Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 665,104 A→C 15.3% S29R (AGT→AGG)  rlpA ← septal ring protein, suppressor of prc, minor lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913665,1040AC15.3% 178.9 / 4.3 82S29R (AGT→AGG) rlpAseptal ring protein, suppressor of prc, minor lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (34/32);  new base C (4/11);  total (38/44)
Fisher's exact test for biased strand distribution p-value = 9.46e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

CGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCT  >  NC_000913/664870‑665338
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
cgtacggtgttttggtgcGAATGTTTC‑CCCGAGGCCCGGCAGGTTACGG‑CCGTGTTGCGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa                                                                                                                                                                                                                                          <  1:785242/222‑1 (MQ=255)
    aGCTGTGTCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCg                                                                                                                                                                                                                                       >  1:1009171/1‑238 (MQ=255)
         tgtCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTCCATACCGCAGGCTGCGGTACACTTACCGTCTGtt                                                                                                                                                                                                                                 >  1:558833/1‑239 (MQ=255)
         tgtCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGtt                                                                                                                                                                                                                                 >  1:306225/1‑239 (MQ=255)
         tgtCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGGCCGCCCCGCTAATTTCAACTTTAGGGCCGTTACATACCCCAGGCGGCGGGACCCTTACCGCCTGtt                                                                                                                                                                                                                                 >  2:854159/1‑239 (MQ=255)
         tgtCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGAGGTTCGAAACGCGGGTCAGCCCCGCTAATTTCAACTCTAGGGCCGTTAAAGACCCCAAGCTGCGGGACACTTACCGCTTGtt                                                                                                                                                                                                                                 >  2:266204/1‑239 (MQ=255)
           tCGGAGCGAATGCTTCCCCAGAGG‑CCGTGAGGTTGCGG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTg                                                                                                                                                                                                                                <  1:10206/238‑1 (MQ=255)
             ggttctattttttCGCCAGGGC‑CCGTCGGTTTCCGG‑CGGGGTTGGGCTC‑CATGGTGTCCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCt                                                                                                                                                                                                                              <  2:197268/227‑1 (MQ=255)
              gATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGGCCGCCACGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGGAAACTTACCGTCTGTTGCCGa                                                                                                                                                                                                                            >  1:489374/1‑239 (MQ=255)
                   aaTGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc                                                                                                                                                                                                                       >  1:197657/1‑239 (MQ=255)
                    atccctccccAGGGG‑CCGT‑AGGTTTCCGCCCGGGTTCGGAAT‑CCAAGATTGCCGCCAGTCCCGGCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc                                                                                                                                                                                                                       <  1:873386/230‑1 (MQ=255)
                    aggcgtcgacggggg‑CCGGCGGGTTACGG‑GCGGGTT‑GGCATACATAGTTTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc                                                                                                                                                                                                                       <  2:1009171/225‑1 (MQ=255)
                     ttgctcgcccagggccggtaggtttACGG‑CCGGGTTCGGAAT‑AATGGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc                                                                                                                                                                                                                       <  1:931738/215‑1 (MQ=255)
                                      gTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCAGGCTGCGGGACCCTTACCCTCTGTTGCTGGCCAACACCCCTTGTaaacaccgc                                                                                                                                                                                                     >  2:55843/1‑231 (MQ=255)
                                       tcgggTTACGG‑CCGGGTTGGGCTT‑CATAGATGGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCcgcg                                                                                                                                                                                                    <  1:386181/236‑1 (MQ=255)
                                                      ggTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCATGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc                                                                                                                                                                                     >  1:580603/1‑239 (MQ=255)
                                                             cat‑catAGTTGGCCCCAAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCa                                                                                                                                                                               <  1:854159/238‑1 (MQ=255)
                                                                        tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGTGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCGGATCCCGAGc                                                                                                                                                                     >  1:1084573/1‑238 (MQ=255)
                                                                        tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAg                                                                                                                                                                                                  >  2:831643/1‑210 (MQ=255)
                                                                        tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAg                                                                                                                                                                                                  <  1:831643/210‑1 (MQ=255)
                                                                        tGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGGACATGCCCCGGGCATTCCT‑CCCGCGGTGCAAATCCCGGGcc                                                                                                                                                                    >  2:719857/1‑239 (MQ=255)
