Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F9 I0 R1 103 124.7 2465218 97.5% 2403587 230.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,283,057 C→A 28.4% D297Y (GAT→TAT)  yejK ← spermidine nucleoid‑associated protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,283,0570CA28.4% 224.0 / 22.9 102D297Y (GAT→TAT) yejKspermidine nucleoid‑associated protein
Reads supporting (aligned to +/- strand):  ref base C (61/10);  new base A (2/28);  total (63/39)
Fisher's exact test for biased strand distribution p-value = 2.23e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

Only 100 of 109 total aligned reads displayed.

AAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGTTCTGTCGCT  >  NC_000913/2282819‑2283293
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCGGGATTACGTTATTGCTATTGTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGAATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAgcatcgcatc                                                                                                                                                                                                                                               <  1:1059470/239‑1 (MQ=255)
  aCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCaa                                                                                                                                                                                                                                             <  2:522759/239‑1 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCaaa                                                                                                                                                                                                                                            >  2:301441/1‑239 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCAACTAACAGCATCGCATCaaa                                                                                                                                                                                                                                            >  1:871066/1‑239 (MQ=255)
   ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGAGTTCAC‑GCCGCATCTGGCATTCAGCACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCaaa                                                                                                                                                                                                                                            >  2:75660/1‑239 (MQ=255)
      cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGtt                                                                                                                                                                                                                                         >  2:1091317/1‑239 (MQ=255)
      cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGtt                                                                                                                                                                                                                                         >  1:86120/1‑239 (MQ=255)
       gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑a                                                                                                                                                                                                                                       <  2:831725/239‑1 (MQ=255)
        cTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑aa                                                                                                                                                                                                                                      <  1:436747/239‑1 (MQ=255)
            ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTTCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTACGGCGCTGCAATTGGTCGCGCAAATTTGGCGGCGGGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGACGCTGGGTTCACCTAACAGCATCGCATAAACGTG‑AATAg                                                                                                                                                                                                                                   >  1:67524/1‑238 (MQ=255)
                   ttttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTTGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGACGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTT‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGcc                                                                                                                                                                                                                            >  1:1040143/1‑238 (MQ=255)
                           aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACcgccgc                                                                                                                                                                                                                    >  1:653065/1‑238 (MQ=255)
                           aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCt                                                                                                                                                                                                                   >  1:1136489/1‑239 (MQ=255)
                             cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCACATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAATCCACCGCCGCTa                                                                                                                                                                                                                  >  2:411035/1‑238 (MQ=255)
                             cTGCAGATTATGCCTGATTAAGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGACGATGCGTTCACCTAACAGCATAGCATAAAAGTT‑AATAGACAAGCCACCGCCGCTa                                                                                                                                                                                                                  >  1:458091/1‑238 (MQ=255)
                                        gCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTc                                                                                                                                                                                                      >  2:497668/1‑239 (MQ=255)
                                             aTTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCCCCGCCGCTACCGGCAAACTTCGTCa                                                                                                                                                                                                  >  1:208684/1‑238 (MQ=255)
                                             aTTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCa                                                                                                                                                                                                  >  2:1006479/1‑238 (MQ=255)
                                             aTTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCa                                                                                                                                                                                                  >  2:517874/1‑238 (MQ=255)
                                             aTTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCa                                                                                                                                                                                                  >  2:616024/1‑238 (MQ=255)
