Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F18 I0 R1	274	115.5	2655328	86.7%	2302169	226.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	2,274,347	T→G	24.0%	G57G (GGT→GGG)	yejB →	microcin C ABC transporter permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,274,347	0	T	G	24.0%	136.3 / 9.9	84	G57G (GGT→GGG)	yejB	microcin C ABC transporter permease
Reads supporting (aligned to +/- strand): ref base T (12/47); new base G (22/2); total (35/49)
Fisher's exact test for biased strand distribution p-value = 1.44e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCG  >  NC_000913/2274116‑2274578

cTGGAGGCATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGAGCTTACCTGATTCGCCGTCTGTTGC‑TAGTGATCCCAACCTTATGGGCGCTTATAACCCTCAACTTTTTCATAGT‑GCAAATAGCTCCTGTCCGTCCGGTCGTCCAGGCCATAGCCGCCATTGAGTTGGGGAATGCCGGTGGATTACCCGGCGCGGGGGGGGCAGGGGTTGGTg                                                                                                                                                                                                                                      >  1:278070/1‑239 (MQ=255)

   gtggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGGTTCGTtcc                                                                                                                                                                                                                                    >  2:704503/1‑238 (MQ=255)

       tATGACGTAAATAAGGCGGCCAATCTGCCGTCCGACAGCAAACAGGGAGAGTAGATGGGCGCTTACCTTGTTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTgccagcc                                                                                                                                                                                                                                <  2:661172/238‑1 (MQ=255)

             gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTTACGGTGTTCGTgccagcccttccca                                                                                                                                                                                                                         >  2:896181/1‑232 (MQ=255)

                aaaaaaGCGGCCAAACTGCCGGCCGCCAGCAAACGGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCa‑aa                                                                                                                                                                                                                     <  2:1253719/235‑1 (MQ=255)

                aaTAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGGTTCGTGCCCGCCATG‑CGGA‑AAc                                                                                                                                                                                                                    >  2:987549/1‑239 (MQ=255)

                        ggCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGgtgt                                                                                                                                                                                                              <  2:815667/237‑1 (MQ=255)

                         gccaacctccgccccGCCAGACAAAGGGGGGAGTAGTTGGGGTGTTACCTGCTTCCCCGTTTGTTGC‑GGGTGATCCCAAAATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCgg                                                                                                                                                                                                           <  1:127450/226‑1 (MQ=255)

                         gCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACACTCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCCGCGCGGGCGGGGACAGGGTTTGTGCCCACCCGG‑CCCA‑AACggggggggg                                                                                                                                                                                                           >  1:686225/1‑233 (MQ=255)

                                tGCCTTCCCCCATGAAATGGGGAGAGTGGTTGGGTGGTTTCTGGTGTCCCCGCCTGTTGG‑TGGTGAGCCAAACATTGTGGGCGATTATCCCCACCAACTTTTTCATCGT‑GCAAATTGCGGCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATc                                                                                                                                                                                                    <  1:72678/239‑1 (MQ=255)

                                      ccGCCAGCAAACCGGGAGGGTGGTGGGTCGTTTACCGGATTCGCCGTCGTTTGC‑GGGTGATCCCAACATTAGGGGCGATTATCCCCATCAACTTTTTCAGCGT‑GAAAATTGCGCGTGGCGGCCCGGTCGACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGAc                                                                                                                                                                                              <  1:849411/239‑1 (MQ=255)

                                       cGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCCGCCATG‑CGCA‑AACGGGTGTCGGCAAATTCAGCGACa                                                                                                                                                                                             >  2:271997/1‑239 (MQ=255)

                                                    ggAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGAc                                                                                                                                                                                              <  2:732806/225‑1 (MQ=255)

                                                          tAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAAAATAAGCGCAAGTAATTACCGGGGGGG‑Acc                                                                                                                                                                         >  2:477530/1‑238 (MQ=255)

                                                              tGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGGAGGGGTTCGTGCCAGCCAGG‑CCCA‑AACGGGGGCCGGCAAAATCAGCGAAGGTAATAAcccccgctcctaaaaa                                                                                                                                                                      >  1:732806/1‑225 (MQ=255)

