Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
540,546 |
C→T |
11.6% |
intergenic (+38/‑19) |
allB → / → ybbY |
allantoinase/putative uracil/xanthine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 540,546 | 0 | C | T | 11.6%
| 264.6
/ 4.3
| 124 | intergenic (+38/‑19) | allB/ybbY | allantoinase/putative uracil/xanthine transporter |
| Reads supporting (aligned to +/- strand): ref base C (37/68); new base T (13/2); total (53/71) |
| Fisher's exact test for biased strand distribution p-value = 3.48e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 131 total aligned reads displayed.
TTCGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGA > NC_000913/540308‑540779
|
ttCGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑tc < 1:1055972/239‑1 (MQ=255)
cGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑tct‑c < 1:96430/239‑1 (MQ=255)
cattcaGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTTCCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTa < 1:378437/239‑1 (MQ=255)
cattcaGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCACCAGTAATCTGGCCCCTGCAATGCCCGCCCTTGCGGCGGGC‑AA‑tcctcgggta > 2:579687/1‑231 (MQ=255)
caatcaGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATAGCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTa < 1:1266443/236‑1 (MQ=255)
ccGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCTTCCTTTCGGGGGGA‑CT‑TTT‑CC‑CGTTaatggggg > 2:378437/1‑233 (MQ=255)
ccGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TTT‑CC‑GGTTTAG‑gggtg > 1:40282/1‑239 (MQ=255)
aTAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGCAATCTGGCCCCTCCAATGCCCGTCCTTGCGCCGGGC‑AG‑TAT‑CC‑gctgagagggggtttt > 2:388235/1‑224 (MQ=255)
tAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAACCATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑GT‑TCT‑CC‑GGTGAAG‑GTGTGCTTAt > 1:823784/1‑239 (MQ=255)
cagcTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATAAGCCGTAATCTGGCTCCTGCAATGCCCGTCCTTGCGGCGGG‑‑AC‑TCTCCC‑CGTTAAG‑gtgggggtttttt > 2:1009880/1‑229 (MQ=255)
agcTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑t‑t < 1:1278883/238‑1 (MQ=255)
tttGTTTTTTCCAATTACGGTTTGGAATATCGCCCCAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑t‑t < 2:278132/233‑1 (MQ=255)
ttCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑tct‑c < 1:168195/210‑1 (MQ=255)
tACCAATGGCGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGt < 1:579687/239‑1 (MQ=255)
aCCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGTCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TTT‑CC‑CGTTATG‑GGGTGGTTTTG‑T‑TTCATTTTTCa > 1:997764/1‑236 (MQ=255)
tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCACTTTATCCTTAAACATCAGCAGTATTCTGGCCCCTGCAATGACCGTCCTTGCGGCGGGG‑AT‑TTTCCC‑GGTTATG‑GAGGGTTTTTG‑tctcattttcgcggaagcg > 2:305822/1‑221 (MQ=255)
tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAACCATCAGAAGTAATCTGGCCCCTCCAATGCCCGTCCTTGCGGCGGGG‑CT‑TGA‑CCAGGTAAAG‑GTGGGtttttttttattttcagaacaacc > 2:209131/1‑217 (MQ=255)
tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCCGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TTC‑CC‑CGGTAAG‑GGGGGTTTTTG‑T‑TCAATTTTGCGGT‑cgacc > 1:1317139/1‑234 (MQ=255)
tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TAT‑CC‑GGTTAAT‑GTGGGGTTCTT‑T‑TCCACTTTTCAGtgcgcc > 1:51650/1‑233 (MQ=255)
tGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGGAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATCTCC‑CC‑GGTTAGG‑GGGGGTTTATG‑‑‑TCAAttttttcttaccca > 2:78156/1‑228 (MQ=255)
cGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTTCGGCGGGC‑AT‑TTT‑CC‑GGTTAAG‑GTGGGGTTATG‑T‑TTAAtttttcgttgaaccgcca > 1:693047/1‑225 (MQ=255)
gATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTACG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGaa < 1:960318/239‑1 (MQ=255)
tCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGCAATCTGGCCCCTGCAATGCCCGTCCTTTCGGCGGGG‑AC‑TTT‑CC‑GGGTATG‑GGGGGTTTTTA‑TGTCAAttttcgaaaagccccgaaa > 2:779106/1‑223 (MQ=255)
acTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑c < 1:1378120/227‑1 (MQ=255)