                                             aTTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCa                                                                                                                                                                                                  >  2:1051259/1‑238 (MQ=255)
                                              ttcggtttttGCTATTTTTTGCAGGCCAGATAGGGCTTTCCC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATGGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGAATAAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCaa                                                                                                                                                                                                 <  2:890362/230‑1 (MQ=255)
                                                   gTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGAc                                                                                                                                                                                            >  2:842866/1‑238 (MQ=255)
                                                     aTTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGAGTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGGCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCTGCTACCGGCAAACTTCGTCAACTGACGCa                                                                                                                                                                                         <  1:78527/239‑1 (MQ=255)
                                                      ttgcgtttttttTCAGGGCAAATAAAGGGTTCCCGGCCGCATCGGGAATTAAGAACCAAAACCCGATTAGTTGCCGCCAGACGCCGGGCGCGGCATTGGGTCGCGCAAATGCGGGGGCGTGC‑TTTT‑AATGGTA‑AAGGTAGCGGTGGCTGGACCCAAGAAGAGGCGTTCCCCTAACAGCATCGCAAAAAAGTA‑AATGGTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCa                                                                                                                                                                                         <  1:912254/233‑1 (MQ=255)
                                                      ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAg                                                                                                                                                                                        >  2:689933/1‑239 (MQ=255)
                                                      ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAg                                                                                                                                                                                        >  2:732645/1‑239 (MQ=255)
                                                       tGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAgt                                                                                                                                                                                       >  2:740610/1‑239 (MQ=255)
                                                       tGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAgt                                                                                                                                                                                       >  2:912254/1‑239 (MQ=255)
                                                        acTATTTTTTGAAGGCACGATAGGGCGACCCC‑GCCGCATCTGACATTCAAAACACAAAACTGATAAATTGCCGCCAGTCGCCCGGCGCTGCAATGGGTCGCGCAAATACGGGGGCGTGC‑CTTT‑AAGGGTC‑AAGGTTGCGGTTGCTGGATCCCGAAAGGTGCGTCCACAAAACGGCATCGCATCAAAGTA‑AAAGGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAgtg                                                                                                                                                                                      <  1:740610/238‑1 (MQ=255)
                                                         cTATTTTTTCCAGGCCAGATAATGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGCTTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTAGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGCTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCCTCCAAGTT‑ACTAGTAAAGCCACCGCCGCTACAGGGCAACTTCGTCAACTGACCAAgtgt                                                                                                                                                                                     >  1:916271/1‑239 (MQ=255)
                                                            ttttttGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAACGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGc                                                                                                                                                                                   >  1:614885/1‑238 (MQ=255)
                                                             gtttgGCGGGCCAGAAAGGGCGTACCC‑GCCGCTTCTGGCATTCAAAACACAAACCCGATTAATGCCCGCAAGCCGTCGGGGGCGGCAATGGGTCGCGCAAATCCGGCGGGGTGC‑TTTT‑AAGGGAC‑AAGGTAGCGTTTGCGGTATCCAAAAAGAGGCGTCCCCCTAACAGCACCGCAAAAAAGTA‑AATAGTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTa                                                                                                                                                                                 <  1:759586/238‑1 (MQ=255)
                                                              ttttGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTAc                                                                                                                                                                                >  1:210132/1‑239 (MQ=255)
                                                              ttttGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTAc                                                                                                                                                                                >  2:706729/1‑239 (MQ=255)
                                                                    aGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCt                                                                                                                                                                           >  2:1016921/1‑238 (MQ=255)
                                                                      gCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGcc                                                                                                                                                                        >  2:1040566/1‑239 (MQ=255)
                                                                           aTAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGCCGCAGTGTGCTACGGTCTCCCGGGa                                                                                                                                                                    >  1:732209/1‑238 (MQ=255)
                                                                           aTAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGAATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAACGTT‑AATAGTCAAACCACCGCCGCTACCGGCAAACTCCGTCAACTGACTCAGGGAGCTACGGTCTCCCGGGaa                                                                                                                                                                   >  1:825992/1‑239 (MQ=255)
                                                                              aGGCGTCCCC‑CCCGCATCGGGAATTAAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGAAAATTCGGGGGCGTGC‑CTTT‑AATGGTA‑AAGGTATCGGTTGCTGGACCCAAGAAGATGCGTTCCCCTAACAGCATCGCATAAAATTA‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAg                                                                                                                                                                  <  2:208684/237‑1 (MQ=255)