                                                                        gccccccAGTCCCCCCTG‑GTTAAATCGAGACGGGTCCGGCCCGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTCCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGcc                                                                                                                                                                    <  2:197657/234‑1 (MQ=255)
                                                                          ccgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCCCGATTTTGT‑AGCTTTTCCCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCAc                                                                                                                                                                  <  1:719857/239‑1 (MQ=255)
                                                                          ccgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCa                                                                                                                                                                   >  1:930112/1‑238 (MQ=255)
                                                                          cccccAGTCCC‑CCTGTGTTAATTGGAGGCGGTTCCTGCGCGTTTTTTT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCAc                                                                                                                                                                  <  2:21334/236‑1 (MQ=255)
                                                                           cgccAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCACCTATAGGGCCGTTACATACCGCAGGCGGCGGGACACTTACCGTCTGTTGTTGCCCATCATGCCTTGTACCTGCCCCGCGCCATCCT‑CCCGCAATGCAGATcccctcaccc                                                                                                                                                                  >  2:1018620/1‑231 (MQ=255)
                                                                               aGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCCCTTGTACATGCCGCGGGCATTCCT‑GCCGCGAGGCAGATCCCGAGCCACTGCtt                                                                                                                                                             >  2:56704/1‑239 (MQ=255)
                                                                                  cccGCCTG‑GCTAAATCGAGCCGGATCCTGCCGGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTAc                                                                                                                                                           <  1:370826/238‑1 (MQ=255)
                                                                                         g‑gCTAAACGGGGACGGTTCCTGCTCGTTTTTGT‑ATCTTTTACCGCCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTCCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcg                                                                                                                                                   <  1:466659/239‑1 (MQ=255)
                                                                                          gtttAAATCGGTGCGGTTTCTGCCCGTTTTTGT‑CGTTTTTCCCGGCGCGCTGGTAATCCTGATTTCCCGTCGCTGTCAGTGGTTCGAAACGCGGGTCCCCCCCGCTAATTTCAACTATGGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcg                                                                                                                                                   <  2:820485/236‑1 (MQ=255)
                                                                                             tAAAGCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑c                                                                                                                                               <  1:771307/239‑1 (MQ=255)
                                                                                                      ccGGATCCTGC‑CGCTTTTTTGCGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACCCGGGTCCGCCCCTCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTaca                                                                                                                                       <  1:882122/237‑1 (MQ=255)
                                                                                                      aCGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCATTACCGCCTGTTGCGGCCCACCATCGCTTGTACAGTCCCCGAGCATTCCTCCCCGCG‑TCCAGATCCCGACCCCCCGCTTCCCCATTGGGAA‑CCCCttgcc                                                                                                                                       >  2:319664/1‑235 (MQ=255)
                                                                                                               gCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCCCGAGCATTCCT‑GCCCCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCCCTTACACGCTTTTCGa                                                                                                                             >  1:430410/1‑239 (MQ=255)
                                                                                                                ccctgtttttgttttttttCCCGTTGCGGGGGTAATCCTTTTTTGCGGTCGAGTTCAGTGGTTCGAAACGCGGCTCCGCCCCGCTAATTTCACCTATGGGGCCGTTACATACCGCAGGCTGCGGCACACTTCCCGTTTGTTGCTGCCCCTCACCGCTGGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGa                                                                                                                             <  2:558833/224‑1 (MQ=255)
                                                                                                                    aTTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCg                                                                                                                                                                                                                   <  1:418338/150‑1 (MQ=255)
                                                                                                                    aTTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCg                                                                                                                                                                                                                   >  2:418338/1‑150 (MQ=255)
                                                                                                                     ttttGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGGGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACCCCTTACGCATTGCGCC‑CCCCTTAAACGCtttctaacaaaaa                                                                                                                       >  2:437608/1‑229 (MQ=255)
                                                                                                                     ttttGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCCCTTACACGCTTTTCGGCAACAt                                                                                                                       >  1:552519/1‑239 (MQ=255)
                                                                                                                        tGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACCttt                                                                                                                     >  1:557385/1‑238 (MQ=255)
                                                                                                                               ttttCCCGCCGCCTTTGTAATCCTTTTTTGCCTTCCGTTTCGGGGGTTCGAAACGGGGGTCCCCCCGCCTAATTGCAACTATAGGGCCGTTACATCCCGCAGGCGGCGGTACCCTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCtgtg                                                                                                              <  2:557385/239‑1 (MQ=255)
                                                                                                                                tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACACCATTTTCCTGTgg                                                                                                             >  1:1080631/1‑239 (MQ=255)
