Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F17 I0 R1 160 98.0 2214160 89.0% 1970602 222.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,619,521 A→C 13.5% T134T (ACA→ACC)  marR → transcriptional repressor of multiple antibiotic resistance

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,619,5210AC13.5% 197.5 / 2.9 82T134T (ACA→ACC) marRtranscriptional repressor of multiple antibiotic resistance
Reads supporting (aligned to +/- strand):  ref base A (39/28);  new base C (5/8);  total (44/38)
Fisher's exact test for biased strand distribution p-value = 2.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGCCG  >  NC_000913/1619284‑1619755
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                          
ttcTCCGGTTGAACTGAAAAAGGTATTGGCGGTCGGCCTGGGAGCACTGACCCGTACGCGGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAacac                                                                                                                                                                                                                                           <  1:475221/237‑1 (MQ=255)
     cGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCAATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGCCGAATTGGCAACACttacg                                                                                                                                                                                                                                      >  1:725996/1‑236 (MQ=255)
        ttGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCCCTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTa                                                                                                                                                                                                                                    <  1:910527/238‑1 (MQ=255)
         tGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTAt                                                                                                                                                                                                                                   <  1:215793/238‑1 (MQ=255)
         gaagctgggaaaGGTATTGCCGGTGGACCGGGGAGCACGGGCCCGGATTAGGGACAGCCTGGTCTGTAAAGGCTGTGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTAACACGGGCGGCGCGGCAATATGTGCACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAGAACCTGACGGCGGACGAAGTGGCAACACTTGAGTaa                                                                                                                                                                                                                                   <  2:47841/229‑2 (MQ=255)
          gagcTGAAAAAGGTATTGTCGGCCGACATGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGCCCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTAtt                                                                                                                                                                                                                                  <  1:661714/235‑1 (MQ=255)
            aCTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTAttt                                                                                                                                                                                                                                 >  1:81081/1‑237 (MQ=255)
                          tGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGGATTTGCTTAAGAAAGTCCt                                                                                                                                                                                                                  >  1:926169/1‑238 (MQ=255)
                             cggtcgACCGGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGcc                                                                                                                                                                                                               <  1:829831/238‑1 (MQ=255)
                                          aacACTGACCGTTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAag                                                                                                                                                                                                  <  1:125465/236‑1 (MQ=255)
                                              cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCCA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGCCGCAGAAGCACCCCCTGAAGATTTTCTTAAAAAAGTCCCGCCCTAAAAAAAAAAAAGGTa                                                                                                                                                                                             >  2:683852/1‑239 (MQ=255)
                                              cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAggaa                                                                                                                                                                                             >  1:451648/1‑237 (MQ=255)
                                              cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGGGGCCACACTTCATGATTTTCTTAAAAAAATCCTGCCGAAAACAAAAAAAAggaa                                                                                                                                                                                             >  2:918693/1‑237 (MQ=255)
                                                 aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACCCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAACCAAAAAAAAGGAATg                                                                                                                                                                                           >  1:232223/1‑238 (MQ=255)
                                                 aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGAATTTGCTTAAGAAAGTCCTTCCGGCAAACAAAAAGAGGTAtca                                                                                                                                                                                          >  1:880968/1‑237 (MQ=255)
                                                         gctgggctgtcTGGTTTGTAAAGGCTGGGTGG‑AAAGGTTGCCCAACCCGAATGACAAGCGGAGAGTACTGGTAAACCTTACCACGGGGGGCGCGGCAATATTGTAAAAATGCCATCAA‑TTAGTGGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACGCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTcc                                                                                                                                                                                  <  2:922165/229‑1 (MQ=255)
                                                             gATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGAGGCAACCCTTGAGAATTTGCTTAAGAAAGTCCGGCCGTAAACAAAAAAAAgggaatcagatatccaaac                                                                                                                                                                              >  2:708278/1‑222 (MQ=255)
                                                             gATCGCCTGGTCTGTAAAGGCTGGGCGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTAATGGTAAAACTTAACACCGGCGGCGGGGCCATATGTGACCAATGCCATCAA‑TTAGTTGGCCCGGACCTCCACC‑‑‑AAGGATTAAAAAACAACCTGCAGGAGGGCAACGGGGAAACACCTTAGCATTTCTTTAAAAAAGACCTACCGGAAACAAAAAAAAggagtcacactttcacaac                                                                                                                                                                              >  2:231882/1‑222 (MQ=255)
                                                             gATCGCCTGGTCTGTAAAGACTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAGACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACCCAGAAGAATTAACAAAAAACCTGACGGCGGCCGCAGTGGCAAAACTTGAGGAATTGCTTAAAAAAATCCCGCCCTAACAAAAAAAAAAGGATGAGGAGGTCCa                                                                                                                                                                                 >  2:427058/1‑239 (MQ=255)
