Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I0 R1 92 125.0 2504412 98.2% 2459332 226.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,304,520 G→T 5.8% intergenic (+129/+586) eco → / ← mqo ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,304,5200GT 5.8% 221.2 / 4.2 79intergenic (+129/+586)eco/mqoecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
Reads supporting (aligned to +/- strand):  ref base G (35/39);  new base T (3/2);  total (38/41)
Fisher's exact test for biased strand distribution p-value = 6.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-01

GCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAG  >  NC_000913/2304283‑2304757
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                             
gcGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCg                                                                                                                                                                                                                                               >  1:234111/1‑238 (MQ=255)
 cGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCgg                                                                                                                                                                                                                                              >  2:782547/1‑238 (MQ=255)
  gTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCa                                                                                                                                                                                                                                            <  1:1027864/239‑1 (MQ=255)
   ttACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCa                                                                                                                                                                                                                                            >  1:851848/1‑238 (MQ=255)
           gCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAgg                                                                                                                                                                                                                                   >  1:1126308/1‑239 (MQ=255)
           gCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCCACGCTGGCGCGTCTTATCCGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAgg                                                                                                                                                                                                                                   >  2:1093284/1‑239 (MQ=255)
             atggtGCGGATGGTGGGGTATACGCAAACAAAGGGAGATGTGAAGTACCGCGTGTGGAAGGCGGAAGAGAAAGTTGACAAC‑GGGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGGGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAgg                                                                                                                                                                                                                                   <  2:1162411/233‑1 (MQ=18)
                 tGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGa                                                                                                                                                                                                                              <  1:906161/238‑1 (MQ=255)
                 tGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGAc                                                                                                                                                                                                                             >  1:789520/1‑239 (MQ=255)
                         gtggtgTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCCCCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGt                                                                                                                                                                                                                     <  1:901760/239‑1 (MQ=255)
                              gtATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCCCCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcg                                                                                                                                                                                                                 <  1:700480/238‑1 (MQ=255)
                                ataCGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgcc                                                                                                                                                                                                               <  1:431281/238‑1 (MQ=255)
                                  aCGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCa                                                                                                                                                                                                            >  1:48049/1‑239 (MQ=255)
                                       aGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCg                                                                                                                                                                                                        >  1:395767/1‑238 (MQ=255)
                                         aCAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACa                                                                                                                                                                                                     >  1:289023/1‑239 (MQ=255)
                                         aCAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGAc                                                                                                                                                                                                      >  2:1231543/1‑238 (MQ=255)
                                         aCAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGACACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCCCGTCTTATCAGGCCTACACCCCTGGGAAGTGCGCCCCCCCGTAGGTCCGACAAGGCGGGCAAGCCGCCTCCGCCa                                                                                                                                                                                                     >  2:724211/1‑239 (MQ=21)
                                             tGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCCCGCCGCATCCGACATCCa                                                                                                                                                                                                 >  1:648301/1‑239 (MQ=255)
                                             tGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCa                                                                                                                                                                                                 >  1:545338/1‑239 (MQ=255)
                                                  aTGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAcccc                                                                                                                                                                                                                                        <  2:812257/195‑1 (MQ=255)
                                                  aTGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCAcccc                                                                                                                                                                                                                                        >  1:812257/1‑195 (MQ=255)
                                                     tgAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGa                                                                                                                                                                                         >  1:1200256/1‑239 (MQ=255)
                                                     tgAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGCCAGACAAGGCGGTCACGCCGCATCCGCCATCCACCGCCCg                                                                                                                                                                                          >  2:770853/1‑238 (MQ=255)
                                                       aaGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGCACTCCAACCCCCGAg                                                                                                                                                                                        >  2:938968/1‑238 (MQ=255)
                                                       aaGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGGCACGCCGCATCCGACATCCAACGCCCGAg                                                                                                                                                                                        >  2:448838/1‑238 (MQ=255)
                                                           tccGCGTCGGGAAGGCGGAAGAGAAAATTGACACC‑GCGGTAGTCCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGCCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCg                                                                                                                                                                                     <  1:694440/236‑1 (MQ=255)
                                                             cgcgTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGAAGTGCGGCACCCCGTAGGCCAGACAAGGCGGTCACGCCGCATCCGACCTCCAACGCCCGAGCCGGtt                                                                                                                                                                                  >  1:57642/1‑238 (MQ=255)