                                                                                gCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGctc                                                                                                                                                               >  2:519160/1‑238 (MQ=255)
                                                                                gCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGctc                                                                                                                                                               >  2:765816/1‑238 (MQ=255)
                                                                                gCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGctc                                                                                                                                                               >  2:820082/1‑238 (MQ=255)
                                                                                  gTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGCCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGACGTTGCGTCGCCCTAACAGCATCGCATCAAAGTT‑GATAGGCAAGCCACCCCCGCTACCGGCAAATCTCGTCAAGTGCCGAACGGTGCAACACTCTGCTCGGAAGctctct                                                                                                                                                            >  1:1055073/1‑239 (MQ=255)
                                                                                   ttCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGctctct                                                                                                                                                            >  2:849924/1‑238 (MQ=255)
                                                                                     cAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAACCTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTc                                                                                                                                                          >  2:818624/1‑238 (MQ=255)
                                                                                     cAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTcc                                                                                                                                                         >  2:1143645/1‑239 (MQ=255)
                                                                                            gtgtgtggctgtCAAAACACAAAACCTATTAAGTGCCGCCAGACGTCCGGCGCTGCATTTGGTCGCGAAAATTCGGGGGGGT‑C‑CTTT‑AAAGGTCAAAGGTATCGGTTGCTGGACCCAAGAAGAGGCGTCCCCCAAACAGCATCGCATAAAATTA‑AATAGCCAACCCCCCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCg                                                                                                                                                   <  1:487095/228‑1 (MQ=255)
                                                                                            gcATCTGGCTTTCAGAACAAAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTGGGCGGCGTGC‑TTTA‑AATGGTC‑AAGGTATGGGTTGCTGTATCCCAAAAGATGCGTTCACCTAACAGCATCGAATCAAAGTT‑AATAGTAAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCg                                                                                                                                                   <  2:923338/239‑1 (MQ=255)
                                                                                                       tCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTc                                                                                                                                        >  1:521877/1‑239 (MQ=255)
                                                                                                           aaCACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGcc                                                                                                                                    >  2:1190400/1‑239 (MQ=255)
                                                                                                           aaCACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGcc                                                                                                                                    >  2:271017/1‑239 (MQ=255)
                                                                                                             cacaAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCATCCGc                                                                                                                                  >  2:830203/1‑239 (MQ=255)
                                                                                                             cacaAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGAGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGc                                                                                                                                  >  2:649564/1‑239 (MQ=255)
                                                                                                             cacaAAACCGATTAATTGCCGCAAGGCGCCCGGCGCGGTAATGGTCCGCGCAAATTGGGGGGCGTCC‑GTTT‑AAGGGAC‑AGGGTGTGGGTTGCGGGTCCCAAGAAGGTGCGTTCCCCAAACAGCATCGAATAAAAGTT‑AAAAGTAAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGc                                                                                                                                  <  1:669343/239‑1 (MQ=255)
                                                                                                                  aaCCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAAc                                                                                                                              >  2:415134/1‑238 (MQ=255)
                                                                                                                       aTTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCACACTCCGTg                                                                                                                        >  1:1086174/1‑239 (MQ=255)
                                                                                                                            ttGCCGCCAGACGTCCGGCGCTGCAATGGGTCCCGCAAATTCGGCGGCGTCC‑TTTT‑AATGGTA‑AGGGTATCGGTTGCTGAACCCAAGAAGATGCGTTCACCTAACAGCACCGCATAAAATTA‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCt                                                                                                                   <  2:236137/239‑1 (MQ=255)
                                                                                                                                cgccAGACGTCCGGGGCTGAAATTGGTCGCGCAAATCCGGGGGCGTGC‑CTTT‑AATGGTA‑AAGGTATCGGTGGCTGGACCCAAAAAGATGCGTTCACCAAACAGCATCGCATAAAAGTA‑AATAGTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACt                                                                                                               <  2:580766/239‑1 (MQ=255)
                                                                                                                                          ccGGGGCTGCAATGGGTCGAG‑AAATTGGGGGGGCTACTCTTT‑ATTGAAC‑GCGGTATCGGTCGCTGTATCCCAGAAGGTGCTTTCACCTAACAGCATCTCATCAAAATT‑AATAGGCAATCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACg                                                                                                      <  1:323840/238‑1 (MQ=255)