                                                               tCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACg                                                                                                                                                                             <  1:812716/238‑1 (MQ=255)
                                                                  ccTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCCGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAAt                                                                                                                                                                         >  1:631821/1‑239 (MQ=255)
                                                                     ggTCTTGAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGGGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:1098761/239‑1 (MQ=255)
                                                                     ggTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAACCTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:20345/239‑1 (MQ=255)
                                                                      gtttgggaaagtcgggTGGAAAAGTTTCCCGAACCCAAATAGCAACAGGGTGGTGATGGAAAATCTTACCACCGGCGGGGTAGCAATATTGGAAAAATGCCATCAA‑TTAGTGGGCCAGGACATGCGCC‑‑‑AAGAATTAACAAAAAACCTGACTGCGGACGAAGTGGCAACCCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGTTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  2:232223/226‑1 (MQ=255)
                                                                      gTCGGTAAAGGCTGGGGGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:562675/238‑1 (MQ=255)
                                                                        tgtacaggggggggggg‑AAAGGTCGCCGAACCCGAAGAAAAAGCGGGGGGGAGTGGAAAAACTTACCCCCGGGGGCGGGGAAATATGGGAACAATGCCATCAA‑TTAGTGGGCCAGGACCTGCACC‑‑‑AAGAATTAAAAAAAACCCGGACGGCGGACGAAGTGTCAACACTGGAGTATTTGCGTAAGAAAGACCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGa                                                                                                                                                                    <  2:879011/227‑1 (MQ=255)
                                                                        cTGTAAAGGCGGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGGGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACCAAGAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTGGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:427058/239‑1 (MQ=255)
                                                                            aaaGGTGGGGGGG‑AAGGGTGGCCGAACCGGAAGTACAAGCGCGGCGTCTCGGTAAAACTTCCCACGGGCGGCGCGGAAAAATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AATAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATGTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTa                                                                                                                                                               <  2:572635/239‑1 (MQ=255)
                                                                             aaGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACCCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGAATGACCCTGTCCAGACGCAATACTGACGCTAt                                                                                                                                                              >  1:572635/1‑239 (MQ=255)
                                                                               ggCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTCCCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:809532/229‑1 (MQ=255)
                                                                                  cgggTGA‑AAAGGTTCCCGAACCCTAATGAAAAGGGCGGCGTTCTTGCAAAACGTGCCGCCGGGGGGGCGGCAATATCGAAACAAGGCCACCAA‑TTAGTTTGACAGGTCCTTCACC‑‑‑AAGAAGTAACAAAAAACCTGACGGCGAACAAATTGGAAAAACTGGAGTATTTGCTTAAGAAAGTTCTGCCGTAAACAAAAAAGATGTATGACGATGTCCAGACGCAATACTGACGCTATTAcc                                                                                                                                                          <  2:541168/237‑1 (MQ=255)
                                                                                   gggggg‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAATATTTGCTTAAGAAAGACCTGCCGTAAACAAAAAAGAGGAATGACGATGTCCAGACGCAATACTGACGCTATTACCAt                                                                                                                                                        >  1:801993/1‑239 (MQ=255)
                                                                                   gggTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGAAGAACGATGTCCAGACGCAATCATGACGCTATTACCAt                                                                                                                                                        >  1:566194/1‑239 (MQ=255)
                                                                                   gggTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGGGGCAACACTTGAGTATTTGCTTAAGAAAGGCCTGCCGTAAACAAAAAAAAGGAATGAAGAGTTCCAAAAGCaaaaacaacccaattaaaat                                                                                                                                                        >  2:726549/1‑221 (MQ=255)
                                                                                    ggTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACt                                                                                                                                                                      <  1:1050214/224‑1 (MQ=255)
                                                                                     gcgg‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATAAA‑TTAGTTGGCCAGGACCTGCACA‑‑‑AAGAATTAACAAAAACCATGACGGCGGACGAAGCGGCAACACTTGAATATTTTCTTACGAAAACCCGTCCGGAAACAAAAAAAAGGAAACAAGATGCCAAAACGCAAAAcacacaccaatacaaaaa                                                                                                                                                      >  2:517254/3‑222 (MQ=255)
                                                                                      ggg‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTg                                                                                                                                                                     <  1:570044/222‑1 (MQ=255)
                                                                                          aagggTTGCGGAGCCCGAATGGCAAGCGCGGCGTCCTGTTAAAACTTACCCCGGGCGGCGCGGTAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATa                                                                                                                                                   <  1:405349/235‑1 (MQ=255)
                                                                                          aaaGGTTGCCGACCCCGAATGAAAAGGGGGGGGTACTGGAAAAACTTACCCCCGGCGGGGCGGAAAAATGTGAAAAATGCCACAAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATa                                                                                                                                                   <  2:926169/238‑1 (MQ=255)
                                                                                          aaaGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACCCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAAAGGGATGAAGATGGCCAAACGCAATACTGAAGCTAATAcacttatctt                                                                                                                                                  >  2:809532/1‑230 (MQ=255)
                                                                                               ttGCCGAACCCGAATGACAAGCGCGGCTTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCAtt                                                                                                                                              <  1:726549/238‑1 (MQ=255)
