Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F17 I0 R1
|
160 |
98.0 |
2214160 |
89.0% |
1970602 |
222.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
540,546 |
C→T |
12.9% |
intergenic (+38/‑19) |
allB → / → ybbY |
allantoinase/putative uracil/xanthine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 540,546 | 0 | C | T | 12.9%
| 192.5
/ 2.6
| 96 | intergenic (+38/‑19) | allB/ybbY | allantoinase/putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base C (20/59); new base T (9/3); total (33/63) |
| Fisher's exact test for biased strand distribution p-value = 1.33e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 |
CGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCG > NC_000913/540310‑540769
|
cctttgtattccGCCGAATAGCAGCGTTGTTTTTACCAACGACGATCTGG‑AAGACCGCCACAAAGTCATCCCTTATGGTGGCCTTACCATTGGCGCGCGT‑ATCCCGAAAACCATCCTGCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATtctc < 2:620187/232‑1 (MQ=255)
ttaattccccctaaactgcgttATGTTCTTGCCAATGACGACTCGG‑TATCGCACCTCAAAGTCAGCCCGTAGGGTGGCCGTACCATTGGCGAGCGT‑ATCACGAAACCCATCTTACGTGGTGATGCGGTTTAAGACATTGAACAGGGCTTTCCTGGTGCGCCGAAAGGTCAAGTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGt < 2:213064/218‑1 (MQ=255)
ttattcaACCCAATAGCAGTTTTTTTTTTACCAAGGACGATCGGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGtt < 2:888839/237‑1 (MQ=255)
tcattcaGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGtt < 1:85740/239‑1 (MQ=255)
cattcaGCCGAATAGCAGTTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTa < 1:318667/239‑1 (MQ=255)
ttctcccgaatgatactatagTTCTTACCAATGACGATTTGGAAATCTCGCGA‑AAAGTCAGCCTCTATGTTGGCCTTCCCATTGGCGCGCGT‑AGCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTGATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAg < 2:518559/219‑1 (MQ=255)
ttcaGCCAAATAGCAGCTATTTTTTTACCAAGGACGATCTGG‑AACATCGCCCCAAAGTCAGCCCGTTTGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAg < 2:73242/239‑1 (MQ=255)
atcaGCCGAATAGCAGCTATGGTCTTACCAAGGAAGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTTGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAg < 1:354697/238‑1 (MQ=255)
aaTAGCAGCTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCTCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTTTCCTTAAACATCCGCAGTAATCTTGCCCCTGCAATGCCCGTCCTTTCGGCGGGGCTtcttccgcaaacggagggtt > 2:464915/1‑222 (MQ=255)
tgcagcTATGTTTTTACCAATGACGATTTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATg < 2:325371/238‑1 (MQ=255)
gcTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAAAATAAACAGTAAACTGCCACCTCCAATGACCGTCCTTGCGTCGGGGTCTCTCCgtgtatgcctgcgttgtttttc > 2:151998/1‑218 (MQ=255)
cTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTACGGGGTGTTTTTTTTTAATTTTGcc > 1:879993/1‑238 (MQ=255)
aCCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCTTGTCCGGGTAAGGGGGGTTTATGTTCAATTTTTCAggc > 1:138538/1‑237 (MQ=255)
cAATGACGATTTTG‑AATCTCGCCACCAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAg < 1:59784/239‑1 (MQ=255)
aaTGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCACTCTCCCGTTAAAGGGGGTTTTTTTTCAAtttttcgctctg > 1:688768/1‑230 (MQ=255)
tGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGTCGGCCATTCTCCGGTTCAGGGGTGGTTTAGTTTAATTTTTCCGTcgtgcc > 1:579550/1‑234 (MQ=255)
aTCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCCGTTAAGGGGGGTTTTTTTTCCATTTTTTAGTCAGCCCCGgaa > 1:915686/1‑239 (MQ=255)
tCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGGCTTGTCCCGGTTAGGGGGGTTTATGTTCCATTTTTCGGTCAGCCCCGcaaa > 1:212757/1‑238 (MQ=255)
tCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCcgc < 1:629622/234‑1 (MQ=255)
tttg‑AATATCGCCAAAAAGTCAGCCCGTTTGTTGGCCGTACCATTGGGGCCGGT‑ATCACGAAAACCATCTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGc < 2:683294/236‑1 (MQ=255)
cTGG‑AATATCTCCAAAAAGTCAGCCCGTTTGTTGGGCGTACCATTGGCGCGCGG‑TACACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGc < 2:39407/239‑1 (MQ=255)
cTGG‑AATATCGCCACAACGTCAGCCCGTATGTTGGCCGTCCCATTGGCGCGCAT‑ATCACGAAAACCATCTTACGTGGTTATGTGATTTACGACATTGAACAGGGCTGCCCTGTTGCGCCGAAAGTTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGc < 1:72566/239‑1 (MQ=255)
cttgtatttCGCCACAAAGTCAGCTCGTATGTTGGCCGTTCCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGGGGTGATGGGATTTACGGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGc < 2:461923/231‑1 (MQ=255)
ttccccAAAAAGTTCGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTTATTTTCGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTAt < 2:375033/235‑1 (MQ=255)
ttCGCCACAACGTCCGCCCGTATGTTGGCCGTCCCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTAt < 2:986093/238‑1 (MQ=255)
attccccaaaagtaaccacttttGTTGGCCGTACCTGTGGCGGCGGT‑AACACGAAAACCATCTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTGCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCTTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTAt < 2:419657/217‑1 (MQ=255)
cGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAACCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCCGTGTAGGGGTGTTTTTGTTTCACTTTTCTGTTAGCCCCGCAAGCCGGttctgt > 2:629622/1‑235 (MQ=255)
cGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCACTGCCCGTCCTTGCGGCGGCCATTGTTCGGTTTAGAGGTGTTTTTTTTCAAATTTGCAGTCAGCCGGGCAAGCCCGTTATCa > 1:775178/1‑239 (MQ=255)
cGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCGTTCTCCGGTTAAGGTGTGGTTATGTTCAATTTTTCAGTCAGCCCCGAAAGCCTGTTATCa > 1:39407/1‑239 (MQ=255)
ccGTATGTTGGGCGTACCATTGGCGCGCGT‑ATCACGAAACCCATCTTACGTGGTGATGTGATTTACGACAATGAACTGGGCTTTCCTGTTGCGCCGAAAGGTCAATTTACCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGtt < 1:817454/238‑1 (MQ=255)
aTGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCt < 1:139145/239‑1 (MQ=255)
tGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTATGGGGGGTTTTTTTTTACTTTTTCGGTCATCCGCCGAAACCGGTTTTCAGGagattaggggggtttttt > 2:1047570/1‑222 (MQ=255)
ggCCTTCCCATTGGGCCACGT‑CTCACCAAGACCTTCTTCTGTGGTGATCGTATTTACGCGATTGAACAGGGGTTCCCTGGTGATGCGAAAGGTCTATTTATTCTTAACAATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATGCTTCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTAtt < 2:737959/239‑1 (MQ=255)
ggCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCCGTTAAGGTGTGTTTTTGTTCCATTTTTCAGTCAGCCCCGAAAGCCTGTTTTCAGGGTTTTA‑GTGGGTTTTTTTTAtt > 1:925389/1‑239 (MQ=255)
ggCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCCCCGGTTAAGGAGGGTTTTTGTTCCATTTTTGAGTCAGCCGCGAAAGCCTGTTTCCCGGCTTTCATGGGGTtttttttttt > 1:550430/1‑237 (MQ=255)
tACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGGGTGTTTATGTTCAATTTTTCCGTCAACCGCGCAAGCCTGGTTTCAGGGTTTCA‑GTTGtttttttttttttttt > 1:92191/1‑238 (MQ=255)
tctaTTGGCGCGCATAATCA‑GAAAACCATTTTACGGGGTTATGTAATTTACAGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTg < 2:829496/235‑1 (MQ=255)
aCCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCAATCTCCGGTTAAGGGGGGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGGTTTTTTTTAtttttttg > 1:289817/1‑237 (MQ=255)
