Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F2 I0 R1
|
88 |
153.3 |
2661736 |
98.2% |
2613824 |
271.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,708,930 |
C→A |
8.2% |
P671Q (CCG→CAG) |
rsxC → |
SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,708,930 | 0 | C | A | 8.2%
| 271.1
/ 2.4
| 107 | P671Q (CCG→CAG) | rsxC | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (43/53); new base A (3/8); total (46/61) |
| Fisher's exact test for biased strand distribution p-value = 3.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 |
Only 100 of 107 total aligned reads displayed.
CTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTT > NC_000913/1708645‑1709215
|
gtaagggggAACAAGGACAAGTGGTGGAACCGCGCAAAGCTGGCGTCGAAGCCGCTATAGCCCGGGACAAAGCGCGCAAGCGTGAAGAGCAACAGGTTAAGGCGGAACCAGAAGAACTGGCTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATGGCCCGCGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCgg < 2:1106107/281‑1 (MQ=14)
aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAAGAACAGGTCGACCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGC‑AAACAGGAACAGCAACAGGCTAATGCCGCGCCAGAACAACAGGTCGATCCGGCCAAAGCCGCCGCCGAAGCCGCTCTTGCCCGGGCCAAAGCGGGCAAACGGGAACAGCAAACGGcaacagccgg > 2:245389/1‑280 (MQ=14)
tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGTCTAAAGCGGACCCAGAAGAACAGGTGGa > 1:1194965/1‑288 (MQ=255)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGGCAGAAGAACAGGATGATCcgc > 1:199729/1‑288 (MQ=255)
cgTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGAGCAAGGCCACCGGACAAGCCGCCAATGCCCGCGCCAAAGCCCGCAAACCGGAACAGCAACCGGCCAATGCGGAGCCagccgaaaatgccgatccggccaacagcgc > 2:748446/1‑260 (MQ=14)
aGCCGCTATTGCTCGAGCTAAAGCGCGCAAGCGGAAACAGCAACAGGCTAATGAGGAACCAGAAGAACAGGTCGATCCGCGCAAAGTCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGa < 1:90040/288‑1 (MQ=255)
tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGGACCAGAAGAACGGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCCAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGAGCCAAAGCGCGCAAACGGTAACAGCAACCGGCTAATCCGGATCAAGAAGAACAGGTTGATCCGCGCAAAGCTGCGGTCGAAGCGGCT‑ATTGCAcgg > 1:466440/1‑288 (MQ=17)
tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGTAGCGGCT‑ATTGCAcgc > 1:1135392/1‑289 (MQ=255)
tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCCcgc > 1:789420/1‑289 (MQ=255)
tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCAcg > 1:1126332/1‑288 (MQ=255)
cgCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATACGCGCAAAGCCGCCGTCGAAGCCGCTATTCCCCGACCCCAAGCGCGCAAACGGGCACAGCAATCGGCTAATGCGGAGCCCGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCCAACCTGCT‑ATTGCCcgc > 1:13897/2‑289 (MQ=14)
gCCAAAGCGCGCAAGCTGGACCAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTCACCGATCCAAAGCGCGCAAACGGGCACAGCCACCGGCTAATGCGGCGCCAGAAGCACAGGTTGCTCCGCGCACAGCTGCCGTCGACGCTGCT‑ATTTCAcgc > 1:681425/1‑288 (MQ=14)
aGCGCGCAAGCGGGAACAGCAACAGGCTAAGGCGGAAACAGAAGAACAGGTCGACCAGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCaaa < 1:402940/289‑1 (MQ=255)
cgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGTACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCCCGTGCCCAAGCGCACAAACTGGAACAGCAACAGGCGAATGCGGTACCCGACGAACAGGTTGATCCGCACAAAGCTGCCGTCTAAGCGGGT‑ATTGCACGCGCCAAAGCa > 2:770421/1‑288 (MQ=11)
gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCgg < 1:1308047/222‑1 (MQ=255)
gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCgg > 2:1308047/1‑222 (MQ=255)
aagtcggAAAAGCAACAGACTAATGCGAAACCTGAAGAGCAGGCCATCCCGCGCAAAGCCGCCTTCGAATCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCa < 1:1096053/284‑1 (MQ=17)
aaGCGGGGACAGCAAACGGCTAATGCGGACCCAGAAGAATGGGTCGATCCGCGCAAAGCGGCCGGCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCGAATGCCGCGCCAGAACAACAGGTCGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGTAGCGGCT‑ATTGCACGCGCCAAAGCACGCa < 2:1135392/289‑1 (MQ=255)
aCAGCAACAGGCTAATGCGGAACCAGCAAAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCGATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGaa < 1:242712/289‑1 (MQ=255)
aCAGGCTAATGCGGACCCAGAACCACGGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGC‑AAGCTGGAACAGCAACAGGCTAATGCGAAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa < 1:937542/289‑1 (MQ=255)
