Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F368 I0 R1 1472 214.4 7116750 95.9% 6824963 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,988,355 C→A 100% pseudogene (97/633 nt) ygeK ← pseudogene; putative 2‑component transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,988,3550CA98.6% 647.7 / ‑0.8 207pseudogene (97/633 nt)ygeKpseudogene; putative 2‑component transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (0/3);  new base A (78/126);  total (78/129)
Fisher's exact test for biased strand distribution p-value = 2.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.
Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch.

Only 100 of 211 total aligned reads displayed.

AATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC  >  CP009273/2988209‑2988499
                                                                                                                                                  |                                                                                                                                                
aataTGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCcaaca                                                                                                                                                 >  1:992561/1‑148 (MQ=255)
   atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAAcc                                                                                                                                              >  2:1434597/1‑148 (MQ=255)
   atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAAcc                                                                                                                                              >  1:1190983/1‑148 (MQ=255)
   atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAAcc                                                                                                                                              <  1:908858/148‑1 (MQ=255)
       gCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCat                                                                                                                                          >  1:3252762/1‑148 (MQ=255)
         atctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCatat                                                                                                                                        <  2:2322188/148‑1 (MQ=255)
            tatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaaa                                                                                                                                     <  2:2636683/148‑1 (MQ=255)
            tatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaaa                                                                                                                                     >  2:2390357/1‑148 (MQ=255)
            tatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaaa                                                                                                                                     <  2:572216/148‑1 (MQ=255)
               ctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCa                                                                                                                                  >  2:1145292/1‑148 (MQ=255)
               ctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCa                                                                                                                                  >  2:1651953/1‑148 (MQ=255)
               ctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCa                                                                                                                                  >  2:228230/1‑148 (MQ=255)
               ctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCACCAAAAACCTCATATAAATCa                                                                                                                                  >  2:3436454/1‑148 (MQ=255)
                ttATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAg                                                                                                                                 <  2:707272/148‑1 (MQ=255)
                 tATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAgg                                                                                                                                <  1:2026608/148‑1 (MQ=255)
                  aTGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGa                                                                                                                               <  2:3251404/148‑1 (MQ=255)
                   tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGAt                                                                                                                              <  2:2063339/148‑1 (MQ=255)
                   tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGAt                                                                                                                              <  1:3066815/148‑1 (MQ=255)
                    gCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATa                                                                                                                             <  2:2263559/148‑1 (MQ=255)
                     cGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATaa                                                                                                                            <  1:2144685/148‑1 (MQ=255)
                      gATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAAt                                                                                                                           <  2:3096603/148‑1 (MQ=255)
                      gATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAAt                                                                                                                           <  2:1326694/148‑1 (MQ=255)
                       aTTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATg                                                                                                                          >  1:1728556/1‑148 (MQ=255)
                        tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGt                                                                                                                         <  2:1935902/148‑1 (MQ=255)
                        tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGt                                                                                                                         <  2:3006535/148‑1 (MQ=255)
                         ttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTc                                                                                                                        <  1:1145292/148‑1 (MQ=255)
                           aaCCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCg                                                                                                                      <  1:1178828/148‑1 (MQ=255)
                            aCCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCga                                                                                                                     >  2:3387479/1‑148 (MQ=255)
                              ccATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCgaga                                                                                                                   >  2:2641453/1‑148 (MQ=255)
                              ccATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCgaga                                                                                                                   >  1:1519394/1‑148 (MQ=255)
                                aTTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGaaa                                                                                                                 <  2:1244091/148‑1 (MQ=255)
                                  tttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATc                                                                                                               >  2:2910852/1‑148 (MQ=255)