                                                              tGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAATATCGACGACAGTAATTACCGTGGCGG‑GCTCGGa                                                                                                                                                                     >  2:1026462/1‑239 (MQ=255)

                                                               gggCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCTCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAAATACCGTTGCgggaccgggt                                                                                                                                                                     >  2:467923/1‑231 (MQ=255)

                                                                tttaaggaCCAGATTCGCCGTTTTTTGT‑TGGTGATCCCAACATTATGGGCGGTTTTCCCCATCAACTTTTTCATCGT‑GGAAATGGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  1:601743/232‑1 (MQ=255)

                                                                gggagatgtgtataagagaaggtGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCGTCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:939187/217‑1 (MQ=255)

                                                                 tggtttACTTGAGTCGCCGTTTGTTTT‑TGTTGACCCCAAGTTTATGGGCGATTCTCACCCTAAATTGTTGCACCGT‑GAAAGTTGCGCCTGGCGGACGGGGCGACCCGGACGTGGGCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGTCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  1:467923/234‑1 (MQ=255)

                                                                 ggctttgccTTATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTAGGGGCGATTATCCCCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:853258/231‑1 (MQ=255)

                                                                 gcgcTTCCCTGATTCCCCGTTGGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:450024/238‑1 (MQ=255)

                                                                 gcgcTTACCTGATTCGCCGTCTTTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:446076/238‑1 (MQ=255)

                                                                 gcgcTTACCTGATTCGCCGTCTGTTGC‑TGGGGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:894825/238‑1 (MQ=255)

                                                                 gccgttACCTGATTCGCCGTCTGTTGT‑TGGTGATCCCAACCTGGGGGGCGGTTACCACCGCCACCTTTTTCCTCGA‑GCAAGTTGCGCCTGGCGGGCCGGTCGACCCGGCCATGGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  1:546306/234‑1 (MQ=255)

                                                                 gccgttACCTGACTCCCCGTTGTTTGCGTGGT‑ATCCAAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGAtt                                                                                                                                                                   <  2:652595/234‑1 (MQ=255)

                                                                  cgcTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGGTTAg                                                                                                                                                                 >  2:1298160/1‑239 (MQ=255)

                                                                  cgcTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCACAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AAAGGGGGTAGGCAATATCAGTGACAGTAATTACCGTGGCGG‑AGCCGGATTAg                                                                                                                                                                 >  2:417609/1‑239 (MQ=255)

                                                                    cTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGGA‑AACGGGGGTCGGCAATATCAGGGCCAGTAATTACCGTGGCGG‑ACGCGGGtttaa                                                                                                                                                                >  2:3993/1‑235 (MQ=255)

                                                                    cTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGAGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCACTATAAGCGACAGTAATTACCGGGGCGG‑GCGCGGATTAGa                                                                                                                                                                >  2:1205749/1‑238 (MQ=255)

                                                                     ttcccTGATTCGCCGTCTTTGGG‑TGTGGATCCAAACATTAGGGGCGATTACCTCCATCAACTTTTTCAGCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATc                                                                                                                                                              <  1:764591/236‑1 (MQ=255)

                                                                       aCCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCGCAGGCGGCGCAGGGGTTCGTGCCCCCCATG‑GGCA‑AACGGGGGTCTGCAACATCACCGGCGAGAATTACCCGGGCGT‑Accgcgggtgaaccaa                                                                                                                                                            >  1:330797/1‑225 (MQ=255)

                                                                            aTTCCCCTTCTGTTGC‑TTGTGATCCCAACATTGTGGGCGATTATCACCATCAACTTTTTCCTGGT‑GCAAATTGCGCCTGGCGTTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGTAGTATTACCCGGCGCAGGCGGTTAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGt                                                                                                                                                       <  2:842975/239‑1 (MQ=255)

                                                                             ttCGCCGTTTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGt                                                                                                                                                       <  2:449112/238‑1 (MQ=255)

                                                                                 ccttttGTTGG‑TGGTGCACCCAACTTTTGGGGGGTTTACCCCCTTCAACTTTTTCCCCGG‑GAAAATTGCGCCTGGCGGTCCGGTCTCCCAGGCCATCGCCGCCATTGATTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCg                                                                                                                                                  <  1:271997/234‑1 (MQ=255)

