Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,274,347 T→G 24.8% G57G (GGT→GGG)  yejB → microcin C ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,274,3470TG24.8% 139.8 / 14.3 84G57G (GGT→GGG) yejBmicrocin C ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base T (18/42);  new base G (22/2);  total (40/44)
Fisher's exact test for biased strand distribution p-value = 3.01e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCC  >  NC_000913/2274113‑2274584
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                
acccTGGGGGTAGGACGTCAATAAAGCGGCCAACCGGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGtt                                                                                                                                                                                                                                               <  1:643300/236‑1 (MQ=255)
    tggtggTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGTGAAGGGGtttggtc                                                                                                                                                                                                                                          >  1:535882/1‑234 (MQ=255)
    gggggggtggccatCAAAAAGGCCGCCAACGTGGCGGCCGCCAGCAAAAGGGGAGAGTGGATGGTCGTTTTCCTGGTTCGCCGTATGTTGCGGGTGATCCCAACATTATGGGCCATTATCCCCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTgc                                                                                                                                                                                                                                          <  2:377732/226‑1 (MQ=255)
      gtggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGGAAGGGTTTCGTgcc                                                                                                                                                                                                                                         >  1:934641/1‑238 (MQ=255)
      gtggtATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGTTTACCCGGCGCAGCCGGGGAAAGGGTTCGGgcga                                                                                                                                                                                                                                        >  2:261104/1‑237 (MQ=255)
          tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGCCCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCCCGGGGGGGGAAGGGGTTCGGggcagc‑cc                                                                                                                                                                                                                                   >  2:284657/1‑238 (MQ=255)
          tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGGGAAGGGTGTCGGgccacc‑ca                                                                                                                                                                                                                                   >  1:319779/1‑239 (MQ=255)
            tGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTAAGTTTGGGATTGCCGGGGAATTACCCGGCGCAGGCGGTGAAGGGGTTCGGgcccgc‑cagg                                                                                                                                                                                                                                 >  2:570086/1‑237 (MQ=255)
                gTCAATAAAGCTGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGCAATGCCGGGGTATTACCCGGCGCAGGCGGTGAAGGGTGTCGTgcccggcacgacca                                                                                                                                                                                                                              >  1:480170/1‑228 (MQ=255)
                gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGTTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAAGGCCGGAGAATTACCCGGGGCAGGCGGTGAAGGGGTGCGTGCCAGC‑CATGCGCa                                                                                                                                                                                                                             >  1:118184/1‑239 (MQ=255)
                gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGCGTATTACCCGGCGCAGGCGGGGAAGGGGTTTGGGCCCGC‑CATggcca                                                                                                                                                                                                                             >  1:369472/1‑235 (MQ=255)
                gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCa                                                                                                                                                                                                                             >  1:190821/1‑239 (MQ=255)
                    aTAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCCCAGGCGGTGAAGGTGTTCGGGCCAGC‑CATGCGCaaaag                                                                                                                                                                                                                         >  1:683531/1‑237 (MQ=255)
                            gCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CCGGACCAAACGGgggtat                                                                                                                                                                                                                  >  1:719339/1‑236 (MQ=255)
                            gCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGCCGCAGGCGGGGAAGGGGTTCGTTCCAGC‑CATGACCAAACGGGTGTCg                                                                                                                                                                                                                  >  1:512385/1‑238 (MQ=255)
                             ccAAACTACCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGAggcggc                                                                                                                                                                                                                >  1:337722/1‑239 (MQ=255)
                                      cGTCCGCCAGCAAACGGGGGGAGTAGTTGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACTTTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAg                                                                                                                                                                                                        <  2:512385/238‑1 (MQ=255)