                                   ttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATcc                                                                                                              <  2:3159324/148‑1 (MQ=255)
                                   ttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATcc                                                                                                              <  2:1580696/148‑1 (MQ=255)
                                     aCGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCaa                                                                                                            <  1:1256878/148‑1 (MQ=255)
                                      cGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAAt                                                                                                           >  1:762605/1‑148 (MQ=255)
                                        aGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTa                                                                                                         <  1:375447/148‑1 (MQ=255)
                                          ttCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGAGTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATc                                                                                                       >  2:2718044/1‑148 (MQ=255)
                                            cGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATccc                                                                                                     <  2:1543686/148‑1 (MQ=255)
                                            cGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATccc                                                                                                     <  1:2626765/148‑1 (MQ=255)
                                                  ccATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCatcaat                                                                                               <  2:2224365/148‑1 (MQ=255)
                                                        ttCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                                                                                         <  2:792231/148‑1 (MQ=255)
                                                         tCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAAc                                                                                        >  1:1913612/1‑148 (MQ=255)
                                                          ccACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACg                                                                                       >  1:261385/1‑148 (MQ=255)
                                                          ccACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACg                                                                                       >  1:1470287/1‑148 (MQ=255)
                                                                gCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGgctgct                                                                                 >  2:946229/1‑148 (MQ=255)
                                                                       ctcCTAAAATAAATTTTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGa                                                                          <  1:1453631/148‑1 (MQ=255)
                                                                       ctcATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGa                                                                          <  1:239510/148‑1 (MQ=255)
                                                                        tcCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGaa                                                                         >  2:580901/1‑148 (MQ=255)
                                                                         ccTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGaaa                                                                        <  2:491084/148‑1 (MQ=255)
                                                                           tAAAATAAATTTTTTGGGTGTATATTTTTTACACTCCGATATAGCTTTCTTCATATATTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCAAATTACCCAATCAAACATACACGGCTGCTGATCTGAAACt                                                                      <  1:316046/148‑1 (MQ=255)
                                                                           tAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACt                                                                      >  2:3129418/1‑148 (MQ=255)
                                                                            aaaaTAAATTTTTTGGCTGTAGATTTGTTACACTCCGCTTTAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATTCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTa                                                                     <  2:904457/148‑1 (MQ=255)
                                                                            aaaaTAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATTCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTa                                                                     <  2:1498463/148‑1 (MQ=255)
                                                                                taaataTTTAGGCTTTAGTTTTGTTACACTCCGCTATAGCTTTCTTCCGATCTTTATAGCCCCCAAAAACCTCATATAAATCCGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaat                                                                 <  1:3376648/148‑1 (MQ=255)
                                                                                   atatTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaatttt                                                              >  1:2919428/1‑148 (MQ=255)
                                                                                    tatTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaatttta                                                             >  1:2131702/1‑148 (MQ=255)
                                                                                     atTTAGGCTTTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTAATATAAATCAGCATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaa                                                            <  1:3088620/148‑1 (MQ=255)
                                                                                      tttAGGCTGTAGATTTGTTACACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaat                                                           <  2:2134627/148‑1 (MQ=255)
                                                                                       ttAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaatt                                                          <  2:2375645/148‑1 (MQ=255)
                                                                                        tAGGCTTTAGATTTTTTACACTCCTCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaattt                                                         <  2:28770/148‑1 (MQ=255)
                                                                                         aGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaatttt                                                        <  2:1017604/148‑1 (MQ=255)
                                                                                           gCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTc                                                      <  1:2302833/148‑1 (MQ=255)
                                                                                             tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATCGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTccc                                                    <  2:766417/148‑1 (MQ=255)
                                                                                               tataTTTGTTACACTACGCTATAGCTTTCTTCAGATGTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCat                                                  <  2:3137266/145‑1 (MQ=255)
                                                                                               tAGATTTGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCat                                                  <  1:3225266/148‑1 (MQ=255)
