MQ=255)
aGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATa > 1:5062351/1‑93 (MQ=255)
gACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATaa > 2:5133870/1‑93 (MQ=255)
cacCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAcc < 1:6407242/93‑1 (MQ=255)
cacCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAcc > 2:4956023/1‑93 (MQ=255)
cccATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc < 1:5842556/92‑1 (MQ=255)
cATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGc < 1:2341585/93‑1 (MQ=255)
aTCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCa > 2:3760124/1‑93 (MQ=255)
aTCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCa > 2:4749751/1‑93 (MQ=255)
ccTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgc < 1:1866188/93‑1 (MQ=255)
tgctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccg < 2:2559523/93‑1 (MQ=255)
cgctgGCAATAAGTTGACTCAGTCGGCCAAGCGCTCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccg < 2:2559522/92‑1 (MQ=255)
ctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgcc > 2:5676737/1‑93 (MQ=255)
ctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgcc < 1:4763137/93‑1 (MQ=255)
ctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgcc < 1:2982691/93‑1 (MQ=255)
ctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgca < 1:2264970/93‑2 (MQ=255)
tgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGccgccg > 1:1357604/1‑93 (MQ=255)
tgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGccgccg < 1:5263436/93‑1 (MQ=255)
tgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGccgccg > 1:5956350/1‑93 (MQ=255)
ggCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCcgccgc > 2:1909231/1‑93 (MQ=255)
ggCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCcgccgc > 1:4153808/1‑93 (MQ=255)
cAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGt > 1:215982/1‑93 (MQ=255)
aaTAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTa > 2:4042073/1‑93 (MQ=255)
aTAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaa > 2:4388484/1‑93 (MQ=255)
tAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaaa < 2:5275397/93‑1 (MQ=255)
aaaTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAAt < 2:5910063/93‑1 (MQ=255)
aaTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAACTc > 2:393896/1‑93 (MQ=255)
aaTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATc > 1:2361367/1‑93 (MQ=255)
aTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCCAATGCATAACCCGCAGCCGCCGCGTAAATCa > 1:4533635/1‑93 (MQ=255)
ttGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCAc < 2:692462/93‑1 (MQ=255)
ttGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCAc < 2:2842877/93‑1 (MQ=255)
tcagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGa < 1:3696409/93‑1 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGaa < 2:6179349/93‑1 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGaa < 1:2732495/93‑1 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGaa < 2:3224266/93‑1 (MQ=255)
agtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAat > 2:3069583/1‑93 (MQ=255)
gtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAata > 2:2484101/1‑93 (MQ=255)
gtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAata < 2:815136/93‑1 (MQ=255)
tcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAatat < 1:2516899/93‑1 (MQ=255)
cagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATc < 2:5352845/93‑1 (MQ=255)
cagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATc > 1:1201022/1‑93 (MQ=255)
cagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATc < 2:3414060/93‑1 (MQ=255)
cagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATc < 1:6162244/93‑1 (MQ=255)
agCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCg < 2:4222393/93‑1 (MQ=255)
cAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGa > 1:1184954/1‑93 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc > 1:308673/1‑93 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc < 2:303660/93‑1 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc < 1:978385/93‑1 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc > 1:392883/1‑93 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc < 2:3322622/93‑1 (MQ=255)
gggATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAcg > 2:3285488/1‑93 (MQ=255)
gggATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAcg > 1:1605908/1‑93 (MQ=255)
gggATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAcg > 1:1117389/1‑93 (MQ=255)
cACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCAGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaa > 2:1714231/1‑93 (MQ=255)
aCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaaa > 1:1691131/1‑93 (MQ=255)
cccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAg > 1:3410699/1‑93 (MQ=255)
cccATTGTATTTCCCCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGGAAATCACGGGGAATATCGCTGACGCGAAAAg < 1:280310/93‑1 (MQ=255)
ccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGt < 2:4843360/93‑1 (MQ=255)
ccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGt < 2:3501924/93‑1 (MQ=255)
ccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGt < 2:5504113/93‑1 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc > 2:5152553/1‑93 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc > 1:1043115/1‑93 (MQ=255)
aTTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCa > 1:2001633/1‑93 (MQ=255)
gTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGc > 2:3579592/1‑93 (MQ=255)
tATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGcc < 1:1132048/93‑1 (MQ=255)
tATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGcc < 2:1636606/93‑1 (MQ=255)
tATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGcc < 2:6241216/93‑1 (MQ=255)
aTTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCAGACGCGAAAAGTCATGccc < 1:6314766/93‑1 (MQ=255)
ttCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGc < 2:382530/93‑1 (MQ=255)
ttCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGc < 1:5596036/93‑1 (MQ=255)
tCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGct > 2:2221986/1‑93 (MQ=255)
cTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctgc < 2:2535163/93‑1 (MQ=255)
tCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctgcc < 2:3313425/93‑1 (MQ=255)
tCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctgcc < 1:4910523/93‑1 (MQ=255)
ggggggGCAGGTCAGCCAAATGCATACCCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCaa < 2:2963134/93‑1 (MQ=255)
ggggggGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCaa < 1:1643510/93‑1 (MQ=255)
ggggggGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCaa > 1:496099/1‑93 (MQ=255)
ggggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAc < 2:4497768/93‑1 (MQ=255)
ggggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAc < 1:4431089/93‑1 (MQ=255)
ggggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAc > 1:3519343/1‑93 (MQ=255)
ggggGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACg < 2:5062306/93‑1 (MQ=255)
ggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGc < 1:3247592/93‑1 (MQ=255)
|
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGC > NC_000913/4561258‑4561437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG > NC_000913/4561256‑4561441
|
TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGC > SRR4302534.2733928/1‑94 (MQ=60)
TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGC < SRR4302534.4938388/94‑1 (MQ=60)
TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGC > SRR4302534.2282260/1‑94 (MQ=60)
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAG < SRR4302534.345889/94‑1 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG < SRR4302534.4007351/94‑1 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG < SRR4302534.1178868/94‑1 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG < SRR4302534.3781172/94‑1 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG > SRR4302534.1599568/1‑94 (MQ=60)
TGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTC < SRR4302534.419088/94‑1 (MQ=60)
GCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCA > SRR4302534.4737151/1‑94 (MQ=60)
GCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCA < SRR4302534.3696432/94‑1 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG < SRR4302534.50527/94‑1 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG > SRR4302534.6296176/1‑94 (MQ=60)
GCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAA < SRR4302534.3357201/94‑1 (MQ=60)
GCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCA > SRR4302534.3346669/1‑94 (MQ=60)
CCCAGACACCATCCTGCTGGCAATAAATTGACACAGTCAGCCCAGGGACCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCA < SRR4302534.2681294/94‑1 (MQ=60)
CCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCAT > SRR4302534.6269609/1‑94 (MQ=60)
CAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATA > SRR4302534.1780625/1‑94 (MQ=60)
CAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATA < SRR4302534.3718797/94‑1 (MQ=60)
CAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATA > SRR4302534.5199055/1‑94 (MQ=60)
CAGACACCATCCTGCTGGCAATAAATGCACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATA < SRR4302534.2403855/94‑1 (MQ=60)
AGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACACATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAA > SRR4302534.278061/1‑94 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC < SRR4302534.476551/94‑1 (MQ=60)
CACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCC < SRR4302534.4010350/94‑1 (MQ=60)
CACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCC < SRR4302534.6580174/94‑1 (MQ=60)
CCCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG < SRR4302534.500886/94‑1 (MQ=60)
CCCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG < SRR4302534.6001162/94‑1 (MQ=60)
ACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG > SRR4302534.3949265/1‑94 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA < SRR4302534.2403731/94‑1 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA > SRR4302534.1654589/1‑94 (MQ=60)
CCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCC < SRR4302534.1914756/94‑1 (MQ=60)
CTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCG < SRR4302534.1226959/94‑1 (MQ=60)
TGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGC > SRR4302534.2513288/1‑94 (MQ=60)
GCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCC < SRR4302534.1610040/94‑1 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG > SRR4302534.6118085/1‑94 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG < SRR4302534.3060726/94‑1 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG > SRR4302534.1393373/1‑94 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG > SRR4302534.5147124/1‑94 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG < SRR4302534.4892469/94‑1 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCAG < SRR4302534.2325045/94‑1 (MQ=60)
TGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGC > SRR4302534.4265949/1‑94 (MQ=60)
TGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGC < SRR4302534.5405625/94‑1 (MQ=60)
GCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGT > SRR4302534.221644/1‑94 (MQ=60)
CAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTA > SRR4302534.1010105/1‑94 (MQ=60)
AAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAGCCGCAGCCGCCGCGTAAATC < SRR4302534.6476133/94‑1 (MQ=60)
AAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATC > SRR4302534.2424053/1‑94 (MQ=60)
AATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCCAATGCATAACCCGCAGCCGCCGCGTAAATCA > SRR4302534.4656492/1‑94 (MQ=60)
ATTGCCTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCAC < SRR4302534.84348/94‑1 (MQ=60)
ATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCGGGGCAGCCAAATGCATAACCCGCAGCCCCCGCGTAAAACAC > SRR4302534.4198836/1‑94 (MQ=60)
ATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCAC > SRR4302534.3791239/1‑94 (MQ=60)
TTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACG > SRR4302534.3645963/1‑94 (MQ=60)
GACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGG > SRR4302534.1957324/1‑94 (MQ=60)
ACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGG < SRR4302534.4737148/94‑1 (MQ=60)
CTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGA < SRR4302534.1761602/94‑1 (MQ=60)
TCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAA < SRR4302534.3795790/94‑1 (MQ=60)
CAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAAT < SRR4302534.2804539/94‑1 (MQ=60)
CAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAAT > SRR4302534.2270211/1‑94 (MQ=60)
TCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATC > SRR4302534.1232627/1‑94 (MQ=60)
TCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATC < SRR4302534.1334607/94‑1 (MQ=60)
TCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATC < SRR4302534.2583731/94‑1 (MQ=60)
TCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATC < SRR4302534.1450418/94‑1 (MQ=60)
CAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCG < SRR4302534.6329858/94‑1 (MQ=60)
AGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGC > SRR4302534.2363028/1‑94 (MQ=60)
AGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGC > SRR4302534.4093215/1‑94 (MQ=60)
CCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGA > SRR4302534.1216094/1‑94 (MQ=60)
CAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAC > SRR4302534.316649/1‑94 (MQ=60)
CAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAC > SRR4302534.402930/1‑94 (MQ=60)
AGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACG < SRR4302534.1003355/94‑1 (MQ=60)
AGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACG > SRR4302534.1647845/1‑94 (MQ=60)
AGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACG > SRR4302534.1146570/1‑94 (MQ=60)
AGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACG > SRR4302534.1781037/1‑94 (MQ=60)
GGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGGAAATCACGGGGAATATCGCTGACGCG > SRR4302534.6047980/1‑94 (MQ=60)
GATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGA > SRR4302534.1155460/1‑94 (MQ=60)
TCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAA < SRR4302534.5897643/94‑1 (MQ=60)
CACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAA > SRR4302534.1735085/1‑94 (MQ=60)
CACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAA > SRR4302534.326903/1‑94 (MQ=60)
ACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAG > SRR4302534.3502305/1‑94 (MQ=60)
CCCATTGTATTTCCCCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGGAAATCACGGGGAATATCGCTGACGCGAAAAGT < SRR4302534.287558/94‑1 (MQ=60)
CCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTC > SRR4302534.1070051/1‑94 (MQ=60)
CATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCA > SRR4302534.2054035/1‑94 (MQ=60)
ATTGTGTTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAT < SRR4302534.2148842/94‑1 (MQ=60)
TTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGCATATCGCTGACGCGAAAAGTCATG > SRR4302534.4306638/1‑94 (MQ=60)
GTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCC > SRR4302534.3069164/1‑94 (MQ=60)
TATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCC < SRR4302534.1161637/94‑1 (MQ=60)
ATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCAGACGCGAAAAGTCATGCCCG < SRR4302534.6485452/94‑1 (MQ=60)
TTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGC < SRR4302534.6242221/94‑1 (MQ=60)
TTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCT < SRR4302534.5747355/94‑1 (MQ=60)
TTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCT < SRR4302534.5538674/94‑1 (MQ=60)
CCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGC > SRR4302534.264180/1‑94 (MQ=60)
cggcgGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCT < SRR4302534.4695109/89‑1 (MQ=60)
TCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCT < SRR4302534.5043616/94‑1 (MQ=60)
CCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCA > SRR4302534.1694886/1‑94 (MQ=60)
CGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAA > SRR4302534.508477/1‑94 (MQ=60)
CGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTCCCTGCAC > SRR4302534.2745912/1‑94 (MQ=60)
GGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAC < SRR4302534.1686356/94‑1 (MQ=60)
GGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAC > SRR4302534.2817915/1‑94 (MQ=60)
GGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAC < SRR4302534.6504485/94‑1 (MQ=60)
GGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAC > SRR4302534.3613997/1‑94 (MQ=60)
GGGCGGGCAGGACAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATAGCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAC < SRR4302534.4600985/94‑1 (MQ=60)
GGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACG < SRR4302534.4550730/94‑1 (MQ=60)
GGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGC > SRR4302534.3535972/1‑94 (MQ=60)
GGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCT < SRR4302534.3334066/94‑1 (MQ=60)
GGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTT < SRR4302534.54950/94‑1 (MQ=60)
GGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTT < SRR4302534.3872122/94‑1 (MQ=60)
GGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTT < SRR4302534.6649883/94‑1 (MQ=60)
GGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTT < SRR4302534.927997/94‑1 (MQ=60)
GCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG < SRR4302534.1794387/94‑1 (MQ=60)
GCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTCCCTGCAACGCTTTG < SRR4302534.6649141/94‑1 (MQ=60)
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TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG > NC_000913/4561256‑4561441
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
