Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,988,355 C→A 100% pseudogene (97/633 nt) ygeK ← pseudogene; putative 2‑component transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,988,3550CA100.0% 612.7 / NA 196pseudogene (97/633 nt)ygeKpseudogene; putative 2‑component transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (86/110);  total (86/110)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.
Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch.

Only 100 of 203 total aligned reads displayed.

ATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC  >  CP009273/2988210‑2988499
                                                                                                                                                 |                                                                                                                                                
atatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaaaaa                                                                                                                                                <  1:370132/148‑1 (MQ=255)
atatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaaaaa                                                                                                                                                <  1:1503573/148‑1 (MQ=255)
atatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaaaaa                                                                                                                                                <  2:2333261/148‑1 (MQ=255)
 tatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCACATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCaaaaac                                                                                                                                               >  2:251471/1‑148 (MQ=255)
 tatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCaaaaac                                                                                                                                               >  2:2852293/1‑148 (MQ=255)
  atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTCCTTCAGATCTTTATAGCCCCCAAAAAcc                                                                                                                                              >  2:3344144/1‑148 (MQ=255)
     aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCa                                                                                                                                           <  1:2650648/148‑1 (MQ=255)
     aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCa                                                                                                                                           <  1:499517/148‑1 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      >  1:1440808/1‑148 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      >  1:1944113/1‑148 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      >  1:1846275/1‑148 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      <  2:1560038/148‑1 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      <  2:365147/148‑1 (MQ=255)
          ctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaa                                                                                                                                      <  2:944705/148‑1 (MQ=255)
           tatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATaaa                                                                                                                                     >  1:244923/1‑148 (MQ=255)
            atctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAAt                                                                                                                                    <  1:1492600/148‑1 (MQ=255)
             tctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATc                                                                                                                                   <  2:1190403/148‑1 (MQ=255)
                 aTGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGa                                                                                                                               <  2:250547/148‑1 (MQ=255)
                  tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGAt                                                                                                                              <  1:1716574/148‑1 (MQ=255)
                   gCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATa                                                                                                                             >  2:3219836/1‑148 (MQ=255)
                      aTTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATg                                                                                                                          >  1:2700384/1‑148 (MQ=255)
                      aTTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATg                                                                                                                          >  1:943279/1‑148 (MQ=255)
                       tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGt                                                                                                                         >  2:1734811/1‑148 (MQ=255)
                        ttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTc                                                                                                                        >  2:2493118/1‑148 (MQ=255)
                        ttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTc                                                                                                                        >  1:2754824/1‑148 (MQ=255)
                           aCCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTGCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCga                                                                                                                     >  1:3003554/1‑148 (MQ=255)
                              cATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGaa                                                                                                                  >  2:796751/1‑148 (MQ=255)
                                ttttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAAt                                                                                                                >  2:1022649/1‑148 (MQ=255)
                                ttttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAAt                                                                                                                >  2:1176195/1‑148 (MQ=255)
                                ttttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAAt                                                                                                                >  2:2925121/1‑148 (MQ=255)
                                 tttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATATCTTTCTTCAGATCTTTATAGCCCCCAAAAAGCTCATATAAATCAGGATAATGTCCGAGAAATc                                                                                                               >  1:599469/1‑148 (MQ=255)
                                    aCGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCaa                                                                                                            <  2:2771829/148‑1 (MQ=255)
                                    aCGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCaa                                                                                                            <  1:1552036/148‑1 (MQ=255)
                                    aCGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCaa                                                                                                            <  1:1809773/148‑1 (MQ=255)
                                        gTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTAt                                                                                                        <  2:661196/148‑1 (MQ=255)
                                         ttCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATc                                                                                                       >  1:1072753/1‑148 (MQ=255)
                                          tCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATcc                                                                                                      <  1:1174698/148‑1 (MQ=255)
                                                 ccATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCatcaat                                                                                               >  2:1756434/1‑148 (MQ=255)