                                         cccccggCAAAGGGGGAGTGGAGATGGGCGCTTACCTGATTCGCGGTCTGGTGCGGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTGCATCGTGCAAATGGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGAc                                                                                                                                                                                                    <  2:727503/233‑1 (MQ=255)
                                         ccGCCAGCAAACAGGGGGGTGAGATGGGCGTTTACCTGATTCGCCTTCTGTTTCTGGGCGTCCCAACCTTATGGGCGATTATCCCCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGGGGTCCGGTCGACCAGGCCACCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGAc                                                                                                                                                                                                    <  2:49215/239‑1 (MQ=255)
                                         ccGCCAGCAAACAGGGAAAGTAGAGTGGCTCTTACCTGATTCGCCGTCTTTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGa                                                                                                                                                                                                     <  1:78684/238‑1 (MQ=255)
                                                       ggAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCCGGCGGTGAAGGGGTTCGGTCCAGC‑CATGCGCCAACGGGGGGTGGCAAAATCACGGACAGGAATTTCCGTgg                                                                                                                                                                                      >  1:1011819/1‑239 (MQ=255)
                                                         agagTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGGGTATTACCCGGCGCAGGCGGGGAAGGGGTTCTGGCCAGC‑CCTGCGCAAAAGGGGGTGGGCCATATCAGGGACAGTAATTTCCATGGCg                                                                                                                                                                                    >  1:70584/1‑239 (MQ=255)
                                                          gagTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGGGTCGGCAATTTCAGCGCCAGTAATTACCATGGCgg                                                                                                                                                                                   >  1:640738/1‑239 (MQ=255)
                                                              ggATGGGGGCTTCCCTTATCCCCCGTCTGTTGTGTGTGATCCCAACATTGGGGGCGATTACCCCCATCAAC‑TTTTTCATCGTGCAAATGGCGCCTGGCGGTCCGGTCGCCCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg                                                                                                                                                                                <  2:735191/237‑1 (MQ=255)
                                                              atgtGGGCTTTTACCTGATTCGCCTTCTGTTGCTGGGTACCCCAAAATTAGGGGCGATTTCCACCATCAAC‑TTTTTCCTCGTGCAAATTGCGCCTGGGGGGCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGAcg                                                                                                                                                                                <  2:169632/235‑1 (MQ=255)
                                                               gATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGCGTATTACCCGGCGCAGGCGGGGAAGGGGTTCGGGGCCGC‑CCTGCGCAAACGGGGGTCGGCAATATCAGGGACGGGAATTACCCTGGCGGAagcg                                                                                                                                                                              >  1:488522/1‑239 (MQ=255)
                                                               gATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CCTGGGCAAACGGGGGTCGGCAAAATAAGCGACAGTAATTACCGgggggggacgg                                                                                                                                                                              >  2:927980/1‑234 (MQ=255)
                                                                 tGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGGAGGTGTTCGTGCCAGC‑CATGGGCAACCGGGTGGCGGCAATATTAGCGCCAGGAATTTCCGGCGCGGAcggcgg                                                                                                                                                                            >  1:400046/1‑235 (MQ=255)
                                                                   gggctttACCTGTTTCGCCTTTTGTTGCTGGTGACCCCAACATTAGGGGCGATTACCCCCATCAAC‑TTTTTCAGCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt                                                                                                                                                                          <  2:934641/234‑1 (MQ=255)
                                                                    gcccTTACCGGATTCCGCGTCTGGTGGTGGGGATCCCAACATTATGGGCGATTATCACCAGCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGAtt                                                                                                                                                                          <  1:992711/235‑1 (MQ=255)
                                                                     cgcTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACCGGTGTCGGGAATATACACGACAGGAATTACCGTGGGGGGCCCgggatag                                                                                                                                                                        >  2:49567/1‑234 (MQ=255)
                                                                       cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGGCAGTAATTACCGGGGGGGACGCGGGTTTGa                                                                                                                                                                       >  1:735191/1‑238 (MQ=255)
                                                                       cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAAAATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGCCGCAGGCGGTGGAGGGGTTAGGGCCAGCGCAAG‑GCAAAATGGGGGGGGCAAAATCAGCGACATGAAATAccagtggggaggaggagtagaa                                                                                                                                                                      >  2:187196/1‑219 (MQ=255)
                                                                            ccttttctccttttttttcTGGTTATCCAACCTTTGGGGGCGTTTATCACCCACCAC‑TTTTTCATCGTGGAAATTGCCCCGGGGGGTCCGGGCGACCAGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGa                                                                                                                                                                 <  2:337722/221‑1 (MQ=255)