                                                                                                aGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCata                                                 >  1:3386918/1‑148 (MQ=255)
                                                                                                   tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCatatat                                              >  1:1089217/1‑148 (MQ=255)
                                                                                                    ttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATAtt                                             >  1:353650/1‑148 (MQ=255)
                                                                                                       ttACACTCCGATATAGCTTTCTACATATATTTATAGCCCCAAAAAACCTAATATAAATCAGTATAATGTCCGAGAAATCAAATTATCCCATCAATCAAAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCAt                                          <  1:309069/148‑1 (MQ=255)
                                                                                                        tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATc                                         <  2:1344331/148‑1 (MQ=255)
                                                                                                          cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCt                                       <  2:2506327/148‑1 (MQ=255)
                                                                                                            cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGa                                     >  1:1026670/1‑148 (MQ=255)
                                                                                                             tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAg                                    <  2:1736390/148‑1 (MQ=255)
                                                                                                              ccGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgt                                   <  1:3074978/148‑1 (MQ=255)
                                                                                                              ccGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgt                                   >  2:1824074/1‑148 (MQ=255)
                                                                                                               cGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgtg                                  >  1:2683150/1‑148 (MQ=255)
                                                                                                                gCTATAGCTTTCTTCATATCTTTATAGCCCCAAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgtgt                                 <  1:392310/148‑1 (MQ=255)
                                                                                                                  tataGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTaa                               <  2:2522289/148‑1 (MQ=255)
                                                                                                                   ataGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTaaa                              >  2:1866795/1‑148 (MQ=255)
                                                                                                                     aGCTTTCTTCAGATCTTTATCCCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCAAATTACCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATg                            <  1:617778/148‑1 (MQ=255)
                                                                                                                     aGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATg                            <  1:1434597/148‑1 (MQ=255)
                                                                                                                      gCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGc                           <  2:2945432/148‑1 (MQ=255)
                                                                                                                      gCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGc                           <  2:3510396/148‑1 (MQ=255)
                                                                                                                          tcttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTa                       <  1:269933/148‑1 (MQ=255)
                                                                                                                          tcttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTa                       <  1:2065339/148‑1 (MQ=255)
                                                                                                                            ttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAAc                     <  2:636827/148‑1 (MQ=255)
                                                                                                                             tcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACg                    >  2:1763152/1‑148 (MQ=255)
                                                                                                                               aGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGca                  <  2:2360358/148‑1 (MQ=255)
                                                                                                                                gATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcat                 <  1:1962602/148‑1 (MQ=255)
                                                                                                                                 aTCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcatt                <  1:3129650/148‑1 (MQ=255)
                                                                                                                                     ttATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattcatt            <  2:3451914/148‑1 (MQ=255)
                                                                                                                                     ttATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattcatt            >  2:2971544/1‑148 (MQ=255)
                                                                                                                                       ataGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTta          <  1:3436454/148‑1 (MQ=255)
                                                                                                                                         aGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTtata        >  2:2797833/1‑148 (MQ=255)
                                                                                                                                            ccccAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAatc     <  1:1767748/148‑1 (MQ=255)
                                                                                                                                            ccccAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAatc     >  2:1456394/1‑148 (MQ=255)
                                                                                                                                             cccAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAatca    <  1:469672/148‑1 (MQ=255)
                                                                                                                                             cccAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCATGAGTGTAAATGCTTTAACGCATTCATTTATAataa    >  2:2146704/1‑146 (MQ=255)
                                                                                                                                              ccAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAatcat   >  1:1997228/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
AATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC  >  CP009273/2988209‑2988499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  CP009273/2988206‑2988503
                                                                                                                                                     |                                                                                                                                                    
AATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAA                                                                                                                                                      >  SRR19973067.1958687/1‑150 (MQ=60)
 ATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCCAACA                                                                                                                                                     >  SRR19973067.999392/1‑150 (MQ=60)
 ATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCCAACA                                                                                                                                                     >  SRR19973067.976023/1‑150 (MQ=60)
    ATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACC                                                                                                                                                  >  SRR19973067.1198812/1‑150 (MQ=60)
      ATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTC                                                                                                                                                <  SRR19973067.914886/150‑1 (MQ=60)
        GAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCAT                                                                                                                                              >  SRR19973067.3273107/1‑150 (MQ=60)
         AGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATA                                                                                                                                             >  SRR19973067.1327816/1‑150 (MQ=60)
            ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973067.2707398/1‑150 (MQ=60)
              CTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAAT                                                                                                                                        >  SRR19973067.641106/1‑150 (MQ=60)
                    TATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGAT                                                                                                                                  <  SRR19973067.2040210/150‑1 (MQ=60)
                     ATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATA                                                                                                                                 >  SRR19973067.3285360/1‑150 (MQ=60)
                      TGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAA                                                                                                                                <  SRR19973067.3086333/150‑1 (MQ=60)
                        CGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATG                                                                                                                              <  SRR19973067.2159021/150‑1 (MQ=60)
                        CGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATG                                                                                                                              <  SRR19973067.2950213/150‑1 (MQ=60)
                        CGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATG                                                                                                                              >  SRR19973067.1740395/1‑150 (MQ=60)
                         GATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGT                                                                                                                             >  SRR19973067.601532/1‑150 (MQ=60)
                            TTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCG                                                                                                                          <  SRR19973067.1152969/150‑1 (MQ=60)
                              AACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAG                                                                                                                        <  SRR19973067.1186617/150‑1 (MQ=60)
                              AACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAG                                                                                                                        <  SRR19973067.851984/150‑1 (MQ=60)
                               ACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGA                                                                                                                       >  SRR19973067.1529556/1‑150 (MQ=60)
                               ACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGA                                                                                                                       >  SRR19973067.1529690/1‑150 (MQ=60)
                                   ATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATC                                                                                                                   >  SRR19973067.354805/1‑150 (MQ=60)
                                       TACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAAT                                                                                                               >  SRR19973067.767903/1‑150 (MQ=60)
                                        ACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATT                                                                                                              <  SRR19973067.1265385/150‑1 (MQ=60)
                                         CGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTA                                                                                                             <  SRR19973067.1072981/150‑1 (MQ=60)
                                           AGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC                                                                                                           <  SRR19973067.378060/150‑1 (MQ=60)
                                            GTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC                                                                                                          <  SRR19973067.1941631/150‑1 (MQ=60)
                                               CGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCAT                                                                                                       <  SRR19973067.2643790/150‑1 (MQ=60)
                                                    CCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATC                                                                                                  <  SRR19973067.3215873/150‑1 (MQ=60)
                                                         CATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCACTTATCCCATCAATCATAAA                                                                                             >  SRR19973067.2131147/1‑150 (MQ=60)
                                                          ATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAAC                                                                                            >  SRR19973067.1926670/1‑150 (MQ=60)
                                                           TTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACG                                                                                           >  SRR19973067.1480084/1‑150 (MQ=60)
                                                           TTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACG                                                                                           >  SRR19973067.263164/1‑150 (MQ=60)
                                                           TTCCACCTGCAAATTCTACTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACG                                                                                           <  SRR19973067.315814/150‑1 (MQ=60)
                                                                 ctgaaaattatcataaaataaattttttggctgttttttttttacactccgttttagatttattcatattTTTATAGCCCCCAAAAACCTAATATAAATCTGGATATTGTCCGATAAATCAATTTATCCAATCAATCATAAACGGCTGCT                                                                                     <  SRR19973067.3464879/80‑1 (MQ=39)