                                                                                                                                                        ggTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGACGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTc                                                                                       >  2:1144837/1‑239 (MQ=255)
                                                                                                                                                           cgcgCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTACCAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCCGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTCCGCCTCCCAGCTCTTTCgc                                                                                     >  1:8386/1‑237 (MQ=255)
                                                                                                                                                             cgcAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAGACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACa                                                                                   >  2:240097/1‑238 (MQ=255)
                                                                                                                                                             cgcAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACa                                                                                   >  2:320904/1‑238 (MQ=255)
                                                                                                                                                              gcAACTTCGGCGGCGCGC‑CTTT‑AATGGTA‑AAGTTATCGGTTGCTGGACCCCAGAAGACGCTTTCACCTAACAACATCGCACAAAATTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAg                                                                                  <  1:890150/238‑1 (MQ=255)
                                                                                                                                                              gatatgtCGGGGGCGGGC‑TTTA‑AATGGTC‑AGGGTACGGGTTGCAGGACCCAAGAAGAGGCTTCCCCCTACCAGAATCGAATAAAAGTA‑AATAGCAAAGCAACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAg                                                                                  <  1:217797/232‑1 (MQ=255)
                                                                                                                                                                   tccgggggCGTGC‑CTTT‑AATGGTC‑AAGGTATGGGTTGGTGGACCCCAGAAGATGCGTTCCCCTAACAGCACCCCATAAAAGTT‑AATAGTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGAttt                                                                            <  1:842866/237‑1 (MQ=255)
                                                                                                                                                                   acgcgggggttGC‑CTTTCACTGGTC‑AAGTTATCGTTTGATGGACCACAGAAATTGGGGAAACATAAAGACATCTAACTAAAGTA‑AATACTCAACCCACCGCCGCTACCGGCAAACTTCGGCATCTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTCTCGACAGCGAtt                                                                             <  1:75660/229‑1 (MQ=255)
                                                                                                                                                                        gggggggttctttaaagggTC‑AAGGTACCGTTGACGGGACCCAAGAAGATGCTTTCACTTAACAGCATCACATAAAAGTT‑AATAGACAGCCCCCCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAg                                                                         <  1:271017/222‑1 (MQ=255)
                                                                                                                                                                                      aaTGGTG‑AAGGTATCGGTGTCTGGATCCCACAAGTTGCGTCCCCCCAACAGCACCCCAAAAAAGTT‑AATAGTAAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCgc                                                           <  1:706729/239‑1 (MQ=255)
                                                                                                                                                                                           tC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCgcctg                                                        >  2:190982/1‑237 (MQ=255)
                                                                                                                                                                                           tC‑AAGGTATCGGTTGCTGGAGCCCAGAAGATGCTTCCACCAAACAGCACCGCATAAAATTA‑AATAGACAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCgcctgcc                                                      <  1:497668/239‑1 (MQ=255)
                                                                                                                                                                                            c‑AAGGTATCGTTTGCGGGATCCCAGAAGATGCTTCCCCCTACCAGCATCGCATAAAAGTT‑AATATTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCgcctgcc                                                      <  2:1136489/238‑1 (MQ=255)
                                                                                                                                                                                               aGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCctgcctgc                                                   >  2:1168368/1‑239 (MQ=255)
                                                                                                                                                                                                  atggggTTGCTGGACCCAAGAAGGTCCTTTCCCATAACAGCATCACACAAAATTA‑AATAGCCAGCCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAg                                                 <  1:517874/234‑1 (MQ=255)
                                                                                                                                                                                                    tgggTTGCTGGATCCCAGAAGAGGCTTTCCCCAAACAGCACCGCAAAAAAGTA‑AATAGCCAGCCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAgctg                                              <  2:614885/237‑1 (MQ=255)
                                                                                                                                                                                                    ccGGTGGCTGACTCCCAGAAGAGGCGTTCCCCTAACCACCCCGTACAAAATTG‑AATATCCAGGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAgctg                                              <  2:67524/238‑1 (MQ=255)
                                                                                                                                                                                                     cGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGCTCTCTTCGCCTGCCTGCAgct                                               >  2:460053/1‑237 (MQ=255)
                                                                                                                                                                                                     cGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAgctg                                              >  2:764983/1‑238 (MQ=255)
                                                                                                                                                                                                          gCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTAACGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTACAGTTCGTAGCCTTTTTTAGCCGCACACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCAtt                                        >  2:1047281/1‑239 (MQ=255)