                                                                                 tCGCCTTCTGTTGCGGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGa                                                                                                                                                            <  1:284657/239‑1 (MQ=255)
                                                                                  cgcgtttttttgctgtggtccccAACATTGTGGGCGATTTCCTCCATCAAG‑TTTTTCATCGTGCAAATTGCGCCGGGCGGCCCGGTCGCCCTGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGAt                                                                                                                                                           <  2:155292/219‑1 (MQ=255)
                                                                                   cgggtttgttgttgtGGATCCCAACATT‑TGGGGGGTTTTACCCCACAACTTTTTTCACGGGGAAATTTGCGCCGGGGGGTCCGGTCGCCCGGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATc                                                                                                                                                          <  2:1064000/233‑1 (MQ=255)
                                                                                      ttttttttcTGTTGATCCCAAAATTAGGGGCGATTACCCCCATCAAC‑TTTTTCATCGTGCAAATTGGGCCTGGCGGCCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCt                                                                                                                                                       <  2:190821/231‑1 (MQ=255)
                                                                                      gttgtgttttGGTGATCCCAACTTTATGGGCGATTATCCCCATCACC‑TTTGTCATCGTGAAAATTGCGCCTGGGGGTCCGGTCGGCCCGGCCAGCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCt                                                                                                                                                       <  2:480170/230‑1 (MQ=255)
                                                                                                 gTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTAACGTGGCGGACGCGGGTTCGAGTCAGAAGGGATcccgtggataa                                                                                                                                                >  1:1064000/1‑225 (MQ=255)
                                                                                                 gTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGAGTCGGCAATATCAGCGGCAGGAATTACCGTGGGGGACCCGGGTTAAATCCAGAAgccggtccttatacccatc                                                                                                                                             >  1:745821/1‑220 (MQ=255)
                                                                                                      ccgaaCATTATGGGCGATTATCTCCATCAAC‑TTTTTCTTCGTGCAAATTGCGCCTGGCGGTCCGGCCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAACGTGTTCGTGCCATC‑CATGCGCAAACGGGTGTCGGCAATATCAg                                                                                                                                                                                                        <  1:359259/171‑1 (MQ=255)
                                                                                                       ccAACATTATGGGCGTATATCCCCATCAAC‑TTTTTCCTCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑a                                                                                                                                     <  1:105652/239‑1 (MQ=255)
                                                                                                                tGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTAGATCCCAAAGTGATCGCGTGGATCACTccacccctcgggtttgt                                                                                                                             >  1:615075/1‑223 (MQ=255)
                                                                                                                tGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATAAGCGCCAGTAATTACCGGGGCGGACCCGGGTTAGATCCAGAAGGGATCGGTTGGATCCACCAACGCT‑ACGGGTTTgg                                                                                                                            >  1:1023512/1‑238 (MQ=255)
                                                                                                                     tcttttccccATAAAT‑TTTTTCATCTGGAAAATGGGGCCGGGCGGTCCGTGCGCCCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAg                                                                                                                        <  2:932694/230‑1 (MQ=255)
                                                                                                                     gATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCg                                                                                                                                                                                                      >  1:197081/1‑161 (MQ=255)
                                                                                                                     gATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCg                                                                                                                                                                                                      <  2:197081/161‑1 (MQ=255)
                                                                                                                                    c‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGa                                                                                                                                                                                                     <  1:465087/147‑1 (MQ=255)
                                                                                                                                      ttttcgagcGTGCAATTGGGGCGTGGCGGTCCGGGCGACCCGGCCATGGCCGACTTTGAGTTTGGTAATGCCGGAGTATTACCCGGCCCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTa                                                                                                      <  2:10668/231‑1 (MQ=255)
                                                                                                                                               gTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTAGATCCAGAAGGGATCGCTGAGATCCCTCATCGCT‑ACCGGTTTTATAAGCCG‑ATCCACGAACGTTACTTCaaaa                                                                                              >  1:847846/1‑238 (MQ=255)
                                                                                                                                               gTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGGTAGTGCCAGC‑CATGCGCAAACGGGTGGCGGCAAACTCAGGGACAGTAATTACCGTGGGCGAACCGGGTTAGAGACCAAAGTGATCGCTGGCATAACACGTCGCTCGCGGTTTT‑ATAAGCCG‑AACCACGaaacgtcgttaaaaag                                                                                             >  2:715239/1‑225 (MQ=255)
