Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F1 I0 R1
|
61 |
128.9 |
2210554 |
98.2% |
2170764 |
271.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,708,930 |
C→A |
9.9% |
P671Q (CCG→CAG) |
rsxC → |
SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,708,930 | 0 | C | A | 9.9%
| 248.8
/ 5.1
| 97 | P671Q (CCG→CAG) | rsxC | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (39/45); new base A (7/6); total (46/51) |
| Fisher's exact test for biased strand distribution p-value = 7.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGT > NC_000913/1708655‑1709214
|
aCCCGAACAAAAGGTCGAGCCGCGGAAAGCCGCCGTCGAAGCCGCGATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGa < 2:256398/288‑1 (MQ=255)
acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAAAAGGCTAATGCCGAGCCAGAAAAACAGGTCGATACGCGCAAAGCCGCCGTTGAAGCCGCCATTGCCCGCTCCAAAGAC‑CGCAAACGGGAACAGCAAACGGCTAAAGCGGAGCaagaagta > 2:514473/1‑287 (MQ=17)
ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCCGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCA‑CGCAAACTGGAACAGCCAACGGCTAATACCGAGCCCGAACAACAg > 2:614165/1‑289 (MQ=11)
tcaatccacgataaGCCGCCGTCGAAGCCGCTATTGACCGTGCCAAAACGCGCAAGCTGGAACAGCAACATGCTAATGCGGAACCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgg < 2:1003032/276‑1 (MQ=255)
cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGAGCCAAAGCG‑CGCAACCGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGtt > 2:1054505/1‑289 (MQ=255)
tCCGCGCTAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACCGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGACCAGCAACCGGCTAATGCGGAGCCAGCAGAAGAGGTTGa > 2:7428/1‑288 (MQ=255)
tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCC‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGGCAGAAGAACAGGTTGa > 2:797674/1‑288 (MQ=255)
cgtaaaactgccgTTGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGATGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGACGCGCCCATTGCCCGAGCCCAAGCC‑CCCAAAGGGGCACAGCAAAAGGCTATAGCGGGACAAGAAGAGAAGGtcaaaacg > 1:146489/10‑281 (MQ=11)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGACCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGAGCCCAAGCT‑CGCAAACGGGCACAGCAACAGGCTAAACAGGAGACAGAAGAATCGGTTGAACcgc > 2:144890/1‑288 (MQ=17)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTTGAACCGGCTATTGCCCAGCCCAAAGCC‑CGCAAACCGGCACAGCCAAAGGCTAATGCCGAAGCAACAGAACACGTTGAtaccg > 1:516513/1‑284 (MQ=14)
cgacattgtgtccctggCCAACTCGCGCTAGCTTGACAAGCACTGGGCTAAGGTGAAACCAGAGGACTAGGTCGTTCCGGGCAAAGCCGCTGTGGAAACAGCAATTGCCCGGGCCAAAGCACGCAAGCTGGAAAAGCAACAGGCCAATGCCGAACCAGAACAACAGGTCGGCCCGGGCAAAGCTGCAGTCGAGGCCGCTATTGCCCGTGCCAAAGCG‑CGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGa < 1:735054/272‑1 (MQ=255)
ccGTGCAAAAGCGCGCAAGCTGTAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGTGCAAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa < 2:127254/289‑1 (MQ=255)
cGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCACCAAAGCA‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCACGCAAAGCTGCTGTCGAAGccaccatcgca > 2:69457/1‑278 (MQ=255)
gTGCCAAAGCGCGAACGCTGGAACAGCAACCGGCGAATGCGGAACCAGAATAACTGGTCCATCCGCGCAAAGCCGCCGTCGAAGCCGCTAGTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcg < 2:309223/289‑1 (MQ=255)
gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCCAACGGGAACAGGAACCGGCTGATGCGGAGCCAGAAGAACAGGTCGATCCGCTCAAAGCTGCCGTCGAAGCgggaaatgctgtc > 2:735054/1‑277 (MQ=255)
cAAGAGGCTAATGCGGAACCAGAAGCACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc < 2:605811/251‑1 (MQ=255)
aaCAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAGTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc < 2:290374/285‑1 (MQ=255)
aaCAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAAc < 2:944888/285‑1 (MQ=255)
aCAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCaa > 2:859365/1‑289 (MQ=255)
ggCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCA‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAACACGAAAACCCGAACAGCAAAAg > 1:1092969/1‑289 (MQ=14)
aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAACGCCGCCGTCGAAGCCGCTATTGCCCGAGCCCACGCG‑CGCAACCGGGAACAGCACCAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCCAAGCGGCCGTCAACGCGCCTCTTGCACTCGCCAACGCCACAAAGCGGGCCCAGCAAGAGGccgc > 1:686200/1‑286 (MQ=14)
gAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCCGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGCCGCCGACATTGCACGGGCCAAGGGCAGTAAGCCGTACCTGCAACAGGCTAATGCgg > 1:429129/1‑289 (MQ=17)
agccAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt > 2:140721/3‑289 (MQ=255)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCC‑CGCAAACGGGAACAGCAACCGGCTAATGCCGAGCCAGAAGAACCGGTTGATCCGCGCAACGCTGCCGTTGAACCGGCTATTGCACGGGCACAAGCCCGCAAGGCGGAACTGCAAcgagctgacgacgt > 1:621348/1‑276 (MQ=14)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATACGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCCAATGCGGt > 2:378028/1‑289 (MQ=255)
aaCAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGATAATGCCGAGCCAGAACACCGGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCa‑gaaga < 2:920949/289‑1 (MQ=255)
tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCCAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCCAGCCAAAGCG‑CCCCAACGGGAACAGCAACCGGATAATGCGGCGCCAGAAGAACAGGTTGATCCGAGCAAAGACGCCGACGAAGAGGCTATTGCAATCGCCAAAGAAACCAAACTGGAACAACAAAAGGACACAGCGGTGCCa‑gaaacagagggtaac > 1:560339/1‑277 (MQ=17)
tCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGAAAGCTGGCACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGa > 2:96826/1‑288 (MQ=255)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCAAAAGCGGTCCCC‑GAAGAACAGGGTGACTcgcg > 1:992368/1‑289 (MQ=255)
gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAACGCGGTACCA‑GCAGAACAGGTTGATCcgc > 2:992068/1‑288 (MQ=255)
ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑gg > 2:443161/1‑288 (MQ=255)
ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCAATTGCCCGAGCCCAAGCC‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCTGCCGTCCAACCCGCTCTTCCCCCCCCCAAACCCCACAACCCGGTCAAGCACCAGGCACAGTCGGTACAC‑AAAAAACAGGttcacacgccacaaaccg > 1:588093/1‑272 (MQ=14)
cGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑CGCCGtcgaagc < 2:560339/288‑7 (MQ=255)
cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAGGCG‑CGCAAACGGGACCAGCAACCGGCTAACGCGGAGCCAGAAGAACAGGTTGATCCGGGCAAAGCGGCCGTCGAAGCGGCTATTGCAACCGCTAAAGCCCGCAAGCTGGCACAGCAAGAGGCTAATGCGGTACAC‑GGAGAACTAGTCGAACAGCGCA‑AAGC‑GGCAGATGCCGTgg > 1:712943/1‑288 (MQ=17)
cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCCATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTCAAGCGGTGCCC‑GAAGAACAGGTCGAGCCCGACA‑AAGC‑GGTAGGTGCCGCGGCTATTGccc > 1:721324/1‑289 (MQ=17)
tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCCGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGAGCA‑AAGC‑GGCAGTTACCGCGGCTCATGCCc‑g > 2:638774/1‑288 (MQ=255)
gCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGACAAGCTGCCGTAGCAGCGGCTATTGCACGCGCCAAAGCCCGCAAGCCGGAACAGCACCAGGCTAATGCGGTAACA‑AGAGGACAGGTTCACCCGGCCA‑AAGC‑GGCCGTTGCCGGGGCTACTGCCa‑gc > 1:217886/1‑288 (MQ=17)
cGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACCACAGGTCGATCCGCGCAAAACCGCCGTCGAAGCCGCGATTGCCCGAGCCAAAGCT‑CGCAAACGGTAACAGAAACCGGCCAATGCGGCGCCAGACGAACAGGTAGACCCGCGCCAAGCTGCCGTCGAAGAGGCCATTTCACCCTCCACAGCCAGCACTATGGCACACCCACAGGCCAACGCGGGACCC‑GAAGAACACCCTAATCCGCGCC‑AAAC‑GGCAGTCACcgccgtcctttccggcccacaggcac > 1:189966/1‑266 (MQ=255)
gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCGGCTATTGCCCGAGCCAAAGCG‑CGCCAACGGGAACAGCCACCGGCTAATACGGAGCCAGAAGAACAGGATGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGAGCCAAAGCCAGCAAGCTGGACGAGCAACAGGCTAATGGGGTACCC‑GAAGAACAGGACGAGCCG‑GCC‑ACGCAAGCAGTTGCCGCGGCGATTGCCC‑gcgccaagctcaa > 1:842743/1‑280 (MQ=17)
tGGAACAGCAACAGACTAATGCCGGGCCAGAAAAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAg < 2:1062830/288‑1 (MQ=255)
ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAgcc > 2:623101/1‑289 (MQ=255)
ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAgcc > 2:780377/1‑289 (MQ=255)
ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAACGGATAATGCGGTACCA‑GAAGAACAGGTTGAACCGCGCA‑AAAC‑GGCAGTTGCCGCGGATATTGCCC‑GCGCCCAGGCCAAAAAAgc > 1:463027/1‑288 (MQ=255)
aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGACAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAgccgcc < 2:1092969/289‑1 (MQ=255)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAg < 1:919250/154‑1 (MQ=255)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAg > 2:919250/1‑154 (MQ=255)
cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTCAACCGCCCA‑AAGC‑CGCAGTTGCCGCGGCTCTTGCCCGGCCCTC‑GGCCAAAAAAGCCGccccg > 1:496098/1‑286 (MQ=18)
cacgCTAATGCCGAGCCAGAACCACAGGTGCATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGa < 2:816815/286‑1 (MQ=255)
aatcTAATGCGCAGCAAGAACGACGGGTCGATCCGCGCAACGCCGCCGTCAAAGCCGCTATTGCCCGCGCCAAAGCA‑CGCGAACGGGAACAGCGACAGGCTAATGCGGAGACAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCAGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGaa < 1:144890/286‑1 (MQ=18)
ggCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCG‑CGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATCCGGCACCA‑GAAACACAGGTTGAAACGCCGA‑ACTC‑GGCAGTTGCCGCCACCATTGCCC‑GCGCTCCGGCCAAAACACCCGCCcagcccaag > 1:767026/1‑284 (MQ=11)
cTAATGCTGAGCCAGAACAACAGGGCAAGCCGCGCAACGCCGCCGTCGAAGCCGGTATTGCCCGGGCCAAAGCG‑CGCAAACGGGAAAAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGaa < 2:427121/286‑1 (MQ=255)
cTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGa < 2:463027/285‑1 (MQ=255)
tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc > 1:918380/1‑189 (MQ=255)
tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc < 2:918380/189‑1 (MQ=255)
tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTGTTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTa < 2:116079/289‑1 (MQ=255)
aGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAAAAGCAAACGGCTAATGCGGAGCCAGAAGAACAGGTTTATGCGCGTAAAGCTGCAGTCGACGCGGCTATTGCACGCGCAACAGCACGCAAGCTGGAACAGCAACCGGCTAAAGCGG‑ACCACGAAGAAGAGGTTCAGTCGTGCA‑AAGC‑GGCAGATGCCGAGGCACATGCCC‑GCGCTCAGGACAAAAACCCCACCCTGCAGAAgcatgtcatcc > 1:757470/1‑278 (MQ=17)
aGCCAGAAAAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCTGCTAATTCACGCGCCAAAGCCAGCAAGCTGGAACAGCAACAGGCTAATGCTGTACCA‑GAAGAACAAGCTAATCCG‑GCACAAGC‑GGCAGTTGCCCCAGCTCTTACCC‑GTGTTCAGGCCAAAAAAaccgccacggcgacgctgttcaacga > 1:726896/1‑269 (MQ=17)
gCCAAAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGa < 2:8459/275‑1 (MQ=255)
cccAGAACAACAGCTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGa < 2:128672/287‑1 (MQ=255)
accAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGa < 2:896200/287‑1 (MQ=255)
cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGa < 2:992368/289‑1 (MQ=255)
aacaacAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AACC‑GGCAGTTGCCGCGGCCATTGCCC‑GCGCTCAGGCCAAAAAAGCCCCCCAGCAGAAGGTTGTAAACGAggcata > 1:671074/1‑285 (MQ=255)
acagcgcgcgccGCTCAAACCGGCCGTTGAAGTCGCTATTGCCGCGGCCAAAGCG‑CGCAAACGGGAACAGAAACAGGCTAGTGCGGGTCAAGAAGAAAAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATg < 1:915308/279‑1 (MQ=21)
acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAg < 2:386246/254‑1 (MQ=255)
acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGACAAAAAAg > 1:386246/1‑254 (MQ=255)
acaGGTCGACCCGCGAAAAGCCGCCGTCGAAGCCGCTATCGCCCGCGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATg < 1:197420/289‑1 (MQ=255)
caGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCCGCTCTTGCCC‑GCGCTCAGGCCAAAAACGCCGCCCAGCAAAAGGGTGTAAAcctgtcccgtata > 1:8459/1‑276 (MQ=18)
gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCCCA‑AAGC‑GGCAGTTGCCGCGGCTATTGc > 2:937565/1‑230 (MQ=255)
atatgcgcAACGCGGGCGTAGAACCCGCGATGGCCCGATCCGAAGCG‑TGCAAAGAGGAACGGCAACCGGCTAATGCGGAGCCAGAATACGAGGTCGATCCTCGAAAAGCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCa < 1:69457/284‑1 (MQ=21)
aggcgccgTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:1036875/286‑1 (MQ=255)
aGCCGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:115443/289‑1 (MQ=255)
aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:755464/289‑1 (MQ=255)
aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:865522/289‑1 (MQ=255)
aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:146489/289‑1 (MQ=255)
aGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCACAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctag > 1:865522/1‑288 (MQ=255)
aGCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAAtagctagc < 2:712943/289‑1 (MQ=255)
cgccgTCGAAGCCGCCATTGCCCGAGCCACAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACTGGTTGATACACGCAAATCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATagctagct < 2:817546/287‑1 (MQ=255)
cggagacGCTAGTGCCCGATCAAAAGCGCCGGAACCGAGAA‑AGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATGGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 1:614165/282‑1 (MQ=25)
cGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 2:671074/288‑1 (MQ=255)
cGAAGCCGCAATGCCCCGGGCCAAAGCG‑CGAAAACGGGAACAGCAACCTGGTAATCAGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTta < 1:514473/288‑1 (MQ=25)
tagtGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAAc < 2:524139/286‑1 (MQ=255)
tATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATaa > 2:267722/1‑288 (MQ=255)
tATGGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGAGCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAAGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAAc < 2:516513/289‑1 (MQ=255)
ttGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCa < 2:626406/289‑1 (MQ=255)
ttGCCCGAGCCAAAGCA‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCa < 1:140721/289‑1 (MQ=255)
aaGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACAt > 1:572414/1‑288 (MQ=255)
aagcaggcAAACGGGAACAGCAACCGGCTACTGCGGAGCCAGAAGAACAGGGGGATCCGCGCAAAGCGGCCGTGGAAGCGGCTATTGCACGCGCCAAAGAACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATc < 1:1033083/283‑1 (MQ=255)
g‑cgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATcgcg < 2:767026/288‑1 (MQ=255)
gcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑TAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCa < 2:1035825/288‑1 (MQ=255)
gcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCa < 2:840804/288‑1 (MQ=255)
gcAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCa < 2:588093/288‑1 (MQ=255)
aaccGGGAACAGCAACCGGCTAAGGCGGAGCAAGAAGAACAGGTTGAACCGCGCAAAGCGGCCGTCGAAGCGGCTATTGAACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTa < 1:623101/286‑1 (MQ=255)
aaaacggaaatacAACAGGCTGATGCGGAGCCAGAAGACAAGGCTGATCCGCGCAAAGCGTCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTa < 1:712752/277‑1 (MQ=37)
cGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGc < 2:496098/289‑1 (MQ=255)
aaCAGCAACAGGGTAATGCGGAGCCAGAAGAACAGGTGGAGCCGCGCAAAGCTGCGGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGt < 1:896985/288‑1 (MQ=255)
acAACCGGCAAATGCGGAGCCAGAAGAACAGGTTGATCCACGCAAAGCTGCCGGCGAAGCGGCTATTGCACGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGAGCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGgtg < 1:661683/288‑1 (MQ=255)
cAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAAAGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACAAGCGCCAGACATCGCGCATTAAGCTGGTGgtgt > 2:564007/1‑289 (MQ=255)
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ACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCG‑CGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCA‑GAAGAACAGGTTGATCCGCGCA‑AAGC‑GGCAGTTGCCGCGGCTATTGCCC‑GCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAAATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGT > NC_000913/1708655‑1709214
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