cTGGAATTTCCCCACAAACTCACCCCTTTTGTTTGCCGTACCATTGGCGGGCGTAGCACGAAAACCATCTTACGTGGTTATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGACGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑Gc < 2:693047/239‑1 (MQ=255)
cTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAACACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑Gc < 1:199321/239‑1 (MQ=255)
aaccccACAAAGTCAGCCCGTATGTTGGCCTTTCCATTGGCGCGCGTATCCCGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCTCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTAt < 1:1009880/235‑1 (MQ=255)
cGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑CT‑TCT‑CC‑CGTTTAA‑GGGTGTTTTTG‑T‑TTAAATTTGCCAT‑CAGACCCCCAAA‑Gccgtttaca > 2:962702/1‑232 (MQ=255)
cGCCACAAAGTCAGCCCGTATGTTCGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTTAGTGTGGGTTT‑TG‑G‑TCAATTTTGCAGtacgacgggcaagcccgtgttca > 1:73907/1‑217 (MQ=255)
ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TTT‑CC‑CGTTTAG‑GGGTGTTTATG‑T‑TCAATTTTTCGGG‑CAG‑CCGCGGAA‑ACCCGTTTTCC‑gg > 1:372403/1‑239 (MQ=255)
ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCTAT‑TTC‑CC‑GGTAAAG‑G‑GGGGTTATG‑T‑TCTATTTTGACGT‑CGG‑CCGGGAGA‑AACTGTTAttcga > 1:429436/1‑235 (MQ=255)
aGTCACCCCTTTTTTTGGCCGTACCCTTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCa < 2:478623/239‑1 (MQ=255)
gCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑gt < 2:854873/181‑1 (MQ=255)
gCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑gt > 1:854873/1‑181 (MQ=255)
gCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGGGTTTTTT‑G‑TCAATTTTGCAGTCCAC‑CCGC‑AAA‑GCCCGttgtacggggttcaggggg > 1:1233793/1‑222 (MQ=255)
ggCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TCT‑CC‑CGTTAAG‑GTGGGTTTATG‑T‑TCAATTTTTCAGT‑CAG‑CCCCGGAA‑ACCCGTTATAA‑GGCTTTTAGT‑GGTGTTTCtttttt > 1:729088/1‑239 (MQ=255)
gTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTTTG‑T‑TCAATTTTTCAGT‑CAG‑CCGCGCAA‑ACCCGGTATCA‑GGATTTTTGG‑TGGTTTTCtttttttttt > 1:997606/1‑239 (MQ=255)
ttccgttgggcggcgTATTCCAAAAACCATCTTACGTGGTTATTTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTg < 2:1350423/227‑1 (MQ=255)
tccctttgggcggcgTATCACGAAATCCCTCTTACGTGGTGAGGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTg < 2:75173/227‑1 (MQ=255)
tccATTGGGGCACGTATCACGAAAATCAACTTACGTGGTGATTGGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTg < 1:518518/237‑1 (MQ=255)
aCCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑tct‑c < 2:325295/154‑1 (MQ=255)
tttgcgcgcGTATTCCGAAAACCCTTTTGCGTGGTTGTGTGGATTACGACATTGAACAGGGGTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAACCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAaca < 2:394844/236‑1 (MQ=255)
tgggcggcgTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGCCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAacac < 2:862854/233‑1 (MQ=255)
tGGCGCCGGTTTCAAGAAAACCATTTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAacac < 2:729088/239‑1 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGGTCAG‑GGGTGTTTATG‑T‑TCCATTTTGCCGT‑CAG‑CCGCGAAA‑GCCTGTTATCG‑AGGTTTTTGT‑GGTTTTTCTTTATTTTTTGCCACAAGGttt > 1:679891/1‑238 (MQ=255)
cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AA‑TCT‑CC‑CGGTAAG‑GGGGGGTTATG‑G‑TCAAATTTTCAGT‑CAG‑CCCCGAAA‑GCCTGTTTTTA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAAAACGGGtg > 1:950964/1‑239 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑AT‑TCT‑CC‑GGTTAGA‑GGGGGTTTATG‑T‑TTAATTTTGCAGT‑CAC‑CCCCGCAA‑GCCTTTTTTTC‑GGGTTTCTGTGGGTTTTTTTTTTTTTTTTTCAACAGGGtgtg > 2:406543/1‑236 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TTC‑CC‑GGGTAAG‑GGGGGGTTTTGTT‑TCATTTTTGC‑GT‑CAG‑CCCCGAAACGCCTTTTTTCG‑GGTTTTAGGG‑GGTTTTTTTTTTTTTTTTGAAAAAGGGTtgg > 2:1156894/1‑238 (MQ=255)
cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTTAG‑GGGGGTTTATG‑T‑TCCATTTTTCCGT‑CAG‑CCGCGCAA‑GACCGTTATCA‑GGGTTTTAGT‑GGTTTTTCTTTTTTTTTTTCTACACCGGtgtg > 1:65955/1‑239 (MQ=255)
aTCCCGAAAACCCTCTTGCGGGGGGATGTTATTTTCGGCATTTAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGtt < 2:1272716/239‑1 (MQ=255)
cccGAACACCATCTTTCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTTTTGCGCGGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTtcc < 2:674317/237‑1 (MQ=255)