                                                                                                                                                tGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCCAACGGGTGTCGGCAATATCAGCGGCCGTAATTAACGGGGCGGGCGGCGGTTAGATCCAGAAGGGATACCTGTGATACCCCCTCCCT‑ACGGGTTTTATAAACCGCATCC‑CGCACGTTTCTTCaaaaa                                                                                             >  2:245730/1‑237 (MQ=255)
                                                                                                                                                    tttttcgcgtggaccgtggttcGACCCGGCGAGCGCTGCCTTTGAGTTTGGTAAGTCCGGAGTATTACCCGGCGCGGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAACCGGGTGTCGGCATTATCAGCGACAGTAATTACCGTGGCGGACGCGGATTCGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                        <  2:119792/219‑1 (MQ=255)
                                                                                                                                                    aaTTGCGGCTGGGGTTCCGTTCGACCGGGTACGCGCCGCCATGGAGTTTGGTAATGCCGGAGGATTGCCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                        <  2:734814/239‑1 (MQ=255)
                                                                                                                                                    aaTTGCGCCTGGCGGGCCGGTCGACCAGGCATTCCGCGGCATTGAGTTGGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTTAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctc                                                                                         <  1:898633/238‑1 (MQ=255)
                                                                                                                                                    aaTTCCGCCTGGCGGTCCGGTTGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGAAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                        <  1:808671/239‑1 (MQ=255)
                                                                                                                                                    aaTGGCGCCTGGCGGTCCGGGCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGctct                                                                                        <  1:334780/239‑1 (MQ=255)
                                                                                                                                                                cggtccggtcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGATTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATc                                                                             <  1:880054/238‑1 (MQ=255)
                                                                                                                                                                                tccATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCg                                                             <  1:458332/237‑1 (MQ=255)
                                                                                                                                                                                  cttccccgccATGGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGGGGTTAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACCATAATTACCGTTGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTGGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATa                                                          <  2:1009381/234‑1 (MQ=255)
                                                                                                                                                                                  aagcgccgcCATTGAGTTTGGTAATGCCGGATTATGACCCGGCGCAGGCGGTGAAGGTGTTCTTGCCCGC‑CATGCGCAAACGGGTTGCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTGTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATa                                                          <  1:902679/236‑1 (MQ=255)
                                                                                                                                                                                          ccATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAGACGGGGGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAAAAGTGATCGCTGAGATCACTCATCGCT‑ACGGGTTTGTTAAGCCG‑ATCCACGAACGGTACTTCCAAATGCTCTGGGACTCCATCCCCTTTGATTTTGGCGATAGCCTGtt                                                   >  2:421883/1‑238 (MQ=255)
                                                                                                                                                                                           cATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGGTTTGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGGTTTGGTAAACCG‑ATCCACGAACGTTTCTTCAAAATGCCCTGGGGCTACCTCCCCTTTTAtttttgggaaaacccttttt                                                 >  2:914454/1‑223 (MQ=255)
                                                                                                                                                                                              tGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCCAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCCCa                                              >  1:921623/1‑239 (MQ=255)
                                                                                                                                                                                              gtggTTTTGTAATGGCGGAGTATTTCCCGGCGCAGGCGGTGAAGGTGTGCGGTCCCGC‑CATGCGCAAAAGGGTGACGGCAATATCAGGGACAGTAATTACCGTGGCGGACGCGGTTTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCa                                              <  2:719339/236‑1 (MQ=255)
                                                                                                                                                                                               gggTTTGGTAATGCCGGAGTTTTACCCGGCGCGGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAg                                             <  2:488522/237‑1 (MQ=255)
                                                                                                                                                                                               gAGTTTGGTTATGCCGGGGTATTACCCGGCGCGGGCGGTTAAGGTGTTCGGGCCAGC‑CATGCGCAAACGGGTGTCGGCAATAGCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAg                                             <  2:319779/239‑1 (MQ=255)
                                                                                                                                                                                                    tGGTAATGGCGGAGTATTTCCCGGGGGAGGCGGTTAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGGAATATCAGCGACAGTAATTGCCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCt                                        <  1:582097/239‑1 (MQ=255)