                                                                                 ccGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑GGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACCCGGCTTAGAACCAGAAGGGATc                                                                                                                                                   >  2:332888/1‑238 (MQ=255)

                                                                                  ctgttGTTGC‑TGGTGTTCCCAACATTATGGGCAATTATCCCCATCAACTTTTTCACTGT‑GAAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGc                                                                                                                                                 <  1:293864/235‑1 (MQ=255)

                                                                                      tGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGGGGGTTAGATCCAGAAGTGaacccttgg                                                                                                                                             >  2:928738/1‑231 (MQ=255)

                                                                                      tGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGCCAGTAATTACCGTGGCGG‑ACCCGGATTAGATCCAGAAAGGATCGCTgag                                                                                                                                             >  2:360408/1‑239 (MQ=255)

                                                                                       gTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACCCGGGTTAGATCCACAAgcgggctctttta                                                                                                                                            >  2:601743/1‑227 (MQ=255)

                                                                                            ttgggtctccccaattggtGGGCGGTTGACACCGTCATGTTTTGCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCGGGCCTGCGCCGCCATTGAGTTTGGTCACGCCGGAGTATTGCCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATAGCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCAc                                                                                                                                        <  1:987549/221‑1 (MQ=255)

                                                                                                 gATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGCGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGTGGG‑AAGCGGATTAGATCCCGaaagggaagcggggataaccccca                                                                                                                                   >  1:857914/1‑217 (MQ=255)

                                                                                                    cccAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑Acg                                                                                                                                                                         <  2:194794/198‑1 (MQ=255)

                                                                                                     ccAACATTAGGGGCGATTAACCCCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTa                                                                                                                               <  2:482938/239‑1 (MQ=255)

                                                                                                              tGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAAAATCAGCGACAGTAATTACCGGGGCGG‑ACACGGGTTAGATCCAGAAAGGATGCCTTGAATCACTCATCGCTACGGTTTTgc                                                                                                                      >  2:387325/1‑238 (MQ=255)

                                                                                                                    aTTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGGGGCGG‑ACGCGGGTTAGATCCAAAAGGGATCGCTGAGATCACCCATCGCTCCGGGTTTGTTAAGcc                                                                                                                >  2:1105421/1‑239 (MQ=255)

                                                                                                                         ccccATCAATTTTTTCA‑CGTGGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATcc                                                                                                          <  2:437610/237‑1 (MQ=255)

                                                                                                                               cAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑GGCA‑AACGGGTGCGGGGCGTATCAGCGGCAGTAAATCCCGGGGCGGCCCGCGG‑GTAAATCGAGAAGACATATCGGAGATCACACATCGCCCCCGTTTTgtcaatagcacccacgaac                                                                                                     >  1:989843/1‑221 (MQ=255)

                                                                                                                                 aCTTTTTCATCGG‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGt                                                                                                  <  2:1304740/239‑1 (MQ=255)

                                                                                                                                            gT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATAGCCGTCATTGAGTTTGGTAATGCAGGAGTCTTCCCCGGCGCAGGCGGATAAGGGTTTCCTGCCAGCCCTG‑GGTA‑AACGGGGGTAGGCAAGTTCAGCCAGCGAAATTACCCATGCGG‑ACGCGGAGGCGCTCACGAAGTGATGGCTGAGGACACCCCATGCCACGGGCTTTTAAAGCCG‑ACCCACGAAAGTTACTAGaaaaa                                                                                       >  1:473465/1‑238 (MQ=255)

                                                                                                                                            cggcctattgtcccttGGGGGCCCGGTTGCCCAGGCAATCGCCGCCCATGAGTTTGGGAAGGCCGGAGTATTCCCGGGCGCAGGCGGTGAAGGTGTTCGGCCCAGCCATG‑CGCA‑AACGGGTGTCGGAAATATCAGCGACAGTAATTACCGTGGCTG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCaaaa                                                                                        <  1:1205749/224‑1 (MQ=255)