aCAGGCTAATACGGAACCAGAAGACCAGGGCGACCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCAAAATCACAC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa < 1:533020/289‑1 (MQ=255)
gtgaagcagAACCAGAAGAAGGGGACGTGCGGCGAGAAGCTGGCATCAAACACGCTATTGCCCGTGCCACAACACGC‑AAGCTGGAACAGCAACAGGCGAATGCCAGACCAGAACAACAGGTCGCACCGCGAAAAGCGGCCGGCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACa < 2:1126332/278‑1 (MQ=255)
tAATGCGGAACCAGGAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCt < 1:280639/289‑1 (MQ=255)
tAATGCGGAACCAGAAGAGCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc < 1:748446/288‑1 (MQ=255)
aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAACGCGAACAGCAGCCGGCTAATGCGGAGGAAGAAGAACAAGTTGATACGCCCAAAGCCGACGTTAAAGCGGCTCATCGC‑CGCTCCAAAGCGATCAAACTGGagctacaaacggcaat > 2:213875/1‑274 (MQ=14)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGCACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCCAATGCGGt > 1:935847/1‑289 (MQ=255)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCCATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAACGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCgg > 1:68108/1‑288 (MQ=255)
cagcagAACAAGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTAcc < 1:133369/289‑1 (MQ=255)
cgcAAAGCCGCCGTCGAAGCCGCTATTGCACGTGCAAAAGCACGA‑AAGCTGGAACAGCAACCGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAAGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTTCAGTCGAAGCGGCT‑CTTGCAAGCGCCAACGCAAGCAAGCTGGAACAGCAACAGGCTACAGCGGTCCCAGACGAAAAgatcaaaccgc > 1:534181/1‑279 (MQ=17)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAGCCCCGCAAAGCGGCCGTCGAACCGGAT‑ATTTCCCGCGCCCACGGACGCAACGTGGGACAAGCACAGGATAATGCGGTaagctaagaaacgcttcatccga > 2:405909/1‑266 (MQ=17)
ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCgga > 1:276206/1‑288 (MQ=255)
ccgccTAATGCCCAAGCGAAGGCGCGC‑AAGCTGGAACAGGAACATGCTAAAGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCcg < 1:593213/285‑1 (MQ=17)
cccGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGCAAAGCGGCAGTTGCCGCGGCTATTg > 1:807328/1‑288 (MQ=255)
ccGTTCCAAAGAACGCGTAGC‑GGAACAACAAGAGGACAAAGCGAAGACAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGTCCAAAGCACGCAAACGGGAACAGCAACCGGCTAATGCGGAGAGAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGcc < 2:1194965/289‑1 (MQ=17)
cGTGCCAAAGCACGC‑AAGCTGGAATAGCAACAGGCGAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGACGCCGACGCTGCCGCCATTGCCCGAGCCACAGCCCGCAAACGGGCACAGCAACCGGCGAATGCGGATCAGGAAGAACGGGTTGATCCGCGCAAAGCTGACGTCGAAGCGGCT‑CTTGCCAGTGCCAAAGCACTCACGCTTGCACAGGAACAGGCCCAGCCGGTACCGGAAGAAAAGGTGGATCAGGACACAGCGGCAGTTGccatgactcatgac > 2:1299217/1‑276 (MQ=255)
cGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt > 1:50285/1‑159 (MQ=255)
cGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt < 2:50285/159‑1 (MQ=255)
gTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAACGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATACGGAGCCAGAAGAACAGGTTGATCCGCGCAACGCTGCCGCCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTCATGCGGTACACGAAGAACAGGTTGATCCGCGCAATGCGGCAGTTCACGCGGCTACTGctc > 2:424877/1‑286 (MQ=255)
gTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCCGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTACTGCGGTACCAGAAGAACAGGTCAATCCGCGCAAAGCGGCTGTTTCCGCGGCTCttcgcg > 2:25571/1‑284 (MQ=255)
tGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCC‑ATTGCACGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCCCCAAGCGGCAGTTCCCGCGGCTATTTCCcgg > 2:589544/1‑288 (MQ=255)
gCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAAAGGGCACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAACCACGCACGCTGGCAGAGCCACAGGCCAATGCGGTACCAGAAGAAAAGGTACGTCCGCGCAAAGCGGACGTCGGCGCGGCTGATGccccc > 2:210957/1‑286 (MQ=17)
cAAAGGACGC‑AAGCTGGAACAGCAACAGGCTACTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt < 1:351319/289‑1 (MQ=255)
cAAAGCACGC‑AAGCTGGAACAGCAACCGGCTAATGCAGAGCCAGAACAACAGGTCGGTCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt < 1:581182/289‑1 (MQ=255)
cAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt < 1:963214/289‑1 (MQ=255)
cAAAGCACCG‑AAGACGGACCAGCAACAGCATAATGGCGAGCCACAACAACAGGTCGGTCCGAGCAATGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt < 2:807328/289‑1 (MQ=18)
cAAAGCACCC‑AAGCGGGAACAGCAACAGGCTAATGCCGAGCCAAAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCt < 1:696118/289‑1 (MQ=255)
ggAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCACAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCCAAGCCCGCAAACTGGAACAGCAAAAGGATAAAGCGGTAACAGAAGAACAGGTTGAAACGAGACAAACCGCAGCTGACGAGGGCATTGCACGCGGCCAGGGCaaaaaacac > 2:219574/1‑286 (MQ=14)
aaCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAgccg < 1:770421/288‑1 (MQ=255)
acaacaacaGGCTAATGCCGAGCCAGAACAACAGGTCAAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAgccgcc < 1:81951/289‑1 (MQ=255)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCCGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGAACCGCGAAACTACGCAGTTGCCGCGGCTATGGCCCGGGCCCAGGCCAAAACACCCGCCcaca > 2:1131753/1‑287 (MQ=18)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCcagc > 1:732448/1‑289 (MQ=255)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGATCAGGCCAAAAAAGCCGCCcagc > 1:1248670/1‑289 (MQ=255)
gCTAATGCCGAGCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAgccg < 1:477399/277‑1 (MQ=255)
cgaaTGCCGCGCCAGAACACCAGGTCGATCCGCGCAAAACCGCCGTCAAAGCCGCTATTGCCCGACCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACTGGTTGATCCGTGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGaa < 1:99710/284‑1 (MQ=255)
aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAAAAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGAGGCCGTTGCCGCGGCTATTGCCCCGCCTCAAGCCAACAAAGACGCACAGGCGGAGGTTgg > 1:540577/1‑288 (MQ=18)
ggaaccAGACCAACAGATCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCACAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAAc < 1:219574/285‑1 (MQ=255)
agAGCCGGAAAAACAGGTCGTTCCGGGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGGGCCAAAGCGCGCGAACGGGACCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTaa < 2:526593/286‑1 (MQ=255)
gggccagagaaaagggtggtgccGCGCAAAGCCGCCGTCGAAGCCGCTAGTGCCCGAGCCAAAGCACCAAAGCGGGAACAGCGACCGGCTAAGGCGGATCCAGAAGACCAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCCGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGGACCAGAAGACCAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAAc < 2:199729/267‑1 (MQ=18)
aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCAAGCAAGCGGGAACAGCCACAGGCTAATGCGGAACCCGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTTGCCGCGGCTATTGCCCGACCGCAGGAACAACAAGCCGCCCAGCAGAAGGTTGTAAACGa > 2:1081457/1‑289 (MQ=18)
aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCACAAAGCTGCCATCGACGCGGCT‑ATTGCACGCGCCCAAGCCCGCAAGCTGGCACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGAACTGCGCAACGCGGCAGTTGCCGAGGCCAGTGCCCGCGCGCAGGCCAAAAAAGCCGccccggcgatggctgtagaaga > 2:839634/1‑270 (MQ=255)
gaccgAACAACAGGTCGATACCGGCAAAGCGGCCGACGAAGCCGCTATTGCCCGAGGCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATGCGCTCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGa < 2:732448/284‑1 (MQ=255)
gCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGa < 1:203020/288‑1 (MQ=255)
cgcAGAACGACTGGACGATCCGCGAAATGCGGCCGTCGAGGCCGCTAGTGCACGGGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGa < 2:1086168/286‑1 (MQ=21)
cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGa < 1:950671/289‑1 (MQ=255)
gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACt > 1:588217/1‑289 (MQ=255)
aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTAGTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACCAggcata > 2:779720/1‑285 (MQ=255)
acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAATCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCTGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACt < 1:1081457/287‑1 (MQ=255)
aaacccggccGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACt < 1:118597/278‑1 (MQ=255)
agaaagggagaaccGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGGTGATCCGCGCAAAGCGGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTaaa < 2:276206/277‑1 (MQ=255)
caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCAGCGCAAAGCGGCAGTTGCCGCGGCTATTGc > 1:991557/1‑233 (MQ=255)
gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCCGCT‑ATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGCCTAACTgtc > 1:526593/1‑285 (MQ=17)
tCGGTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTAt < 1:356180/288‑1 (MQ=255)
tCGATCCGCGCAAAGCCGCCGACGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTAt < 1:1139670/288‑1 (MQ=255)
cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTc > 1:1028148/1‑289 (MQ=255)
tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCT‑ATTGCCCGTGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCCAAAAAGCCGCCCAGCAGAAGTTTGTAAACGAGGACTAAATGGTATTCAGa > 1:597563/1‑289 (MQ=17)
gcAAAGCCGCCGTCGAAGCCGCGATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagc < 1:424877/289‑1 (MQ=255)
aaggcgcccgcatgacaggcaaagacccGAGCCAAAGCGCGGAAACGGAGACAGCAACCGGCTAATGCGGAGCCAGAAGAAAAGGTTGATCCGCGCAAAGCAGACGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagcta < 2:13897/264‑1 (MQ=25)
aaccgccgTCGAAGCCGCGAGTGCCCGGGCCAAAGCGGGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:1252378/287‑1 (MQ=255)
agcgccgTCGAGGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATagctagct < 1:341930/287‑1 (MQ=255)
tgggcgTGGAAACCGCTGTAGCCGTGGCCAAAGCGCGGAAACTGGAACAGAAGCAGGCAAATACGGACCCAGAATAGCAGGTGGATCCGCGTAAAGCTGCCGTTGAAGCGGCT‑ATTGCACGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATagctagct < 2:1189001/284‑1 (MQ=21)
cgccgTCGGGGCCGCTATTGCCCGAGCGAAGACGCCAAAGCGGGAACAGCAACAGGCTAATGCGGGGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCG‑ATTGCCGGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATagctagct < 2:706928/287‑1 (MQ=25)
cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATggctagct < 1:12777/287‑1 (MQ=255)
cgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATggctagct < 1:25571/287‑1 (MQ=255)
gccgTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTccc < 1:902968/289‑1 (MQ=255)
cgcaggcgcgacggcaagAGCCAAAGCGCACAAACAGGAACGGAAAGAGGCGAAGACGAGACAAGAAGAAAAGGTTGAGCCGCGCAAAGCTGCCGTCGAAGCGGCT‑AGGGCACGGGCAAAAGCACGCAAGCGGGAACAGCAACAGGCTAATGCGGGACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 2:708158/271‑1 (MQ=255)
caacgCCGCTCTTGCCCGAGCCAAAGCCGGCAAACGGGAAAATCAACAGGCTAATGCTGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 1:1299217/284‑1 (MQ=255)
cGAAGCCGCGATTGGGCGAGCCAAAGCGCGCAAACAGAAACAGCAACCTGATAATGCGGAGCGAGAAGAACAGGTTGATCCGCGAAAAGCTGCCGTCAAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGTTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 1:998263/288‑1 (MQ=25)
cGAAGCCGCGATTGCCCGGGCCAAAGCGCGCAAGCGGGAACAGCACCCGGCGAATGCGGAGCCAGAAGCACAGGTTGCTCCGCGCAAAGCTGCCGTCGAGGCGGCT‑ATTGCACGGCCCAAAACACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 2:540577/288‑1 (MQ=25)
ctgctattacagcgcgcAAAGAGGGGAATCGGGAAGAGAAACCGGCGAATGCGGACGCAGAAGCAGAGGGTGATCCGCGAAAAGCTGGCGTGGAAGCAGCT‑ATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTtata < 2:1133658/269‑1 (MQ=25)
caaTTGCCCGAGCCAAAGCGCGCAAACGGGAACATCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAAc < 1:1233381/240‑1 (MQ=255)
catagCCCGAGCCAACGCGCGCCAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAAc < 2:588217/285‑1 (MQ=255)
accggCCAAAAGGCGCAAACTGGAACAGCAACCGGATAATGCGGAGCCAGAAGAAGAGGTTGATCCGCGCAAAGCTGGCGTCGAAGCAGCT‑ATTGGACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCa < 2:532648/281‑1 (MQ=255)
aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 1:231286/262‑1 (MQ=255)
aGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc > 2:231286/1‑262 (MQ=255)
aGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATc > 1:1038192/1‑288 (MQ=255)
aGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATc < 2:1038192/288‑1 (MQ=255)
cAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGAAACAGGCTAATTCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCACAAAAGCCGCCCAGCAGAAGGTTGTAAACGCGGACTCAATGGTAATCAGAATAGCTAGCGCCCCTTATACCCATAACCAGCGACAGaacgagcgcatt > 1:575882/1‑278 (MQ=255)
aaCAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGtt > 2:286637/1‑289 (MQ=255)
aaCCGTCTAATGCGGGACCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGgtg < 1:439944/287‑1 (MQ=255)
aCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAAAAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAATAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAACTGGTATTCAGAATAGCTAGCTCACCTTATACCAATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGtt > 1:1197701/1‑288 (MQ=255)
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CTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGC‑AAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT‑ATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTT > NC_000913/1708645‑1709215
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A