                                                  catcatTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCatcaatc                                                                                              >  2:2789027/1‑148 (MQ=255)
                                                       ttCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                                                                                         <  2:1386758/148‑1 (MQ=255)
                                                         ccACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACGCTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCGCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACg                                                                                       >  1:3252375/1‑148 (MQ=255)
                                                          cACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACgg                                                                                      <  1:520699/148‑1 (MQ=255)
                                                                 aaaTTATCCTACAATAAATATTTTGTCTGTAGATTTGTTACACTACGATATAGCTTTCTTAAGATATTTATAGCCCCAAAAAACCTCAAATAAATCAGGATAATGTCCGAGAAATAAAATTATCCCATCAATCATAAACGgctgctta                                                                               <  2:2436450/148‑3 (MQ=255)
                                                                   aTTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATATTGTCCTAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATc                                                                             <  1:1355424/148‑1 (MQ=255)
                                                                    ttCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCt                                                                            >  1:3450130/1‑148 (MQ=255)
                                                                    ttCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCt                                                                            <  2:1799687/148‑1 (MQ=255)
                                                                     tctcCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTg                                                                           >  2:166845/1‑148 (MQ=255)
                                                                        caaaaaaTAAATATTTAGGCTTTTTTTTTTTTACACTCCTATATAGATTTCTTCATATATTTATACCCCCAAAAAACATCATAAAAATCAGTATAATGCCCGATAAATCCAATTATCCCATAAATCATAAACGGCTGCTGATCTGaaa                                                                        <  1:2373714/145‑1 (MQ=255)
                                                                          tAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACt                                                                      >  1:3384803/1‑148 (MQ=255)
                                                                           aaaaTAAATTTTTAGGCTGTATATTTGTTACACTCCGCTATAGATTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAAGGTCCGAGAAATCAAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTa                                                                     <  1:2667997/148‑1 (MQ=255)
                                                                             aataaataTTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACa                                                                   <  2:1067880/148‑1 (MQ=255)
                                                                              ataaataTTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaa                                                                  <  1:1469605/148‑1 (MQ=255)
                                                                              ataaataTTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaa                                                                  <  2:1268273/148‑1 (MQ=255)
                                                                               taaataTTTAGGCTTTATATTTTTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTAATATAAATCAGTATAATGTCCGATAAATCAAATTATCCCAAAAATCATAAACGGCTGCTGATCTGAAACTACaat                                                                 <  1:449185/148‑1 (MQ=255)
                                                                               taaataTTTAGGATGTATATTTGTTACACTCCGATATAGCTTTCTTCATATATTTATACCCCCAAAAAACCTCATATAAATCAGGATATTTTCCGAGAAATCAAATTATCCCAACAATCATAAACGGCTGCTGATCTGAAACTACaat                                                                 <  1:448823/148‑1 (MQ=255)
                                                                                  atatTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaatttt                                                              <  1:859255/148‑1 (MQ=255)
                                                                                  atatTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaatttt                                                              >  2:1284599/1‑148 (MQ=255)
                                                                                    atTTAGGCTGTAGATTTTTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaa                                                            <  2:1378006/148‑1 (MQ=255)
                                                                                    atTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaa                                                            >  1:2884201/1‑148 (MQ=255)
                                                                                      ttAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATATCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaatt                                                          >  2:268032/1‑148 (MQ=255)
                                                                                      ttAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaatt                                                          >  1:1151120/1‑148 (MQ=255)
                                                                                      ttAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaattttaatt                                                          >  1:1150022/1‑148 (MQ=255)
                                                                                          gCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTc                                                      >  1:3353201/1‑148 (MQ=255)
                                                                                            tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTccc                                                    <  1:1734811/148‑1 (MQ=255)
                                                                                             gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCa                                                   <  1:1102861/148‑1 (MQ=255)
                                                                                             gTAGATTTGTTACACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCa                                                   <  1:2854892/148‑1 (MQ=255)
                                                                                              tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCat                                                  >  2:2740135/1‑148 (MQ=255)
                                                                                                 aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCatata                                               >  1:2002291/1‑148 (MQ=255)
                                                                                                  tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCatatat                                              >  2:1767705/1‑148 (MQ=255)
                                                                                                  tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCatatat                                              <  1:847094/148‑1 (MQ=255)
                                                                                                  tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCatatat                                              <  2:2465990/148‑1 (MQ=255)
                                                                                                     gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCa                                           >  1:3191244/1‑148 (MQ=255)
                                                                                                       tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATc                                         <  1:3237995/148‑1 (MQ=255)
                                                                                                       tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATc                                         >  1:2305198/1‑148 (MQ=255)