ttGGCGCGGTT‑ATCACGAAACCCATCTTACGTGGGGATGTGATTTACGCCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAa‑ca < 2:668220/239‑1 (MQ=255)
ttGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGGTAAGGGGGGGTTTTGTTCAATTTTTCAGTCAGCCGCGGAAGCCTGTTATCAGGGTTTTT‑GTGGTTTTTTTTTTTTTTTTGCaca > 1:835425/1‑236 (MQ=255)
tGGCGTGGGT‑ATCACGAAAACCATCTTTCGGGGTGATTTGATTTGCGAAATTGAACAGGGCTTCCCTGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAa‑cac < 2:976392/239‑1 (MQ=255)
cgT‑TTCACGAAAACCATCTTACGTGGTTATTTGATTTACGACATTGAACAGGGCTTCCCTTTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTtgt < 1:151998/238‑1 (MQ=255)
cccgaaaacccttttcctggggtatgtgatTTACGAACTTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTtcc < 2:212757/216‑1 (MQ=255)
acactttttcctggggATGTGTATTAGGACATTGACCCGGGCGTTCCTGTTGCGCCGAAAGGTCAATTTTACCTTAAACAGCAGCAGTAATCGGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 2:1024130/228‑1 (MQ=255)
aCCCTCTTACGTGGTGATGTTATTTACGACATTGAACAGGGCTCCCCTTTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 2:320389/239‑1 (MQ=255)
aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACg < 1:1010747/239‑1 (MQ=255)
ccATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGGTTAGGTGTGGTTATTGTCAATTTTGCAGTCAGCCGCGGAAGCCCGTTATCAGGGTTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGGTGTGGTTTCTCCT‑Ac > 1:856656/1‑237 (MQ=255)
cATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCTTCTCCGGTTAAGGGGTGTTTATTTTTAATTTTTCCGTCAGCCCGCAAAGACCGTTTTCTGGGTTTTT‑GGGGGTTTTTTTTTTTTTTTTTAA‑CACGGTTTTGGtgtttcccccac > 2:31954/1‑227 (MQ=255)
cTTTCGTGGTGATTGGATTTACGACATTGAACAGGGTTTCCCTGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACt < 2:1090712/239‑1 (MQ=255)
cTTACGTGGTGATGTGATTTACGGAATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACt < 1:278562/239‑1 (MQ=255)
ggtgATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGCGTTAGGGGTGGTTTTGTTTAATTTTTCAGTCAGACGCCAAAGCCTGTTATTCGGTGTTCA‑GGGGTTTTTTTTTTTTTTTTTCAACCACGTTTGTGGtgctccccatcccctttttttt > 2:559185/1‑218 (MQ=255)
atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTATGTTCAATTTTGCAGTCAGCCCCGAACGCCTGTTTTTCGGATTTCC‑TGGGGTTTTCTTTATTTTTTTGAA‑CACGGTTTTGGTTCTCCCT‑ACCCTACTTTTTTCttttt > 1:395322/1‑238 (MQ=255)
tgtttttccacttttaaCCGGGCTTTCCTTTTGCTCCGAAATGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGTAATGCCCGTTCTTGCGGCGGGCATGTCACGGTTAAGTTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGt < 2:547755/224‑1 (MQ=255)
tgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGTGTGTTTATGTTCCATTTTGCAGTCAGCCTCGAAAGCCTGTTATCAGGATTTCA‑GAGGGTTTTCTTTATTTTTTTTAA‑CACGGTTGTGGTGCCTCCT‑ATGCTACTTTTTGCtttttcgt > 1:553844/1‑235 (MQ=255)
tgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATCTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTTTCAGGATTTCA‑GTGGGTTTTTTTTATTTTTTTCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTTCTTTTC‑AGt > 1:846560/1‑239 (MQ=255)
tgaattactgcaatgacaaGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGt < 1:137622/221‑1 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTTTCCGGTTAAGGGGGGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCACGTTATCAGGATTTTA‑GTGGGTTTTCTTTTTTTTTTTCAA‑CACGGGTTTGGGTCCTCCT‑ACGCTACCTTTTGCTTTTT‑AGTTTcc > 1:874860/1‑238 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCCGTTAAGTGGTGTTTATGTTCAATTTTGCAGTCAGCCCCCCAAGCCAGTTTTTGTGGTTTTT‑ATGTGTTTTTTTTTTTTTTTTTAA‑CCCGGTTGGTGTTTCTCCT‑ACCCCACtttttttttttttttttcc > 2:50286/1‑222 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTCAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTATCCGTGTTCGGGGGGTTTTTGATTTAATTTGTGTGCAGCCGCGAGCAGCTGTTATCATGGTTTCA‑GTGGGTTTTTTTTTTTTTTTGCAA‑CCCAGGTGTTGGTCCTTCC‑ACGCGACCTTTTGTttttttcttgacccc > 2:137622/1‑228 (MQ=255)
cATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGGGTGTTTATGTTCAATTTTGCAGTCAGCCCCGCAAGCCTGGTATCAGGATTTTA‑GTGGTTTTTTTTTATTTTTTTCAA‑CACGGGTGTGGGTCCTCCT‑ACCCTTCTTTTTTCTTTTT‑ATTTGCCGCCAAg > 1:1004785/1‑239 (MQ=255)
ttGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCCATCTCCGGTTAAGGGGTGTTTTTGTTTAATTTTTCAGTCAGCCCCGGCAGCCCGTTATCAGGGTTTCA‑GTGGTTTTTTTTTATTTTTTTCAA‑ACCGGTTGTGGGTCTCCCA‑ACCCTCCtttttctttttttattggtccaaaca > 2:396082/1‑215 (MQ=255)
tGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAg < 1:3391/239‑1 (MQ=255)
tGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGCCATTCTCCCGTTAAGGGGGGTTTTTGTTCAATTTTTCAGTCCGCCCCGCAAACCTGGTTTTAGGGTTTTC‑GTGGTTTTTCTTTTTTTTTTTCAA‑CACGGTTTGGGTTCTTCCC‑ACGCTACTTTCTTCttttttttttccgccaagaa > 2:7850/1‑222 (MQ=255)
gAACGGGGCTTCCTTGTTGCGCCGAAAGTTCATTTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 2:925389/239‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:470345/239‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCAGAAAGGTCAATTTATCCTTAAACAGCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:554182/239‑1 (MQ=255)
aaCAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGc < 1:605772/238‑1 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAgg < 1:704122/100‑1 (MQ=255)
ttCCCTTTTGGGCCGAAAGGTCAATTTTTCCTTAAACATCAGCAGTAATCTGGCCCCTGAAATTCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 2:92191/239‑1 (MQ=255)
ttCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 1:85676/239‑1 (MQ=255)
tCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACg < 1:697797/238‑1 (MQ=255)
tccTTTTGCGCAGAAAGGTTCATTTATTCTTAAACATGAGCAGTGAGCTGGCCCCTGAAATGCCTGTCCGGGCGGCGGGAATTGTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCGGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCt < 2:775178/238‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCt < 1:559185/239‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCaaa < 1:615158/223‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGGTAAGGTGTGTTTATGTTCAATTTTTCAAGCAGCCGCGAAAGCCTGTTATCAGGATTTTC‑ATGGTTTTTTTTTATTTTTTGCCA‑CACGGTTTTTGTTCCTCCT‑ACGCCTCTTTCTTTTTTTC‑TTTTTCCGCCAAGAAACCTTCTTaacc > 2:1045171/1‑235 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:7850/239‑1 (MQ=255)
ttgccgccaaagtgaaaTTTTTCCTTAAACCTTCGCAGGTATCTGGCCCTCGTAATGCACCGCCTTTCGGGGGGCATTCTCCGGGTAAGGTGTTTTTATGTTCAATTTTGACGTCAGCCGCGAAAGCCTGTGATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTGCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGc < 2:579550/224‑1 (MQ=255)
tGCGCCGAAAGGTCAATTTATCCTTAAACGTCAGCCGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCa < 1:688991/239‑1 (MQ=255)
ccGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCGTTCTCCGGGTAAGGTGTGTTTATTTTCAATTTTGCAGTCCGCCACGAAAGCCTGTTTTCGGGTGTTCA‑GTGGGTTTTTTTTTTTTTTTGTAA‑ACCGGTTTTGGTTCCTCCTCCCGCT‑CTTTTTGCTTTTC‑TCTTTGCCCAAAATAACGTCCTTACCCTCAcagaaaaa > 2:411910/1‑232 (MQ=255)
gTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACttt < 1:289285/185‑1 (MQ=255)
cAATTTTTCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 2:1092961/238‑1 (MQ=255)