                                                                      AATTCTCCTAAAATAAATATTTAGGCTGTATATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCTAGAAATCAAATTATCCCATCAATCATAAACGGCTGCTGATCT                                                                                <  SRR19973067.237928/150‑1 (MQ=60)
                                                                       ATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTG                                                                               >  SRR19973067.1751728/1‑150 (MQ=60)
                                                                          CTCCTAAAATAAATTTTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAA                                                                            <  SRR19973067.1463363/150‑1 (MQ=60)
                                                                          CTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAA                                                                            <  SRR19973067.1463586/150‑1 (MQ=60)
                                                                          CTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAA                                                                            >  SRR19973067.1159888/1‑150 (MQ=60)
                                                                          CTCATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAA                                                                            <  SRR19973067.241185/150‑1 (MQ=60)
                                                                          CTCATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAA                                                                            <  SRR19973067.2047918/150‑1 (MQ=60)
                                                                              TAAAATAAATTTTTTGGGTGTATATTTTTTACACTCCGATATAGCTTTCTTCATATATTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCAAATTACCCAATCAAACATACACGGCTGCTGATCTGAAACTAC                                                                        <  SRR19973067.318169/150‑1 (MQ=60)
                                                                               AAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACA                                                                       <  SRR19973067.1200452/150‑1 (MQ=60)
                                                                                   TAAATATTTAGGCTTTAGTTTTGTTACACTCCGCTATAGCTTTCTTCCGATCTTTATAGCCCCCAAAAACCTCATATAAATCCGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTT                                                                   <  SRR19973067.3398112/150‑1 (MQ=60)
                                                                                    AAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTT                                                                  >  SRR19973067.2937998/1‑150 (MQ=60)
                                                                                     AATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTA                                                                 >  SRR19973067.2145937/1‑150 (MQ=60)
                                                                                       TATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAAT                                                               >  SRR19973067.2638708/1‑150 (MQ=60)
                                                                                        ATTTAGGCTTTATATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATCGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCAAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              <  SRR19973067.3102521/150‑1 (MQ=60)
                                                                                        ATTTAGGCTTTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTAATATAAATCAGCATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              <  SRR19973067.3108273/150‑1 (MQ=60)
                                                                                        ATTTAGGCTGTCTATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAAACAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              <  SRR19973067.2027166/150‑1 (MQ=60)
                                                                                        ATTTAGGCTGTATATTTGTTACACTCCGCTATAGCTTTCTTCAGATATTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              <  SRR19973067.2930450/150‑1 (MQ=60)
                                                                                        ATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              <  SRR19973067.1145827/150‑1 (MQ=60)
                                                                                              GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCC                                                        <  SRR19973067.2318008/150‑1 (MQ=60)
                                                                                               CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCA                                                       >  SRR19973067.1192184/1‑150 (MQ=60)
                                                                                                 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATA                                                     >  SRR19973067.3408442/1‑150 (MQ=60)
                                                                                                 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATA                                                     >  SRR19973067.3407249/1‑150 (MQ=60)
                                                                                                  TAGATTTGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATAT                                                    <  SRR19973067.3245527/150‑1 (MQ=60)
                                                                                                    GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATAT                                                  >  SRR19973067.1096656/1‑150 (MQ=60)
                                                                                                    GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATAT                                                  >  SRR19973067.1656354/1‑150 (MQ=60)
                                                                                                     ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATT                                                 >  SRR19973067.356198/1‑150 (MQ=60)
                                                                                                     ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATT                                                 >  SRR19973067.2158681/1‑150 (MQ=60)
                                                                                                     ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATT                                                 >  SRR19973067.356096/1‑150 (MQ=60)
                                                                                                        TGTTACACTCCGCTATAGCTTTATTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCAT                                              <  SRR19973067.388267/150‑1 (MQ=60)
                                                                                                        TGTTACACTCCGCTATAGATTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCAT                                              <  SRR19973067.2000640/150‑1 (MQ=60)
                                                                                                          TTACCCGCCGCTATAGCTTTCTTCCGATCTTTATAGCCCCAAAAAACCTCATATAAACCAGTATAATGTCCGAGAAATCAAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCC                                            <  SRR19973067.311070/150‑1 (MQ=60)
                                                                                                          TTACACTCCGATATAGCTTTCTACATATATTTATAGCCCCAAAAAACCTAATATAAATCAGTATAATGTCCGAGAAATCAAATTATCCCATCAATCAAAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCC                                            <  SRR19973067.311084/150‑1 (MQ=60)