cccATTTTTCCTGGTGATGTGATTTACGACATTGAACGGGGCTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 2:657563/238‑1 (MQ=255)
aCCATTTTACGTGGTGATGTGATTTACGGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:220315/239‑1 (MQ=255)
aCCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:1029272/239‑1 (MQ=255)
aTCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGCAA‑GACTGTTTTCC‑GGGTTTCCTT‑GGTTTTTCTTTATTTTTTGTAAAACGGTTGTGGTTCCTCCCACGcc > 1:1261000/1‑237 (MQ=255)
ttACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAGACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GGGTGTTTATG‑T‑TCAATTTTTCAGG‑CAG‑CCGCGAAA‑GCCTGTTATTT‑GGATTTCAGG‑GGGTTTTCTTTTTTTTTTTCAACAAGGTTTTGTGTCCTCCTACGGCACtt > 2:531921/1‑239 (MQ=255)
tcctgggtgggttgttttACGACTTTGAACGGGGCTTCCCTGTTGCGCCCAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACttt < 2:1252467/224‑1 (MQ=255)
ggtgATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TCT‑CC‑GGTTTAG‑GTGTGGTTTTG‑T‑TCAATTTTTCCGT‑CAG‑CCGCGAAA‑GCCTGTTTTCT‑GGGTTTCAGT‑GGGTTTTTTTTTTTTTTTTCAACCCGGTTTTGTTTTCCCCCCCGCCACTTTCTgtt > 2:701133/1‑237 (MQ=255)
gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGGTAAG‑GGGTGTTTTTG‑T‑TCAATTTTGCAGT‑CAG‑CCCCGAAA‑GCCCGTTATCA‑GGATTTACGT‑GGGTTTTCTTTATTTTTTTCAACACGGGTTTGGGTCCTCCTCCCCGACTTTCTGCtt > 1:1080003/1‑239 (MQ=255)
atgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTtcctc < 1:934171/218‑1 (MQ=255)
tgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TCT‑CC‑GGTTTAG‑GGGTGGTTATT‑T‑TTAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGGTATCA‑GGATTTCAGT‑GGTTTTTTTTTATTTTTTTCAACACCGGTGTGGTTCCTCCTACCCTACTTttttcttttcc > 1:32387/1‑238 (MQ=255)
tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑CGTTAAG‑GTGGGTTTTTG‑T‑TCAATTTTTCAGT‑CAG‑CCCCGAAA‑GCCCTTTATCA‑GGGTTTTCGT‑GGGTTTTCTTTTTTTTTTTCAACACGGTTTGTGTTCCTCCTTACCTTCTTTCTTTTTTTCAGTTTcc > 1:414693/1‑238 (MQ=255)
cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGt < 1:1364628/203‑1 (MQ=255)
cATTGAACAGGGCTTCCATGTTTCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa < 1:1005280/236‑1 (MQ=255)
gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:406543/239‑1 (MQ=255)
gAACAGGGCTTCCCGGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTTCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc < 1:527335/239‑1 (MQ=255)
ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCTCCC‑GGTTAAG‑G‑GTGGTTATT‑T‑TCCATTTTTCCGT‑CAG‑CCGCGAAA‑ACCTGTTATCAGGGATTTC‑GT‑GGGTTTTTTTTTTTTTTTTCACACCGGTTGTGGTTTCCCCTACCCTCCTTTTTTCtttttcgtttgcccaaaagaccctgct > 2:583211/1‑215 (MQ=255)
tcTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCt < 1:538914/236‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TTT‑CC‑GGGTTAG‑GGGGGTGTATT‑T‑TTCATTTTGCAGT‑CAG‑CCGCCGAA‑GCCTGGTTTCA‑GGATTTTATG‑GGTTTTTCTTTATTTTTTGCAACACGGGTGGTGTGTCTCCCACGCTCCTTTCTTCTTTTCAGTTTCCGCCAAAGAGCCCCCTTACGc > 2:1197987/1‑238 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TCT‑CC‑TGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCCGT‑CAG‑CCGCGGAA‑CCCTGTTATAA‑GGGTTTCTTG‑GGTTTTTTTTTTTTTTTTTCAACACGGTTGTGGGTCTCCCTCCGCTACTTTTTTCTTTTTTGTTTTCGCACAGGAGcactcttaccc > 2:495442/1‑228 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTa < 2:1053747/92‑1 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTa > 1:1053747/1‑92 (MQ=255)
cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GGGGGGTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTTGTATCA‑GGATTTCCGT‑GGGTTTTCTTTTTTTTTTTCAACACGGTTTGGGTTCTCCCTAGCACACTTATTTCTTTTTAGTTTCCGCAAAGTAGcgcgtttaacc > 2:679232/1‑228 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATTCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:305822/239‑1 (MQ=255)
ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:661808/239‑1 (MQ=255)
ccTGTGGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc < 1:388235/239‑1 (MQ=255)
cTGTTGCGCCCAAAGTCTAATGTTTTCTTGAACATCAGCAGTAGTCTGGACCCTGAAATCCCCGTCGCTCCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTACG‑T‑GGAATTTTGCAGT‑CAG‑GCGCGAAA‑GCCTGGTATCA‑GGATTTCCGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTCGCCGCAAAGTAGCCTGCTTACGCTCa < 2:1052035/239‑1 (MQ=255)
ttGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CT‑TCT‑CC‑GGTTCAG‑GTGTGTTTTTG‑T‑TCAATTTTGCAGG‑CCG‑CCGCGCAA‑GCCCGTTTTCA‑GGTGTTCAGT‑GGTTTTTCTTTTTTTTTTTCAACCCGGTTGTTGTTCCTCCTCACCTCCCTTTTTCTTTTTAGTTGCCCCCAAAGAGTCTCCTTACGCCCACGc > 2:1374872/1‑239 (MQ=255)
taaTTTATCCTTAAACTTCAGCAGTAATCTGGCCCCTGCAATGCCCGTGCTTGCGGCGGGC‑AT‑TCG‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:836241/237‑1 (MQ=255)
cAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt < 1:160095/238‑1 (MQ=255)
cTTAACCCTCAGGAGTAATCTGGCCCCTGGAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCATTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:1346637/239‑1 (MQ=255)
cTTAAACCTCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑TT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATT‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:779106/239‑1 (MQ=255)
cTTAAACAGTAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:203772/239‑1 (MQ=255)
attattcgggCCCCTGCAATTCCCGTCTTTCGGGCGGGC‑AT‑TTC‑CC‑GGTTAAG‑GTGGGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt < 2:1267629/228‑1 (MQ=255)
tAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCC‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTGCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAata < 1:732519/205‑1 (MQ=255)
aaTTTGGCCCCTGCATTGCCCGTCCTTGCGGCGGGC‑CT‑TCC‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCg < 2:128078/236‑1 (MQ=255)
agttGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa < 1:677710/219‑1 (MQ=255)
tCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAg < 1:317415/239‑1 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTTTG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTTCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTTTTGCTACCGCACCGGCCTGCTTCGCTCAGGCGgttttc > 1:826301/1‑237 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TTCATTTTTCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGGTTTCAGT‑GGGTTTTCTTTATTTTTTGCAACACGGGTGTGGTTCCTCCTACGCTCCTTTCTGCTTTTTTGTTTCCGCCAAGAAGCCTGCTTACGCTCACCCCATATGCTTTTTTTTCTACCGCACTGGCCTGCTTctttctcttaaaaaa > 2:677710/1‑224 (MQ=255)
tGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACg < 1:241919/140‑1 (MQ=255)
tGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CCGGGTTAAG‑G‑GGGGTTATG‑T‑TTCATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGGTATCA‑GGGGTTCAGT‑GGTTTTTTTTTATTTTTTTCCACACGGGTTTGGGTCCTCCTACGCTACTTTCTTCTTTTTAGTTGCCCCACAGTAGCCCGCTTACTCTCCCCCACTAAGCTTTTCTTGTTCCCCCACCGGCCCGCTTCGCTCCGGCGgttttctggc > 2:213432/1‑232 (MQ=255)
gTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GGGTGGTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCCCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgt > 1:350094/1‑238 (MQ=255)
tCCCTGCGGCGGGC‑AT‑TCT‑CG‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCATCACGGTTGTGGTTCCTCCTACGCTACGTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg < 1:150251/239‑1 (MQ=255)
ccTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTTTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:422194/239‑1 (MQ=255)
ccTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCCGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc < 1:640780/239‑1 (MQ=255)
cttggcgcggGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTTTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:1004925/233‑1 (MQ=255)
cTTGCGGCGGGC‑CT‑TGT‑CC‑GGTTTAG‑GTGTGTTTATG‑T‑TCAATTGTGCAGT‑CAG‑CCGCGAAA‑GCCTGGTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:407384/239‑1 (MQ=255)
cTTGCGGCGGGC‑AT‑TTT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:213432/239‑1 (MQ=255)
cTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg < 1:583211/239‑1 (MQ=255)
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TTCGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AT‑TCT‑CC‑GGTTAAG‑GTGTGTTTATG‑T‑TCAATTTTGCAGT‑CAG‑CCGCGAAA‑GCCTGTTATCA‑GGATTTCAGT‑GGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGA > NC_000913/540308‑540779
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