                                                                                                                                                                                                            tGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTa                                       >  1:308941/1‑238 (MQ=255)
                                                                                                                                                                                                               ctCCAAGAAGATGCGTCCACCTAACAGCATCGCATAAAAGTA‑AATAGCCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAg                                    <  2:86120/237‑1 (MQ=255)
                                                                                                                                                                                                               cccccaaagtagggctctaCCTAACACAACCGCAAAAAAGAT‑AGTAGTAAAGCCAGCGCCGGTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCGCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  1:320904/221‑1 (MQ=255)
                                                                                                                                                                                                               accaaaaaggttaccttCCCCTACCACCATCGAACAAAATTT‑AGAAGGAAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  1:1144837/224‑1 (MQ=255)
                                                                                                                                                                                                               acacgaaaagaCGCGTTCACCAAACAGCACCGCACAAAAGTA‑AAAAGTAAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAg                                    <  2:871066/231‑1 (MQ=255)
                                                                                                                                                                                                                tccaaaaagaTGCTTTCACCTACCAGCACCCAAAAAAAGTA‑AAAAGCCAACCCCCCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  1:415134/232‑1 (MQ=255)
                                                                                                                                                                                                                tcacAGAAGATGCGTCCCCCAAAGAGCACCTCATCAAAGTA‑AATAATAACCCCCCCGCCGCTACCGGCAAACTGCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCACAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  2:825992/235‑1 (MQ=255)
                                                                                                                                                                                                                tCCAAGAAGATGTGTTCCCCTAACAGCACCGC‑TAAAAGTTAAAGCGGCAGCCCCCCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  1:689933/238‑1 (MQ=255)
                                                                                                                                                                                                                ccccaaagaatgcctcccccaaaCAGCATCGCATCAAAGTT‑AACAGTCAACCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  1:1143645/217‑1 (MQ=255)
                                                                                                                                                                                                                ccccAGAAGTCGCGTTCCCCTAAAAGCCCCGCACAAAAGTT‑AAAAGTAAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGt                                   <  2:653065/237‑1 (MQ=255)
                                                                                                                                                                                                                      aagaTGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCtata                            >  2:898254/1‑239 (MQ=255)
                                                                                                                                                                                                                          tGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATaaa                          >  2:1120261/1‑237 (MQ=255)
                                                                                                                                                                                                                           gCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATaaa                          >  1:691393/1‑236 (MQ=255)
                                                                                                                                                                                                                              ttCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACct                       >  2:1223252/1‑236 (MQ=255)
                                                                                                                                                                                                                                      aCAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTAACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACg            >  2:765275/1‑239 (MQ=255)
                                                                                                                                                                                                                                           atcgcatcAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGCCAGCGATTTCAGTTCGATCTCTTCGCCTGCCTTCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt           >  1:643483/1‑235 (MQ=255)
                                                                                                                                                                                                                                           atcgcatcAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGt           >  2:350287/1‑235 (MQ=255)
                                                                                                                                                                                                                                            tcgcatcAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCGTTACAGTAGCTATAAACCTGCTGGCGCACGt           >  1:1184617/1‑234 (MQ=255)
                                                                                                                                                                                                                                             cgcatcAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGTTCTGTc     >  2:51381/1‑239 (MQ=255)
                                                                                                                                                                                                                                                atcAATATT‑AATAGGAAACCCACCGCCGCTACCGGCAAACCTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCACACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGTTCTGTCGct  <  2:428742/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                             
AAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAC‑GCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGC‑CTTT‑AATGGTC‑AAGGTATCGGTTGCTGGATCCCAGAAGATGCGTTCACCTAACAGCATCGCATCAAAGTT‑AATAGTCAAGCCACCGCCGCTACCGGCAAACTTCGTCAACTGACGCAGTGTGCTACGGTCTGCCGGGAAGCTCTCTTCCAGTTCGTAGCCTTTTTCAGCCGCAAACTCCGTGAAGCTCACTTCGCTTACGCCTGCCAGCTCTTTCGACAGCGATTTCAGTTCGATCTCTTCGCCTGCCTGCAGCTGCTCATTACAGTAGCTATAAACCTGCTGGCGCACGTTCTGTCGCT  >  NC_000913/2282819‑2283293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A