                                                                                               ttGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGGGTATTTACTTAAGAAAATCCTTCCGGAAACAAAAAAACAGTAAGACCATGTCCAAACCCAAAACTGAAGccaatcactgacccttaaaaa                                                                                                                                             >  2:1050214/1‑219 (MQ=255)
                                                                                                     aaCCGGAATTAAAAGCGGGGGGTACTTGTAAAACTTCCCCCCGGCGGCGCGGCAATATGGAAACAATGCCATCAA‑TTAGTTGGCCAGGCCCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACt                                                                                                                                       <  1:683852/239‑1 (MQ=255)
                                                                                                      aCCCGAATGACAAGCGCGGCGTACTGGTAAAACTGACCCCCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACt                                                                                                                                       <  1:132111/238‑1 (MQ=255)
                                                                                                         cGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTCCCATTCATAGCATTTTGGACTggta                                                                                                                                   >  1:963123/1‑237 (MQ=255)
                                                                                                               aaaagggggcggttcTGGTAAAACTTCCCCCCGGGGGCGGGGCAATATGTAAAAAATGCCATCAA‑TTAGTGGGCCTGGCCCCGCACC‑‑‑AAGAATTAACAAAAACCCTGACGGCGGACGAAGTGGAAACCTTGGATTATTGGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGa                                                                                                                             <  2:859750/225‑1 (MQ=255)
                                                                                                                caagcgtgggttcgtGGTAAACCTTACCACCGGCGGCGCGGCAATATGTGAAAAAGGCCATCAA‑TTAGTTGGAACGGTCCTGGAAA‑‑‑AAGAATTAAAAAAAAAGATGAAGGAGGAAGAAGGGGAAAAAGGGGAGGAGGGGGTGAAGAAAGGAAGGAAGGAAAAAAAAAAGAGGGAGGAAGAGGTGAAGAAGAAATAGGGAAGATATTAAAATTAATAGAATTTTGGACTGGATAGAGGa                                                                                                                             <  1:231882/224‑1 (MQ=255)
                                                                                                                                 tAAAACTTCCCCCGGGGGGGGGGGAAATAT‑TGAAAAATTCCCACAATTTAGTGGGCCAGGACCTGCACA‑‑‑AAAAATTAAAAAAAACCCTGACGCCGACCGAAGTGGAAAACTTTGAGTATTTGCTTAAGAAGGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCAc                                                                                                            <  2:451648/238‑1 (MQ=255)
                                                                                                                                   aaaCTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGAATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCGGGAATCGcc                                                                                                              >  1:68368/1‑234 (MQ=255)
                                                                                                                                     aCTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGCATGACGAAGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGAAAAACTGGATTCGCCACTGTCa                                                                                                       >  1:242198/1‑239 (MQ=255)
                                                                                                                                        tACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCCTTTTGGACTGGATCGGGGCCAACCTGGAATCGcccacttcactg                                                                                                    >  1:459307/1‑229 (MQ=255)
                                                                                                                                          ccaccGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGTTGTCCAGACGAAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGCCAACCTGGAATCGCCACTGTCACTggg                                                                                                  >  1:932907/1‑238 (MQ=255)
                                                                                                                                            gccGGCGGCGGGGCAATATGTAAAAAAGGCCATCAA‑TTAGGTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACCCTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGgaga                                                                                                <  1:708278/238‑1 (MQ=255)
                                                                                                                                                                 gAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGtt                                                                           >  1:527308/1‑239 (MQ=255)
                                                                                                                                                                 aaaaaaTGCCATAAA‑TTAGTTGGCCAGGACCTGCACA‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGt                                                                            <  1:203755/234‑1 (MQ=255)
                                                                                                                                                                  aaCAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGGGAAAGTGTCAGAGCGTTCGTGtt                                                                           >  1:208865/1‑238 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACACAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAAACCCACCTGGCACTGGAAAAAAGGGCAGAAGGTTCGGGTAAATCCa                                                                     >  2:608914/1‑239 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGCTGTCCAGACGCAATACTGAAGCTATTACCATTCATAGCATTTTGGACTGGCTCCAGGACAACCTGGAATCCCCCCTGTCCCCGGGGAAAGGGTCACACGGTTCGGGttcaccca                                                                     >  2:111443/1‑233 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACg                                                                                                                                                                             >  1:514583/1‑135 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGgag                                                                                                 >  1:256702/1‑211 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGCAAGCGTACGAGCGGTCTGGtagttcca                                                                     >  1:424161/1‑232 (MQ=255)
                                                                                                                                                                       tGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGGTACTCCa                                                                     >  1:1004277/1‑239 (MQ=255)
                                                                                                                                                                        gCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCaa                                                                    >  1:831363/1‑239 (MQ=255)
                                                                                                                                                                               a‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATAAAAAAAAAACCTGACGGCGGACGAAGGGGCAACCTTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCAc                                                             <  1:608914/239‑1 (MQ=255)
