Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F202 I0 R1
|
1397 |
275.7 |
9089454 |
95.2% |
8653160 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
486,912 |
C→A |
16.7% |
I15I (ATC→ATA) |
apt → |
adenine phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 486,912 | 0 | C | A | 16.7%
| 767.7
/ 96.4
| 255 | I15I (ATC→ATA) | apt | adenine phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (113/99); new base A (25/18); total (138/117) |
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 261 total aligned reads displayed.
GGCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGC > CP009273/486763‑487061
|
ggCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATc < 2:3471400/150‑1 (MQ=255)
ttttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCaaaa > 2:1571269/1‑150 (MQ=255)
ttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGc < 2:1018733/150‑1 (MQ=255)
aGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAATACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTc > 2:1520921/1‑150 (MQ=255)
aGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTc > 2:3256816/1‑150 (MQ=255)
ggcgcaggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACt > 1:545971/1‑150 (MQ=255)
cgcaggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTAc < 2:354977/150‑1 (MQ=255)
aggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCa > 1:1225439/1‑150 (MQ=255)
ggTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAAc > 1:3718758/1‑150 (MQ=255)
gTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAAcc > 2:1717344/1‑150 (MQ=255)
cAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCg < 1:34745/150‑1 (MQ=255)
aaaGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCgg > 2:2496866/1‑150 (MQ=255)
aaGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGc > 2:3314068/1‑150 (MQ=255)
aaGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGc > 2:4370132/1‑150 (MQ=255)
aaGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCAAAAACCCGGc > 2:3513764/1‑150 (MQ=255)
aGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCa < 1:719431/150‑1 (MQ=255)
tAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCt > 2:3533365/1‑150 (MQ=255)
acaacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCtttt > 1:685842/1‑150 (MQ=255)
caacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTc < 1:555134/150‑1 (MQ=255)
caacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTc < 1:555007/150‑1 (MQ=255)
caacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTc < 1:555001/150‑1 (MQ=255)
aacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTcc < 1:3758839/150‑1 (MQ=255)
acTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCcg < 1:1093420/150‑1 (MQ=255)
tGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCcgcg < 2:2184062/150‑1 (MQ=255)
gTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGa > 1:2262076/1‑150 (MQ=255)
ttACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGAt < 2:1663079/150‑1 (MQ=255)
ttttGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCa > 1:2332961/1‑150 (MQ=255)
ttttGATACGTTTAAAACGCGCCGTGAGTAACACCGTAACAAGCAGTCATACAATTATGACAGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCa > 1:2332477/1‑150 (MQ=255)
aTACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGc > 1:3110481/1‑150 (MQ=255)
aTACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGc > 1:3110422/1‑150 (MQ=255)
aTACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGc > 2:1828106/1‑150 (MQ=255)
aTACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGc > 2:1826779/1‑150 (MQ=255)
aTACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGc > 2:4079332/1‑150 (MQ=255)
tACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCt > 1:658721/1‑150 (MQ=255)
cGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTa > 1:2277734/1‑150 (MQ=255)
gTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTAc > 1:4162371/1‑150 (MQ=255)
gTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTAAc > 2:2835475/1‑150 (MQ=255)
gTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTAc > 2:593423/1‑150 (MQ=255)
tAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTgg > 2:398246/1‑150 (MQ=255)
tAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTgg < 2:2428261/150‑1 (MQ=255)
cgcgCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGAc < 1:4274844/150‑1 (MQ=255)
gcCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCg > 1:1322885/1‑150 (MQ=255)
gcCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCg > 1:2651427/1‑150 (MQ=255)
cGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGaa > 1:431711/1‑150 (MQ=255)
tGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAg < 1:4537980/150‑1 (MQ=255)
aGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCt < 1:3214850/150‑1 (MQ=255)
gTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCtt > 2:1180893/1‑150 (MQ=255)
accGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGct < 1:3402053/150‑1 (MQ=255)
accGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGct < 1:2836448/150‑1 (MQ=255)
cGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCCAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGctct < 1:1138604/150‑1 (MQ=255)
cGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGctct < 1:3117013/150‑1 (MQ=255)
aaCAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAg > 2:4019652/1‑150 (MQ=255)
aaCAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAg < 2:3118848/150‑1 (MQ=255)
aaCAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAg < 2:3120051/150‑1 (MQ=255)
cAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCa < 2:2878002/150‑1 (MQ=255)
aaGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCAt < 1:1656311/150‑1 (MQ=255)
cAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGa < 1:734192/150‑1 (MQ=255)
tACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCt < 2:2816553/150‑1 (MQ=255)
tACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCt < 1:4014998/150‑1 (MQ=255)
cacTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTgg < 1:2695092/150‑1 (MQ=255)
cTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCCAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGtt < 1:1531896/150‑1 (MQ=255)
cTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGtt < 1:381844/150‑1 (MQ=255)
tATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGa < 2:3341656/150‑1 (MQ=255)
tGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGc > 1:1075208/1‑150 (MQ=255)
aCCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGt > 1:1813721/1‑150 (MQ=255)
aCCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGt > 2:2964001/1‑150 (MQ=255)
cgcgACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTa > 2:3820524/1‑150 (MQ=255)
aCTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaaa < 2:2277846/150‑1 (MQ=255)
cTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCCCAGCATCGACTTGCTGGTTGAGCGTTACaaaa < 1:686028/150‑1 (MQ=255)
tGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTGACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaaaaa < 2:2533515/150‑1 (MQ=255)
acaGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGc > 1:1482699/1‑150 (MQ=255)
agcagcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCgg < 1:536874/150‑1 (MQ=255)
agcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCa < 2:1326655/150‑1 (MQ=255)
agcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCa < 1:2690058/150‑1 (MQ=255)
gcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCAt > 1:2453567/1‑150 (MQ=255)
cTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCAtt < 1:2672730/150‑1 (MQ=255)
ttGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTa > 2:270784/1‑150 (MQ=255)
ttGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTa < 2:2053093/150‑1 (MQ=255)
tGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTAc < 2:3410728/150‑1 (MQ=255)
gAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTAcc < 2:4170111/150‑1 (MQ=255)
gAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTAGAGCGTTACAAAAATGCGGGCATTAcc > 2:3918075/1‑150 (MQ=255)
tATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCaaa > 2:2078238/1‑150 (MQ=255)
tATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCaaa < 1:4467930/150‑1 (MQ=255)
tATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCaaa > 1:697006/1‑150 (MQ=255)
aTCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAg > 1:4230760/1‑150 (MQ=255)
tctcAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGt < 2:1194808/150‑1 (MQ=255)
tctcAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGt < 2:3462263/150‑1 (MQ=255)
ctcAAAAATAGCATCAAAAGCATTCAGGACTACCAAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGtt < 1:3511880/150‑1 (MQ=255)
ctcAAAAATAGCATCAAAAGCATTCAGGACTACCAAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGtt < 1:3513764/150‑1 (MQ=255)
tcAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTg < 2:4051873/150‑1 (MQ=255)
tcAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGAGGGCATTACCAAAGATg > 1:3297404/1‑150 (MQ=255)
cAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGt > 2:2901286/1‑150 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg < 1:2581330/150‑1 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg > 1:3925802/1‑150 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTCACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg > 1:1668261/1‑150 (MQ=255)
aaaTAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg > 1:1421499/1‑150 (MQ=255)
tAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCAc > 1:377653/1‑150 (MQ=255)
aGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCAcc < 2:659344/150‑1 (MQ=255)
gCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCg > 2:1672145/1‑150 (MQ=255)
cAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAgc < 1:1600451/150‑1 (MQ=255)
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GGCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGC > CP009273/486763‑487061
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