                                                                                                       tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATc                                         >  2:1989735/1‑148 (MQ=255)
                                                                                                       tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATc                                         >  2:216552/1‑148 (MQ=255)
                                                                                                           cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCACCAAAAACCTAATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGa                                     <  2:140781/148‑1 (MQ=255)
                                                                                                            tCCGCTTTAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAg                                    <  1:251471/148‑1 (MQ=255)
                                                                                                            tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAg                                    >  2:1310505/1‑148 (MQ=255)
                                                                                                            tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAg                                    <  1:3152778/148‑1 (MQ=255)
                                                                                                             ccGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgt                                   >  2:66490/1‑148 (MQ=255)
                                                                                                             ccGATATAGCTTTCTTCATATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgt                                   <  1:3414838/148‑1 (MQ=255)
                                                                                                              cGCTATAGCTTTCTTCAGATCTGTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAgtg                                  <  2:3116660/148‑1 (MQ=255)
                                                                                                                 tataGCTTTCTTCATATCTTTATAGCCCCCAAAACCCTCATATAAATCAGTATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTaa                               <  1:5646/148‑1 (MQ=255)
                                                                                                                   taGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAAt                             >  2:1522915/1‑148 (MQ=255)
                                                                                                                      cTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCt                          >  1:1205712/1‑148 (MQ=255)
                                                                                                                       tttCATCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCtt                         <  2:1923139/148‑1 (MQ=255)
                                                                                                                         tcttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTa                       >  2:2577975/1‑148 (MQ=255)
                                                                                                                         tcttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTa                       >  2:818568/1‑148 (MQ=255)
                                                                                                                          cttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTaa                      <  2:2700384/148‑1 (MQ=255)
                                                                                                                          cttcAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTaa                      <  2:943279/148‑1 (MQ=255)
                                                                                                                                aTCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcatt                >  1:2942680/1‑148 (MQ=255)
                                                                                                                                 tCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattc               <  1:2502723/148‑1 (MQ=255)
                                                                                                                                 tCTTTATAGCCCCCAAAAACCTAATATAAATCAGGATAATGTCCGATAAATCCAATGATCCCATCAAACATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattc               <  1:1148772/148‑1 (MQ=255)
                                                                                                                                   tttATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattcat             <  2:3178569/148‑1 (MQ=255)
                                                                                                                                    ttATAGCCCCCAAAACCCTCATATAAATAAGGATAATGTCCGAGAAATCAAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattcatt            <  1:1742470/148‑1 (MQ=255)
                                                                                                                                    ttATAGCCCCAAAAACCCACATATAAATCAGGATAAGGTCCGATAAATCAAATTAACCCATCAATAATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGcattcatt            <  1:11396/148‑1 (MQ=255)
                                                                                                                                     tataGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCAttt           <  1:1064792/148‑1 (MQ=255)
                                                                                                                                         gCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATaa       <  2:3391644/148‑1 (MQ=255)
                                                                                                                                              caaaaaCCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAatcatc  <  1:1366755/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
ATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATC  >  CP009273/2988210‑2988499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  CP009273/2988208‑2988503
                                                                                                                                                   |                                                                                                                                                    
TAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAA                                                                                                                                                    <  SRR19973065.1235145/150‑1 (MQ=60)
  ATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACC                                                                                                                                                  <  SRR19973065.372728/150‑1 (MQ=60)
  ATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACC                                                                                                                                                  <  SRR19973065.1513307/150‑1 (MQ=60)
      GAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCAT                                                                                                                                              <  SRR19973065.292381/150‑1 (MQ=60)
       AGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATA                                                                                                                                             <  SRR19973065.502796/150‑1 (MQ=60)
       AGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATA                                                                                                                                             <  SRR19973065.502866/150‑1 (MQ=60)
       AGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATA                                                                                                                                             <  SRR19973065.2666994/150‑1 (MQ=60)
          ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973065.1956820/1‑150 (MQ=60)
          ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973065.1858441/1‑150 (MQ=60)
          ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973065.1450143/1‑150 (MQ=60)
          ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973065.1450626/1‑150 (MQ=60)
          ATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTACTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAA                                                                                                                                          >  SRR19973065.1858393/1‑150 (MQ=60)
           TCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAA                                                                                                                                         >  SRR19973065.246023/1‑150 (MQ=60)
           TCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAA                                                                                                                                         >  SRR19973065.246661/1‑150 (MQ=60)
              ATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCA                                                                                                                                      <  SRR19973065.1499694/150‑1 (MQ=60)
              ATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCA                                                                                                                                      <  SRR19973065.1502178/150‑1 (MQ=60)
                CTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGG                                                                                                                                    >  SRR19973065.1786574/1‑150 (MQ=60)
                  TATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGAT                                                                                                                                  >  SRR19973065.3453245/1‑150 (MQ=60)
                    TGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAA                                                                                                                                <  SRR19973065.1727984/150‑1 (MQ=60)
                      CGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATG                                                                                                                              >  SRR19973065.2717160/1‑150 (MQ=60)
                      CGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATG                                                                                                                              >  SRR19973065.949513/1‑150 (MQ=60)
                        ATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTC                                                                                                                            >  SRR19973065.2771962/1‑150 (MQ=60)
                           TAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTGCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGA                                                                                                                         >  SRR19973065.3021954/1‑150 (MQ=60)
                            AACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAG                                                                                                                        >  SRR19973065.1745911/1‑150 (MQ=60)
                                CATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGACCCCAAAAAACTCATATAAATCAGGATAATGTCCGAGAAAT                                                                                                                    >  SRR19973065.1752224/1‑150 (MQ=60)
                                 ATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATC                                                                                                                   >  SRR19973065.602831/1‑150 (MQ=60)
                                 ATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATC                                                                                                                   <  SRR19973065.2877928/150‑1 (MQ=60)
                                 ATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATATCTTTCTTCAGATCTTTATAGCCCCCAAAAAGCTCATATAAATCAGGATAATGTCCGAGAAATC                                                                                                                   >  SRR19973065.603208/1‑150 (MQ=60)
                                  TTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCC                                                                                                                  <  SRR19973065.2681245/150‑1 (MQ=60)
                                  TTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCC                                                                                                                  <  SRR19973065.3299134/150‑1 (MQ=60)
                                     TACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAACATAAATATTTAGGCTGTAGTTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAAT                                                                                                               <  SRR19973065.549267/150‑1 (MQ=60)
                                      ACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATT                                                                                                              <  SRR19973065.1821682/150‑1 (MQ=60)
                                      ACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATT                                                                                                              <  SRR19973065.1562319/150‑1 (MQ=60)
                                       CGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTA                                                                                                             >  SRR19973065.1531730/1‑150 (MQ=60)
                                         AGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC                                                                                                           >  SRR19973065.1079888/1‑150 (MQ=60)
                                         AGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC                                                                                                           >  SRR19973065.1079854/1‑150 (MQ=60)
                                          GTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC                                                                                                          <  SRR19973065.2524115/150‑1 (MQ=60)
                                            TCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAACTCAGGATAATGTCCGAGAAATCCAATTATCCCA                                                                                                        <  SRR19973065.1182165/150‑1 (MQ=60)
                                            TCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCA                                                                                                        <  SRR19973065.1182173/150‑1 (MQ=60)
                                             CGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCAT                                                                                                       <  SRR19973065.2708540/150‑1 (MQ=60)
                                              GGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATC                                                                                                      >  SRR19973065.3412389/1‑150 (MQ=60)
                                                   CCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCA                                                                                                 <  SRR19973065.3186275/150‑1 (MQ=60)
                                                    CATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCAT                                                                                                <  SRR19973065.386974/150‑1 (MQ=60)
                                                        ATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAAC                                                                                            <  SRR19973065.1203860/150‑1 (MQ=60)
                                                         TTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACGCTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCGCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACG                                                                                           >  SRR19973065.3272035/1‑150 (MQ=60)
                                                            CACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCT                                                                                        <  SRR19973065.524131/150‑1 (MQ=60)
                                                            CACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCT                                                                                        >  SRR19973065.2961662/1‑150 (MQ=60)