                                                                                                                                                                                   taagggacAGGCCCTGCCCA‑‑‑AAGAATAAAAAAAAAACCGGCCGGCGGAGGAAGTGGCAACGTTGGAGTATTTGCTAAAGAAATTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTg                                                          <  2:3093/232‑1 (MQ=255)
                                                                                                                                                                                           aGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCCGAGCGTTCGGGGTACTCCAAATGGCACCTGAAACGGAt                                                  >  1:474079/1‑239 (MQ=255)
                                                                                                                                                                                                  gCACC‑‑‑AAGAATTAACAAAACACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGAATTTTGGACTGGATCGAGGACAACCTTGAATCTCCACTGTCACTGGAGGAAATGTCAAAGCGTTCGGGTTACTCCAAATGGCCCCTGCAAAGGAGGTTaaaa                                           >  2:1093605/1‑239 (MQ=255)
                                                                                                                                                                                                  gCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATa                                                                                                                                                   >  1:367106/1‑135 (MQ=255)
                                                                                                                                                                                                  gCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGa                                                                                                                             >  2:451030/1‑157 (MQ=255)
                                                                                                                                                                                                  gCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGa                                                                                                                             <  1:451030/157‑1 (MQ=255)
                                                                                                                                                                                                  gCACC‑‑‑AAGAATAAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATa                                                                                                                                                   <  2:367106/135‑1 (MQ=255)
                                                                                                                                                                                                          aaGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGTACCCTGCAACGGATGTTTAAAAAAGa                                      >  1:18112/1‑239 (MQ=255)
                                                                                                                                                                                                           aGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCCAATGGCACCTGCAACGGATGTTTAAAAAAGaa                                     >  1:942943/1‑239 (MQ=255)
                                                                                                                                                                                                           aGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGt                                                >  1:3093/1‑228 (MQ=255)
                                                                                                                                                                                                           aGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGAATCGAGGACACCCTGGAAACGCCACTGTAACTGGAGAAAGTGTCAGAGCGTTCCGGTTACTCCAAATGGAACCTGCAAAGGAGGTTTAaaaaaaaa                                     >  2:499963/1‑239 (MQ=255)
                                                                                                                                                                                                                tAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCgg                                >  1:575672/1‑239 (MQ=255)
                                                                                                                                                                                                                  aCAAAAAACCTGACGGCGGACGAAGTGGAAAACATTGAGGTTTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGtc                              <  1:1060092/239‑1 (MQ=255)
                                                                                                                                                                                                                   cAAAAACCCGGACGGGGGAGAAGGTGAAAAGATTTGAGTTTTTGCTAAAGAAAGCCCTGCCGTAAACAAAAAAGAGGTATGACTATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGtca                             <  2:527308/239‑1 (MQ=255)
                                                                                                                                                                                                                   aaaaaccccTGGCGGCGGACGAAGGGACAACATGTGGTTTTTTGCATAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGtca                             <  2:459307/232‑1 (MQ=255)
                                                                                                                                                                                                                             gACGGCGGACGAAGTGGCAACCCTTGAGTTTTTGCTTAAGAAGGTCCTGCCGTAAACAAAAAAGAGGTAGGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGGCTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGc                   <  1:800383/239‑1 (MQ=255)
                                                                                                                                                                                                                               cggcggACAAATGGGCAACCTTTGAATATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATTACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGcc                  <  1:431458/238‑1 (MQ=255)
                                                                                                                                                                                                                                  cggACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGGCTGGATCGAGGACAACCTGGAATCGCCCCTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCCAATGGCACCTGCAACGGATGTTTAAAAAAAAAACCGGGCCTTCCTTAGGCCAATa              >  2:800383/1‑239 (MQ=255)
                                                                                                                                                                                                                                              cAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGCCg  >  1:65015/1‑239 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                          
TACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGG‑AAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAA‑TTAGTTGGCCAGGACCTGCACC‑‑‑AAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAAACAAAAAAGAGGTATGACGATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGCCG  >  NC_000913/1619284‑1619755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A