Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F142 I0 R1
|
859 |
274.6 |
8723680 |
96.4% |
8409627 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
486,912 |
C→A |
7.9% |
I15I (ATC→ATA) |
apt → |
adenine phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 486,912 | 0 | C | A | 7.9%
| 950.0
/ 39.0
| 253 | I15I (ATC→ATA) | apt | adenine phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (147/86); new base A (5/15); total (152/101) |
| Fisher's exact test for biased strand distribution p-value = 1.39e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 259 total aligned reads displayed.
GGCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGC > CP009273/486763‑487061
|
ggCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATc > 2:1393939/1‑150 (MQ=255)
gCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCa < 1:2216394/150‑1 (MQ=255)
gTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCaaa > 2:1067696/1‑150 (MQ=255)
tttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGTCATACACTTATGACCGCGACTGCAAAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAg < 1:3093994/150‑1 (MQ=255)
tttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAg < 1:1086506/150‑1 (MQ=255)
tttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAg < 1:961538/150‑1 (MQ=255)
tttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAg < 1:3899228/150‑1 (MQ=255)
ttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGc > 2:857481/1‑150 (MQ=255)
ttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGc < 1:3740374/150‑1 (MQ=255)
ttCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGc < 1:816212/150‑1 (MQ=255)
tCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCa < 1:2845921/150‑1 (MQ=255)
gAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCAtt > 1:2791910/1‑150 (MQ=255)
gAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCAtt < 2:1552607/150‑1 (MQ=255)
cacaGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAg > 1:716528/1‑150 (MQ=255)
caggcgcaggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGa > 1:4172216/1‑150 (MQ=255)
agcaggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTAc > 2:1843447/2‑150 (MQ=255)
gcaggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTAcc < 2:389683/150‑1 (MQ=255)
caggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTAccc < 2:2204492/150‑1 (MQ=255)
aggcgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCa < 1:2655501/150‑1 (MQ=255)
cgGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGTATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCaaaa > 1:1639546/1‑150 (MQ=255)
ggTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAAc > 1:1253720/1‑150 (MQ=255)
aaGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGc > 2:3112022/1‑150 (MQ=255)
ggTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCAt > 1:3665813/1‑150 (MQ=255)
ttAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTc < 1:1375102/150‑1 (MQ=255)
ttAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTc < 1:3154109/150‑1 (MQ=255)
ttAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTc < 2:737227/150‑1 (MQ=255)
tAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCt < 2:445727/150‑1 (MQ=255)
aaaCAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCtt > 1:2439327/1‑150 (MQ=255)
aacaacTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCttt < 1:2315728/150‑1 (MQ=255)
acaacTGTTAATTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCtttt < 1:2941418/150‑1 (MQ=255)
acTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCcg > 2:4170487/1‑150 (MQ=255)
cTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCcgc > 2:1675116/1‑150 (MQ=255)
cTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCcgc > 1:266278/1‑150 (MQ=255)
gTTACTTTTGATACGTTTAAAACTCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGa > 2:34515/1‑150 (MQ=255)
ttACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGAt > 2:2344234/1‑150 (MQ=255)
ttACTTTTGATACGTTTAAAACGCGCAGTGAGTAACACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCCTCAAAATCATTAAGGACTACCCAAAACCCAGCATTCTTTAACGCGAt > 1:3382729/1‑150 (MQ=255)
tACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATg < 2:187725/150‑1 (MQ=255)
aCTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGt > 1:351163/1‑150 (MQ=255)
aCGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCtt < 1:3582167/150‑1 (MQ=255)
cGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTa < 1:1966076/150‑1 (MQ=255)
gTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTAc > 2:2019746/1‑150 (MQ=255)
gTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTAc > 2:2999332/1‑150 (MQ=255)
tttAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACt < 2:241537/150‑1 (MQ=255)
ttAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTg > 1:480972/1‑150 (MQ=255)
aaaCGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGaa > 1:4305616/1‑150 (MQ=255)
aaCGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAg < 2:2075279/150‑1 (MQ=255)
aaCGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAg > 1:932113/1‑150 (MQ=255)
aCGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCATGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGa > 1:3439409/1‑150 (MQ=255)
cgcCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGAccc < 2:2548953/150‑1 (MQ=255)
cgcCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGAccc < 2:3665813/150‑1 (MQ=255)
gcCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCg < 2:1461972/150‑1 (MQ=255)
cGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGaa > 2:3949391/1‑150 (MQ=255)
tACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTa < 1:1547794/150‑1 (MQ=255)
accaccGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTAc > 1:393902/1‑150 (MQ=255)
ccaccGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACg > 2:2017471/1‑150 (MQ=255)
ccaccGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACg > 2:303380/1‑150 (MQ=255)
caccGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGc > 2:3793855/1‑150 (MQ=255)
tAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCa > 2:3834014/1‑150 (MQ=255)
aCAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCTGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGc > 1:1761302/1‑150 (MQ=255)
aGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATc > 2:4211763/1‑150 (MQ=255)
gCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCg > 2:2980061/1‑150 (MQ=255)
gCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCg < 1:1068006/150‑1 (MQ=255)
gCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACtt < 2:1685991/150‑1 (MQ=255)
cATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTg < 1:4050139/150‑1 (MQ=255)
ttATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTg < 1:1903129/150‑1 (MQ=255)
tATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGa > 2:1090594/1‑150 (MQ=255)
aTGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAg > 2:266858/1‑150 (MQ=255)
tGACCGCGACTGCACAGCAGCTTGAGTCTCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGc < 1:4144861/150‑1 (MQ=255)
ccGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGtt < 1:2006714/150‑1 (MQ=255)
cgcgACTGCACATCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTAACCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGATTACGCTCTCAGCATCGACTTGCTGGATGAgaggta > 1:2344766/1‑145 (MQ=255)
cgACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACa < 1:1694406/150‑1 (MQ=255)
gACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaa > 2:1602444/1‑150 (MQ=255)
aCTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaaa > 1:1722804/1‑150 (MQ=255)
aCTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaaa > 1:3954852/1‑150 (MQ=255)
tGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACaaaaa > 1:217508/1‑150 (MQ=255)
agcagcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCgg > 2:2114214/1‑150 (MQ=255)
cagcTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGc < 2:4101448/150‑1 (MQ=255)
cTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCAtt < 1:1444161/150‑1 (MQ=255)
cTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCAtt > 1:1181609/1‑150 (MQ=255)
ttGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTa < 1:1330500/150‑1 (MQ=255)
ttGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTa < 2:2209113/150‑1 (MQ=255)
tGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTAc > 2:3876954/1‑150 (MQ=255)
tGAGTATCTCAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTAc < 1:3622317/150‑1 (MQ=255)
gAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTAcc < 1:324407/150‑1 (MQ=255)
tATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCaaa > 1:758975/1‑150 (MQ=255)
aTCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAg > 1:1604024/1‑150 (MQ=255)
ctcAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGtt < 1:2029601/150‑1 (MQ=255)
ctcAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGtt > 2:2440696/1‑150 (MQ=255)
tcAAAAATAGCATAAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTg > 1:398085/1‑150 (MQ=255)
cAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGt > 2:3314582/1‑150 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg < 2:2791910/150‑1 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg > 2:759439/1‑150 (MQ=255)
aaaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCgg < 1:487220/150‑1 (MQ=255)
aaTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGc < 2:1437343/150‑1 (MQ=255)
aTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCCTTACCAAAGTTGTCGGcc > 1:3799163/1‑149 (MQ=255)
aTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCa > 1:3472451/1‑150 (MQ=255)
aTAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCa < 2:504730/150‑1 (MQ=255)
aTCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGaa > 2:1444842/1‑150 (MQ=255)
tCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAg > 1:2996343/1‑150 (MQ=255)
cAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAgc > 1:960039/1‑150 (MQ=255)
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GGCGTTTTCGAGCACAGGCGCAGGCGGTCAAAGGTTAAACAACTGTTACTTTTGATACGTTTAAAACGCGCCGTGAGTACCACCGTAACAAGCAGGCATACACTTATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGC > CP009273/486763‑487061
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