                                                                    AATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCT                                                                                >  SRR19973065.3471168/1‑150 (MQ=60)
                                                                    AATTCTCATAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCT                                                                                <  SRR19973065.2602234/150‑1 (MQ=60)
                                                                     ATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATATTGTCCTAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTG                                                                               <  SRR19973065.1364406/150‑1 (MQ=60)
                                                                          caaAAAATAAATATTTAGGCTTTTTTTTTTTTACACTCCTATATAGATTTCTTCATATATTTATACCCCCAAAAAACATCATAAAAATCAGTATAATGCCCGATAAATCCAATTATCCCATAAATCATAAACGGCTGCTGATCTGAAACT                                                                          <  SRR19973065.2388534/147‑1 (MQ=41)
                                                                          CCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACT                                                                          >  SRR19973065.3405500/1‑150 (MQ=60)
                                                                          CCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACT                                                                          >  SRR19973065.3405427/1‑150 (MQ=60)
                                                                            TAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTAC                                                                        >  SRR19973065.201236/1‑150 (MQ=60)
                                                                             AAAATAAATTTTTAGGCTGTATATTTGTTACACTCCGCTATAGATTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAAGGTCCGAGAAATCAAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTACA                                                                       <  SRR19973065.2684517/150‑1 (MQ=60)
                                                                                ATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATT                                                                    <  SRR19973065.1479027/150‑1 (MQ=60)
                                                                                 TAAATATTTAGGCTTTATATTTTTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTAATATAAATCAGTATAATGTCCGATAAATCAAATTATCCCAAAAATCATAAACGGCTGCTGATCTGAAACTACAATTT                                                                   <  SRR19973065.452302/150‑1 (MQ=60)
                                                                                 TAAATATTTAGGCTTTAGATTTGTTACACTCCGCTATCGCTTTCTTCAGATCTTTATAGCCCCCAAAACCCTCATATAAATCAGGATATTGTCCGAGAAATCCAATAATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTT                                                                   <  SRR19973065.452226/150‑1 (MQ=60)
                                                                                 TAAATATTTAGGATGTATATTTGTTACACTCCGATATAGCTTTCTTCATATATTTATACCCCCAAAAAACCTCATATAAATCAGGATATTTTCCGAGAAATCAAATTATCCCAACAATCATAAACGGCTGCTGATCTGAAACTACAATTT                                                                   <  SRR19973065.451938/150‑1 (MQ=60)
                                                                                  AAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTT                                                                  >  SRR19973065.3258190/1‑150 (MQ=60)
                                                                                   AATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTA                                                                 >  SRR19973065.935393/1‑150 (MQ=60)
                                                                                    ATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAA                                                                >  SRR19973065.2901844/1‑150 (MQ=60)
                                                                                    ATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAA                                                                <  SRR19973065.864794/150‑1 (MQ=60)
                                                                                      ATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              >  SRR19973065.1158532/1‑150 (MQ=60)
                                                                                      ATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              >  SRR19973065.1157554/1‑150 (MQ=60)
                                                                                      ATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATT                                                              >  SRR19973065.1157433/1‑150 (MQ=60)
                                                                                          AGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTC                                                          >  SRR19973065.3373691/1‑150 (MQ=60)
                                                                                           GGCTGTTGATTTTTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCC                                                         <  SRR19973065.1409751/150‑1 (MQ=60)
                                                                                           GGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCATATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATATTGTCCGATAAATCAAATTAGCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCC                                                         <  SRR19973065.2734582/150‑1 (MQ=60)
                                                                                           GGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATATTGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCC                                                         <  SRR19973065.510388/150‑1 (MQ=60)
                                                                                            GCTTTAGATTTGTTACACTCCGATATAGATTTCTTCAGATCTTTATAGCCCCAAAAAACATCATATAAATCAGTATATTGTCCGATAAATCCAATTATCCCATCAATAATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCC                                                        <  SRR19973065.695688/150‑1 (MQ=60)
                                                                                              TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCAT                                                      <  SRR19973065.1746291/150‑1 (MQ=60)
                                                                                              TGTAGATTTGTTACACTCCGATATAGATTTCTTCAGATATTTATAGCCCCCAAAAACCTAATATAAATCAGTATAATGTCCGAGAAATCAAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCAT                                                      <  SRR19973065.150684/150‑1 (MQ=60)
                                                                                               gtattTTTGTTACACTCCGCTATAGCTTTCTTCAGATATTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATA                                                     <  SRR19973065.2498751/145‑1 (MQ=60)
                                                                                               GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATA                                                     <  SRR19973065.1110105/150‑1 (MQ=60)
                                                                                               GTAGATTTGTTACACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATA                                                     <  SRR19973065.2872439/150‑1 (MQ=60)
                                                                                                 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATA                                                   >  SRR19973065.974699/1‑150 (MQ=60)
                                                                                                 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATA                                                   >  SRR19973065.2015244/1‑150 (MQ=60)
                                                                                                    TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTC                                                <  SRR19973065.852584/150‑1 (MQ=60)
                                                                                                     TTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCA                                               >  SRR19973065.3210493/1‑150 (MQ=60)