                                                                                                                                                  ttttGCGCTGGGCGGTCGGGTGGCCCCGGCCCTCTGCGCCATTGGGTTTGGTAATGCCGGAGTATTACCCGGCGCCGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                  <  1:649200/237‑1 (MQ=255)

                                                                                                                                                  atttGCGCCTGGGGGCGCGGTCGCCCAGGCCATCGCCGCCTTTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGGGAAGGTGTTCGTGCCAGCCATG‑GGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                  <  1:1298160/237‑1 (MQ=255)

                                                                                                                                                  aaTTGCGCCTGGCGGGCCGGTCCACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                  <  2:686225/239‑1 (MQ=255)

                                                                                                                                                            ggCGGTCCGGTCGACCGGGCCATCGCCGGCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCTACGAACGTTACTTCAAAATGCTCTGGGACTACAt                                                                        <  2:330797/239‑1 (MQ=255)

                                                                                                                                                             gCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGTAGGTGTTCGTGCCCGCCATG‑CGCA‑AAAAGGTGTCGGCAATATCAGCGACAGGAATTACCGTTGGGG‑AGCCGGAGTTAATCCAGAAGAGATTCCGGGAATCCCCTCTTGCCACGGGTTTTGTAAACCGAATCCCCCAAGTTTACTTAAAAATCCTCTgggcacacc                                                                         >  1:761571/1‑232 (MQ=255)

                                                                                                                                                                  ccgggcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCt                                                                   <  2:324715/238‑1 (MQ=255)

                                                                                                                                                                               gcctccccggcATTGGGTTTGGTAATGGCGGGGTTTTACCCGGCGGAGGCGGTGAAGGTGTTCGTGCCAGCCAGG‑CGCA‑AACGGGTGTCGGCAATATCAGTGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGa                                                      <  1:1026462/232‑1 (MQ=255)

                                                                                                                                                                                            tgggTTTTGTAATGGCGGAGTATTACCCGGCGGAGGCGGGTAAGGTGTTCGTGCCCGCCATG‑CGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCa                                        <  2:393425/236‑1 (MQ=255)

                                                                                                                                                                                                tttGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGGGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTAATTCAAAATGCCCTGGGGCTACATCCGCTTTGATTTTTGCGATAGCCCGttttccaggg                                     >  2:362316/1‑231 (MQ=255)

                                                                                                                                                                                                 ttGGTAATGCCGGAGTATTACCCGGCACAGGCGGTGAAGGTGGTCGTGCCAGGCACG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAgcgc                                    <  2:553818/238‑1 (MQ=255)

                                                                                                                                                                                                   ggtaagtgcGGGGTATTTCCCGGCGCCGGGGGTGAAGGTGTTCGTGGCAGCCATG‑GGCA‑AACGGGTTTCGGCAATAGCAGCGACAGTAATTTCCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTc                                 <  1:477530/231‑1 (MQ=255)

                                                                                                                                                                                                   ggTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACg                                                                                                       >  2:1101601/1‑169 (MQ=255)

                                                                                                                                                                                                   ggTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACg                                                                                                       <  1:1101601/169‑1 (MQ=255)

                                                                                                                                                                                                   ggTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCCAAAGTGATCGCTGAGATCACTCATCGCTACCGGTTTTATAAACCC‑AGTCCCGAACGTTACTTTCAAATGCCCTGGGGCTTCATCCGCTTTTGTTTTTGCGGTAACCTTTTTCGCacggcccc                                 >  1:762154/1‑232 (MQ=255)

                                                                                                                                                                                                          ccGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTTGCGCCAGCCCAG‑TGCA‑ACCGGGCGGCGGCAATATCAGCGGAAGGAATTACCGTGGAGG‑ACGAGCGTTTCAGCCAGAAGTTATCGCTGAGATCACTCAGTGCAACGGGTTTGGTAAGACG‑GTCCACAACTATGACTGACAAATTCTCTGGGACTACATCAGCTTAGATTTTGGCGTCAGCCCGttcttcatcacgtagggccg                           >  1:1326546/1‑220 (MQ=255)