aattttACCCTTAAACATCCGCAGTAATCTGGCCCCTGCAATGCCCGTCCCTGCGGCGGGCACTTTCCGTTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTCCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 2:885374/235‑1 (MQ=255)
ttttCCTTAAACACCAGCAGTAATCTGGCCCCTTCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑Ta < 2:725586/236‑1 (MQ=255)
cTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCa < 1:464915/239‑1 (MQ=255)
ccccTGCAATGCCCGTCCTTGCGGCGGGGATTTTCCGGTTAAGGGGTGTTTATTTTCCATTTTGCCGTCAGCCCCCAAAACCTGTTATTAGGGTTTTC‑GTGGTTTTTTTTTTTTTTTTTACA‑CACAGTTTTGGGTCCTCCT‑ACCCTCCTTTCTTCTTTTT‑TGTTTCCGCCAAGAAGCCTCCTTTCGCTCCCCCAAAATGTTTTTTTTTCTTACCGC‑CCGGCCGGCtttcccccagaggt > 2:1069002/1‑227 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGGTGAGGTGTGTTTATGTTCAATTTTGCAGGCCGCCGCCCACGCCCGTTTTCAGGCTTTTA‑GGGGGTTTTTTTTTTTTTTTTCAA‑CCCGGTTGTGGTTCCTCCT‑CCGCTACTTTCTTCTTTTT‑CGTTTCCGCCAGTTTACCTCCTTTCGCCCCCGCCCTATTCTTTTTTTTC‑TCCCGCACTGGcccctcttcctcagacgcatttc > 2:291846/1‑218 (MQ=255)
tGCCCGTCCTTGCGGCGGGCATTCTCCGGGTAAGGTGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTTTTTATTTTTTGCAA‑CACGGTTGTGGGTCCTCCT‑ACGGCAATTTCTTCTTTTCTATTTTCCG‑AAAGTAGCCTCCTTACGCCCCCGCCATATGTTTTTTTTTC‑TCCCCCACTGGCCCGCTTCCCACACGCGTTTTGTGGGCa > 2:1037270/1‑239 (MQ=255)
tttttGGGGGGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCATTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 2:846560/236‑1 (MQ=255)
ccTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:100399/239‑1 (MQ=255)
tttGGGGCGGGACTTCTCCGTTTATGGTGTGTTTATGTTCAATTTTTGAGGCAGCCGCTAAGGCCTGTTATCGGGATTTCA‑GGGTTTTTTCTTTATTTTTTGCAA‑CACGGTTGGGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:553844/238‑1 (MQ=255)
tctgcgtggggacttCTCCGGTTAAGGTTTGTTGTTGCTCAATGTTGCAGTCGGCCGCGAAAGCCTGTTATCAGGATTTCA‑GGGGTTTTTCTTTATTTTTTGCAA‑CCCGGTTTGGGTTCCTCCT‑ACGCTCCTTTCTGCTTGTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCGGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:430533/226‑1 (MQ=255)
ctggcggcgGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTAGTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:958184/236‑1 (MQ=255)
cTTGCGGCGGGGCTTTTCCGGGTAAGGTTTTTTTTTTTTTAATTTTGCATTCAGCCGCGAAAGCCTTTTATCAGGTTTTAA‑GTGGTTTTTTTTTATTTTTTTCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:1004785/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTTTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 2:835425/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTTCTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1094925/239‑1 (MQ=255)
cTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:917377/239‑1 (MQ=255)
cTTGCGGCGGGCATTCCCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCTCGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1045171/239‑1 (MQ=255)
cTTGCGGCGGGCATTCCCCGGTTAAGGTGTGTTTATGGTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGTTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:765296/239‑1 (MQ=255)
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CGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGG‑AATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGT‑ATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCATTCTCCGGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCA‑GTGGTTTTTCTTTATTTTTTGCAA‑CACGGTTGTGGTTCCTCCT‑ACGCTACTTTCTGCTTTTC‑AGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGC‑TACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCG > NC_000913/540310‑540769
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