                                                                                                                                tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTCACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCCTCGCTTGTACATTCCGCGAGCATTCCT‑GCCGCGATGCCGATCCCGAACCACTGCTTACGC‑CTGTGCACCCCCTTCCACCCTTTTCGAAAACATTTTCCTTTgg                                                                                                             >  2:80999/1‑239 (MQ=255)
                                                                                                                                  tACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATCCAGATCCCAAGCCACTGCTTACGCATTTCGCC‑CCCCTTCACCCCTTTTCGCCAACCTTTTCCTGTGGgt                                                                                                           >  2:949004/1‑239 (MQ=255)
                                                                                                                                       tCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGCTGCAGATCCCGACCCCCTGCTTACGCATTGCGCA‑CCTCTTCCACGCTTTTCCCCACAATTTTCCTGTGGGGGGGGa                                                                                                      >  2:1072493/1‑239 (MQ=255)
                                                                                                                                        cgcgCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCTACCCACTGCTTACGCCTTGCGCC‑CCTCTTac                                                                                                                                        >  1:794285/1‑204 (MQ=255)
                                                                                                                                         gggcTGGGAATCCTGTTTTGCCGCTGGGTTCGGGGGTTCGAAACGGGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt                                                                                                    <  1:665025/237‑1 (MQ=255)
                                                                                                                                         gcccttgTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGTTAATTTCAACTATAGGGCCGTTCCATCCCGCAGGCTGCGGTACCCTTACCGTCTGTTTCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt                                                                                                    <  1:266204/233‑1 (MQ=255)
                                                                                                                                          cgcTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc                                                                                                                                                                                     <  1:288673/158‑1 (MQ=255)
                                                                                                                                          cgcTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCcgc                                                                                                                                                                                     >  2:288673/1‑158 (MQ=255)
                                                                                                                                                         tttcccaccccgTTCTGTGGTTCAAAACGTGGTCCCCCCCCGCTAATTTCAACTATAGGCCCTTTACATACCGCGGGCTTGGGTGCAGTTCCCGTGTGTCGCTCACTGCTTTCTCTTATACGGGCCGCGTGCATTCCT‑TCCAGGATGCAGATCCCCGGCCAATGCTATCGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTGCCTGGGGGTGTGGATTGACATTACAATCCCGa                                                                                    <  2:264247/229‑1 (MQ=255)
                                                                                                                                                              tttaaagagagagggTTCGAAACGCGGGTCCGCCCCTCTAATTTCAACTTTTGGGCCGTTACATACCCACGGCTGCGGTACACTTACCGTCTGTTGCTGCCCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa                                                                               <  2:162600/226‑1 (MQ=255)
                                                                                                                                                              cGTCGGGTTAAGGGGTTCGAAACGCGGGTCCCCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa                                                                               <  1:949004/239‑1 (MQ=255)
                                                                                                                                                               gTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATTCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGGCAACATTTTCCTTTGGGTTTGGATGGCCATTACAATCCCGAACCCa                                                                               >  1:576915/1‑238 (MQ=255)
                                                                                                                                                                  gcgTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGcc                                                                            >  1:1005538/1‑238 (MQ=255)
                                                                                                                                                                               cGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt                                                                                                    >  2:76844/1‑201 (MQ=255)
                                                                                                                                                                               cGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAtt                                                                                                    <  1:76844/201‑1 (MQ=255)
                                                                                                                                                                                  accgggggTCCCCCCCCCTATTTTCAACTATAGGCCCGTTACCTACCGCGGGTTGCGGTACACTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAgcgc                                                           <  2:1080631/234‑1 (MQ=255)
                                                                                                                                                                                     gcgGGTCCGCCCCGCTAATTTCAACTATAGGGCCTTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa                                                        <  1:909471/239‑1 (MQ=255)
                                                                                                                                                                                     gcgGGTCCCCCCCGCTAATTTCAACTATAGGGCCTTTACATACCGCAGGCTGCGGTACTCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa                                                        <  1:1072493/239‑1 (MQ=255)
                                                                                                                                                                                     ccgGGTCCCCCCCTTTTATTTCAATTTTGGGGCCTTTCAACACCGCGGGGTGGGGTCCCCTTCCCGTCTGTTGCTGCCCATCATCGCTTGTCCATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa                                                        <  2:430410/238‑1 (MQ=255)
                                                                                                                                                                                     ccgGGTCCCCCCCGCTAATTCTAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa                                                        <  1:350336/238‑1 (MQ=255)
                                                                                                                                                                                     ccgGGCCCCCCCCCCTAATTTCAACTTTAGGGCCGTTACTTCCCGCAGGCGGCGGTCCCCTTCCCTTCTGTTGCCGCCCATCACCCCTTTTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa                                                        <  2:1005538/238‑1 (MQ=255)