                                                                                                                                                                                                          ccGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGGGACAGTAATTACCGTGGCGG‑ACGCGGGTTAGATCCCGAAGGGATCCCTGGGATCACTCATCCCTTCGGGTTTTATTAACCG‑ATCCCCGAACGTTACTTACAAATGCCCTGGGACTCCATCCCCTTTGATTTTGGCGATAGCCCTTTTTGCCGCCCCCCGGGGccg                          >  1:1096181/1‑237 (MQ=255)

                                                                                                                                                                                                              ggtttgtagaagagacagCGGTGGAGGGTGTCGTGCCAGCCCTG‑‑GCACAACGGGTGTCGGGAATAGCAGGGACAGTAATTACCGGTGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCGGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  1:862901/222‑1 (MQ=255)

                                                                                                                                                                                                              aggtgttcccGGGGCAGGCGGTGAAGGTGTTCGTGCCAGCCAGG‑CGCA‑AACGGGTTTCGGAAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACg                       <  2:730678/231‑1 (MQ=255)

                                                                                                                                                                                                               tgtttccccGGCGCAGGCGGGTAAGGTGTTCGTGCCCGCCATGCCGCA‑AGGGGGT‑TAGGCTATTACTGGGACAGGATTTTCCGTGGCGG‑ACGCTGATTAGATCCGGAAGTGAACGCTGAGATCACTAATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTGCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  1:417609/232‑1 (MQ=255)

                                                                                                                                                                                                               gttttccccgggccgggCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAAATGCAGCGACAGTAATTCCCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  1:387325/223‑1 (MQ=255)

                                                                                                                                                                                                               gtggtccccgggtgggggggTGAAGGTGGTCGGGCCAGCCATG‑CGCA‑TACTGGTGGCGGCAATATCGGCGGCATGAATTTCCGGGGCGG‑ATGCGGATTAGATCCATAAGTGATCGGTGAGATCTCTCATCGCTTCGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  1:236673/220‑1 (MQ=255)

                                                                                                                                                                                                               ggtttACCCGGCCCAGGCGGTGAAGTTGTTCGTGCCAGCACTG‑CCAA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  2:548567/235‑1 (MQ=255)

                                                                                                                                                                                                               gTATTCCCCGGCGCAGGCGGTGAAGGTTTTCGGGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  2:849480/238‑1 (MQ=255)

                                                                                                                                                                                                               gTATTACCCGGGGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTGATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  2:79217/238‑1 (MQ=255)

                                                                                                                                                                                                               gTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  2:857914/238‑1 (MQ=255)

                                                                                                                                                                                                               gTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                      <  2:1096181/238‑1 (MQ=255)

                                                                                                                                                                                                               gTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGGTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATTGCCTGTTTTGCAGCGCCTCGGTGCTGAc                        >  2:827975/1‑236 (MQ=255)

                                                                                                                                                                                                                  ttACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCCCGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCCCGGGGCTGCCCCTGAt                  >  2:1104209/1‑239 (MQ=255)

                                                                                                                                                                                                                          cgcAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑Acgc                                                                                                                                                                        >  2:412431/1‑82 (MQ=255)

                                                                                                                                                                                                                          cgcAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑Acgc                                                                                                                                                                        <  1:412431/82‑1 (MQ=255)

                                                                                                                                                                                                                          cgcAGGCGGTGAAGGGGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGACGGCAATATCAGCGACAGTAATTACCGCGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTTGCGATAGCCTGTTTCTCAGCGCCTCGGGGCTGACGCTGATTAAAGAcc          >  2:98334/1‑238 (MQ=255)

                                                                                                                                                                                                                          cgcAGGCGGTGAAGGGGGTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGGGGCAGGAATTACCGTGGCGG‑ACCCGGGTTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAACCC‑GTCCCCGAACGTTTCTTACAAATGCTCTGGGACGAAATCCGCTTTTATTTTTGCGAGATCCCGTTTCGCCGCGCCCCGgtggtgggcctggataaaaaca          >  1:1200381/1‑223 (MQ=255)

                                                                                                                                                                                                                                   tGAAGGTTTTCGGGCCATCCATG‑GGCA‑AATGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATGAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCg  <  1:928738/238‑1 (MQ=255)

CTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGC‑TGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGT‑GCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATG‑CGCA‑AACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGG‑ACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCG  >  NC_000913/2274116‑2274578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A