                                                                                                                                                                                                               gggttttACCCGGGGCCGGGGGTGAAGGTGTGCGTGCCCGC‑CGTGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACg                             <  2:650862/234‑1 (MQ=255)
                                                                                                                                                                                                               gAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACCGTAATTACCGTGGCGGACGCGGGTTTGGTCCAGAAGGGATCGCTGGGATCACTCATCGCT‑ACGGGTTTGATAAGCCG‑ATCCACGAACCGTACCTCAAAATGCTCTGGGGCTAAATCCGCCTTTGTTTTGGCGCTGACCTGTTTTCCAGGGCCCCGGGGCTggc                              >  2:135032/1‑236 (MQ=255)
                                                                                                                                                                                                                aGTATTCCCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACg                                                                                                             <  1:611198/158‑1 (MQ=255)
                                                                                                                                                                                                                aGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAACGACACGGTGCTGAc                              >  1:373009/1‑237 (MQ=255)
                                                                                                                                                                                                                 gttttccccGGGGCGGGGGGTGAAGGTGTTCGGGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                            <  2:746617/232‑1 (MQ=255)
                                                                                                                                                                                                                 gTATTTCCCGGCGCAGGCGGTGAAGGTGTTCGGGCCAGG‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                            <  1:570086/238‑1 (MQ=255)
                                                                                                                                                                                                                 gTATTACCCGGCGCCGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc                            <  1:809064/238‑1 (MQ=255)
                                                                                                                                                                                                                     tACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGa                                                                                                                                                                                                     >  2:471596/1‑67 (MQ=255)
                                                                                                                                                                                                                     tACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGa                                                                                                                                                                                                     <  1:471596/67‑1 (MQ=255)
                                                                                                                                                                                                                            cgcAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGGGGCGGACGCGGATTAGATCCAGAAGGGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGGGATAGCCCGTTTTGCAGGGCCCCGGGGCGGACGCTGATTTAAGACa                >  1:144607/1‑239 (MQ=255)
                                                                                                                                                                                                                            cgcAGGCGGTGAAGGGGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACCCGGGTTAGATCCAGAAGTGATCCCTGAGATCACCCATCGCT‑ACGGGTTTGATAAGCCG‑ATCCACCAACGTTACTTCAAAATGCCCTTGGACTAACTCCGCTTTGTTTTTTGCGGAAGCCCGTTTTCCACGGCCCCGGTGCTGACGCCGTTTaaaaaaa                >  2:72009/1‑235 (MQ=255)
                                                                                                                                                                                                                            cgcAGGCGGAGAAGGGGGTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGCCGCGGATTAGATCCAGAAGTGATCGCTGAGATTCATCAACGCT‑ACGGTTTTGAAAAACCG‑AATCACGAACCGTACTTCAAAAAGCGTTTGGACTACACCCGCCTTGATTTTTGTGATAAACCGTTTCTCGCGGCCCCCGTGCTGAGGCTGATTAAAAACa                >  2:834264/1‑239 (MQ=255)
                                                                                                                                                                                                                                  cGGGGAAGGTGTTCGTGCCAGC‑CCTGCCCAAACGGATTTCGGCAATATCAGCGACAGTAATTACCGGGGCGGACGCGGATTAGAGCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTg           <  2:369472/238‑1 (MQ=255)
                                                                                                                                                                                                                                   ggTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGc          <  1:730400/238‑1 (MQ=255)
                                                                                                                                                                                                                                     tGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCg        <  1:772572/238‑1 (MQ=255)
                                                                                                                                                                                                                                           tgtTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTcc  >  1:85701/1‑238 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                
TACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAAC‑TTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGC‑CATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCT‑ACGGTTTTGATAAGCCG‑ATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCC  >  NC_000913/2274113‑2274584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A