                                                                                                      TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCAT                                              >  SRR19973065.1075181/1‑150 (MQ=60)
                                                                                                       GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATC                                             >  SRR19973065.2319691/1‑150 (MQ=60)
                                                                                                         TACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCT                                           <  SRR19973065.3257493/150‑1 (MQ=60)
                                                                                                            ACTCCGATATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCAATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAG                                        <  SRR19973065.1934407/150‑1 (MQ=60)
                                                                                                              TCCGCTTTAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTG                                      <  SRR19973065.253229/150‑1 (MQ=60)
                                                                                                              TCCGCTATATCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATAAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTG                                      <  SRR19973065.3171634/150‑1 (MQ=60)
                                                                                                              TCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTG                                      <  SRR19973065.3171905/150‑1 (MQ=60)
                                                                                                              TCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTG                                      <  SRR19973065.3513147/150‑1 (MQ=60)
                                                                                                               CCGATATAGCTTTCTTCATATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGT                                     <  SRR19973065.3435703/150‑1 (MQ=60)
                                                                                                                CGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTA                                    >  SRR19973065.2351007/1‑150 (MQ=60)
                                                                                                                   TATAGCTTTCTTCATATCTTTATAGCCCCCAAAACCCTCATATAAATCAGTATAATGTCCGAGAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAAT                                 <  SRR19973065.5728/150‑1 (MQ=60)
                                                                                                                   TATAGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAAT                                 <  SRR19973065.2915328/150‑1 (MQ=60)
                                                                                                                      AGCTTTCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCT                              >  SRR19973065.1213470/1‑150 (MQ=60)
                                                                                                                           TCTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAAC                         >  SRR19973065.855498/1‑150 (MQ=60)
                                                                                                                            CTTCATATATTTATAGCCCCCAAAAACCACATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACG                        <  SRR19973065.1577010/150‑1 (MQ=60)
                                                                                                                            CTTCAGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACG                        >  SRR19973065.216549/1‑150 (MQ=60)
                                                                                                                                AGATCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATT                    >  SRR19973065.2960551/1‑150 (MQ=60)
                                                                                                                                   TCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCAT                 <  SRR19973065.2518451/150‑1 (MQ=60)
                                                                                                                                   TCTTTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCAT                 <  SRR19973065.1156181/150‑1 (MQ=60)
                                                                                                                                   TCTTTATAGCCCCCAAAAACCTAATATAAATCAGGATAATGTCCGATAAATCCAATGATCCCATCAAACATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCAT                 <  SRR19973065.1156175/150‑1 (MQ=60)
                                                                                                                                      TTATAGCCCCCAAACACCTCATATAAATCAGGATAATGTCCGACAAATCAAATTATCCCATCAAACAAACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTA              <  SRR19973065.11568/150‑1 (MQ=60)
                                                                                                                                      TTATAGCCCCCAAAACCCTCATATAAATAAGGATAATGTCCGAGAAATCAAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTA              <  SRR19973065.1753970/150‑1 (MQ=60)
                                                                                                                                      TTATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGATAAATCCAATTATCCCATCAATCATACACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTA              <  SRR19973065.11562/150‑1 (MQ=60)
                                                                                                                                      TTATAGCCCCAAAAACCCACATATAAATCAGGATAAGGTCCGATAAATCAAATTAACCCATCAATAATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTA              <  SRR19973065.11567/150‑1 (MQ=60)
                                                                                                                                       TATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTAT             <  SRR19973065.1071845/150‑1 (MQ=60)
                                                                                                                                        ATAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATA            >  SRR19973065.1365855/1‑150 (MQ=60)
                                                                                                                                         TAGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAA           <  SRR19973065.1317655/150‑1 (MQ=60)
                                                                                                                                          AGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAAT          <  SRR19973065.3239192/150‑1 (MQ=60)
                                                                                                                                          AGCCCCCAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAAT          <  SRR19973065.2869830/150‑1 (MQ=60)
                                                                                                                                                CAAAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCC    <  SRR19973065.1375789/150‑1 (MQ=60)
                                                                                                                                                  ACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  SRR19973065.78584/1‑150 (MQ=60)
                                                                                                                                                  ACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATGATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  SRR19973065.99442/1‑150 (MQ=60)
                                                                                                                                                  AAAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  <  SRR19973065.2883724/150‑1 (MQ=60)
                                                                                                                                                   |                                                                                                                                                    
TAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAATTTTAATTTTTCCCATATATTCATCCTGAGTGTAAATGCTTTAACGCATTCATTTATAATCATCCCTT  >  CP009273/2988208‑2988503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