                                                                                                             CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGA                                         >  SRR19973067.1033731/1‑150 (MQ=60)
                                                                                                               CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGT                                       >  SRR19973067.1463234/1‑150 (MQ=60)
                                                                                                                TCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTG                                      >  SRR19973067.2700342/1‑150 (MQ=60)
                                                                                                                 CCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGT                                     <  SRR19973067.3094552/150‑1 (MQ=60)
                                                                                                                 CCGATATAGATTTCTACATATATTTATAGCCCCCAAAAACCTCATTTAATTCAGGATAATGTCCGAGAAATCAAATTATCCAATCAATAATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGT                                     <  SRR19973067.3093348/150‑1 (MQ=60)
                                                                                                                   GCTATAGCTTTCTTCATATCTTTATAGCCCCAAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAA                                   <  SRR19973067.395057/150‑1 (MQ=60)
                                                                                                                   GCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAA                                   <  SRR19973067.2198671/150‑1 (MQ=60)
                                                                                                                        AGCTTTCTTCAGATCTTTATCCCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCAAATTACCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCT                              <  SRR19973067.621828/150‑1 (MQ=60)
                                                                                                                        AGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCT                              <  SRR19973067.1444257/150‑1 (MQ=60)
                                                                                                                             TCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAAC                         <  SRR19973067.271745/150‑1 (MQ=60)
                                                                                                                             TCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAAC                         <  SRR19973067.2079078/150‑1 (MQ=60)
                                                                                                                              CTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACG                        >  SRR19973067.3523122/1‑150 (MQ=60)
                                                                                                                                   GATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTC                   <  SRR19973067.1484142/150‑1 (MQ=60)
                                                                                                                                   GATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTC                   <  SRR19973067.1975937/150‑1 (MQ=60)
                                                                                                                                    ATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATACTGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCA                  <  SRR19973067.3149307/150‑1 (MQ=60)
                                                                                                                                    ATCTTTATAGCCCCCAAAAACCTCATATAAAACAGGATAATGTCCGAGAAAACCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCA                  <  SRR19973067.3149539/150‑1 (MQ=60)
                                                                                                                                     TCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCAT                 <  SRR19973067.3097192/150‑1 (MQ=60)
                                                                                                                                       TTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTT               <  SRR19973067.3450870/150‑1 (MQ=60)
                                                                                                                                         TATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTAT             <  SRR19973067.3246995/150‑1 (MQ=60)
                                                                                                                                          ATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATA            <  SRR19973067.3458337/150‑1 (MQ=60)
                                                                                                                                            AGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAAT          <  SRR19973067.452929/150‑1 (MQ=60)
                                                                                                                                            AGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAAT          <  SRR19973067.1801172/150‑1 (MQ=60)
                                                                                                                                               CCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCAT       <  SRR19973067.2175721/150‑1 (MQ=60)
                                                                                                                                               CCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCAT       >  SRR19973067.2010710/1‑150 (MQ=60)
                                                                                                                                               CCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCAT       <  SRR19973067.1779756/150‑1 (MQ=60)
                                                                                                                                                CCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC      <  SRR19973067.472923/150‑1 (MQ=60)
                                                                                                                                                CCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC      <  SRR19973067.2581588/150‑1 (MQ=60)
                                                                                                                                                  CAAAACCCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTCAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCC    <  SRR19973067.2653286/150‑1 (MQ=60)
                                                                                                                                                   AAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCT   <  SRR19973067.2763879/150‑1 (MQ=60)
                                                                                                                                                   AAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCT   <  SRR19973067.2735563/150‑1 (MQ=60)
                                                                                                                                                    AAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  <  SRR19973067.187578/150‑1 (MQ=60)
                                                                                                                                                    AAAACCTCATATAAAACAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  <  SRR19973067.1517801/150‑1 (MQ=60)
                                                                                                                                                     |                                                                                                                                                    
AATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  CP009273/2988206‑2988503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