                                                                                                                                                                                      cgGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGccccggtctctttta                                                        >  1:162600/1‑224 (MQ=255)
                                                                                                                                                                                              ccccTCTAATTTCAACTATGGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATa                                               <  1:437608/239‑1 (MQ=255)
                                                                                                                                                                                                     aaTTGCAACTAAGGGGCCGTTACCACCCGCAGGCTGGGGTACCTTTACCGTCTGTTGCTGGCCCACATCGCTTGTACATGCCGGCAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGAcc                                        <  1:550919/239‑1 (MQ=255)
                                                                                                                                                                                                        ttCAACTTTAGGGCCTTTTCATCCCCCAGGCTGCGGTACACTTCCCGTTTTTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGGGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGt                                     <  2:489374/239‑1 (MQ=255)
                                                                                                                                                                                                         ccAACTAGAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTg                                    <  1:55843/238‑1 (MQ=255)
                                                                                                                                                                                                                 gggcccGTTCCCTCCCGCGGGCGGGGGTTCACTTACCCTCGTTGGAAGACCTACATCGCTTGTACTTGCCGCAGGCATTCCT‑GCCGCGATGCAGATCCCGGGCCACTGCTTACGCATTGCGCA‑CCTCTTACGCGCTTTTCGACAACATTTTCCTGTCGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa                            <  2:70574/235‑1 (MQ=255)
                                                                                                                                                                                                                 aGGCCCGTTACATGCCGCGGGCCGCGGTACACTTACCGTCTGTTGCTGACCATCCGTGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa                            <  1:1071703/239‑1 (MQ=255)
                                                                                                                                                                                                                   ggCCGTTACATCCCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCACCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGa                            <  1:907450/237‑1 (MQ=255)
                                                                                                                                                                                                                        ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAgcg                                                            >  1:156980/1‑200 (MQ=255)
                                                                                                                                                                                                                        ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTAAAATCCCGAACCCAGCCATCAGCACAATTAACGCCGATCCTCCCTAACTGACCAGTGGGAGCGGAAaccccc                     >  2:1039122/1‑237 (MQ=255)
                                                                                                                                                                                                                        ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGCGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACCATTATCGCCGAGCCTCCATAACTGACCAGTGGAACCGGAACCCCt                      >  1:100957/1‑238 (MQ=255)
                                                                                                                                                                                                                        tcaCATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTTTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTACCGCCGATCCCCCATAACTTACCACGGGGAGGGGAAccccaa                     >  2:761778/3‑237 (MQ=255)
                                                                                                                                                                                                                                  cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa                                                                               >  2:59643/1‑171 (MQ=255)
                                                                                                                                                                                                                                  cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa                                                                               <  1:59643/171‑1 (MQ=255)
                                                                                                                                                                                                                                  cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCCGCCCACTTAGCGCCGATCCTCCATAACTGACCAGGGGGCGCGGAACCCCTAAAACCGGAAg           >  2:726346/1‑239 (MQ=255)
                                                                                                                                                                                                                                  cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAAACCCTACAACCGGccg           >  1:582347/1‑237 (MQ=255)
                                                                                                                                                                                                                                    tgcctcGGTACCCTTACCGTCGTGTGCTGACCATCACCGCTTGTACATGCCGCGATCTTTCCT‑GCCGTGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa         <  1:902022/234‑1 (MQ=255)
                                                                                                                                                                                                                                    ggCTGGGTTACACTTCCCGTTTTGTGCGGCCCATTCTCGCTTTGCCATGCCGCGAGCATTCCG‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCGTACCCGCTTTTCGACAACATTTTCCTGGGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa         <  2:306225/239‑1 (MQ=255)
                                                                                                                                                                                                                                     gctgggttccacTTGCCTTCTGTTGCTGACCAGCATCGCTTGTACATGCCCGGGACATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCGCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa         <  1:319664/229‑1 (MQ=255)
                                                                                                                                                                                                                                            tACCCTTACCTTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGGGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCt  <  1:774192/238‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            
CGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGG‑CCGTCAGGTTACTG‑CCGGGTTCGGCAT‑CATAGATTGCCGCCAGTCCCGCCTG‑GCTAAATCGAGACGGATCCTGCACGATTTTGT‑AGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCT‑GCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCA‑CCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCGCT  >  NC_000913/664870‑665338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A