                                                               cgTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTg                                                                                                                                                                                 >  1:125920/1‑237 (MQ=255)
                                                                gccTGGAGAGCGGAGGAGAAAACGGACAAC‑GGGGTGGTGCGCGAAACTGCC‑TGTAGAGCGGGCACCCCGC‑AGGCAGGACAAGGCGGGCACGCCGCTGCCAACAT‑CCAACCCCCGAGCGGGTTGCCTAATGCGACGCTGGCGCGGCTTAACAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGcc                                                                                                                                                                               <  2:559272/236‑1 (MQ=21)
                                                                    ggAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCCCGCCGCATCCGACATCCAACGCCCGAGCCAGTTGCCTGAt                                                                                                                                                                           >  1:594825/1‑238 (MQ=255)
                                                                          ggaaaGAGAAAATTG‑CAACGGAGGTGGTCCGCGAACCGGCCGGGACGCAC‑GCCCCCCCGC‑GGGGCAGGCAAGAGGGGGACGCCGCAGCCGGCAG‑CCAACGCCCGAGCGGGTGGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACg                                                                                                                                                                     <  2:125920/235‑1 (MQ=14)
                                                                          cGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGGGAc                                                                                                                                                                      >  2:566245/1‑237 (MQ=14)
                                                                          cGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACg                                                                                                                                                                     <  1:566245/238‑1 (MQ=255)
                                                                          cGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGTAACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACCCCCGAGCCGGTTGCCTGATGCGAc                                                                                                                                                                      >  1:814775/1‑237 (MQ=255)
                                                                              agagAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                                                                                                 <  1:1231543/238‑1 (MQ=255)
                                                                                  aaaaTTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGcgcg                                                                                                                                                             >  1:713991/1‑238 (MQ=255)
                                                                                    aaTTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGGTGCCTGGTGCGACGCTGGGGCGGCt                                                                                                                                                          >  1:1156257/1‑239 (MQ=255)
                                                                                       tGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCCCCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                       <  1:1238386/239‑1 (MQ=11)
                                                                                       ggACAAC‑GCGGTATTTCGCTAACCGGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                       <  1:843195/238‑1 (MQ=255)
                                                                                         aCAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCCGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGCGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                                                     >  2:110000/1‑239 (MQ=255)
                                                                                             c‑gcgGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                                                                                                                   >  1:1187521/1‑237 (MQ=255)
                                                                                                 gtgaGTTCGCTAAACTGCCGGGAAGGGC‑GGCACCCCGG‑AGGTCAGACAAGGCGGTCCCGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                                                                                                                                               <  1:1068799/235‑1 (MQ=255)
                                                                                                 gggaGTTCGCTAACCTGCCGGTAAG‑GT‑GGGCCCCCGTCGGGCCGGCCAAGGGGGCCACGCCGCACCCGACCT‑CCAGCGCCCGAGGCGGTTGCCTGATGCGACACTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                                                                                                                                               <  2:1187521/235‑1 (MQ=14)
                                                                                                   tAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTaca                                                                                                                                             <  1:392066/238‑1 (MQ=255)
                                                                                                   gggtggacgaagcggCCGTCAAGAGC‑GGCACCACGT‑GGGAAAGGAAAGTCGGCCAGGCCGGATCCGACAT‑CCAGCGCCCGAGCGGGTTGGCGGATGAGAAGCTGGCCCGTCTTAACAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGACTaca                                                                                                                                             <  2:1141119/224‑1 (MQ=14)
                                                                                                          cTAAACTGCCGTGAAGGGC‑GGCCCCCCGT‑GGGTCAGACAAGGCGGCCACGCCGCACCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtgtg                                                                                                                                     <  1:1006519/239‑1 (MQ=255)
                                                                                                                        agcgC‑GGCCCCCCGT‑AGGTCAGACAAGGCGCGCACGCCGCATCCTCCAA‑CCAGCGCCAGAGCCGGTTGCCGAAGGCGACGCTGACGCGTCGTATCAGGCCTAAACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAcccc                                                                                                                       <  2:713991/236‑1 (MQ=14)
                                                                                                                           gC‑GGCACCCCGT‑GGGTCAGAAAAGGCTGCCCCCCGGCATCCGACAG‑CCAACGCCCGGGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCg                                                                                                                      <  1:597078/237‑1 (MQ=14)
                                                                                                                            c‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAg                                                                                                                   >  1:298547/1‑239 (MQ=40)
                                                                                                                                 cccccggtgggcgagaaagggcggcCACGCCGCATCC‑ACATCCCAACCCCCGAGCGGGTTGCCTGATGCGACGCTGGCGCGTCTTTTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTc                                                                                                                <  2:1126308/220‑1 (MQ=14)
                                                                                                                                    ccGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGAt                                                                                                            <  1:782547/239‑1 (MQ=255)
                                                                                                                                     cGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTCAGACAAGGCGGTAACGCCGCATCCGACATCCAACGCCCGAACCGGTTGCCTGCTGCGCCGCTGGCCCGTCTTATCAGGCCTACACCGCTGGGAAGCGCTCCACCCCGCATGGCGGATa                                                                                                           >  2:904641/1‑239 (MQ=11)
                                                                                                                                             cAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCCCCCCGTAGGTCGGATAAGGCGGt                                                                                                    >  1:741532/1‑239 (MQ=255)
                                                                                                                                             cAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt                                                                                                    >  1:840899/1‑239 (MQ=255)
                                                                                                                                              aGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACCCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGCCACCCCGTAGGCCAGACAAGGCGGCGACGCCGCATCCGACATCCAACCCCCCACCCGGTTCCCTGACTCATCGCTGGCGGGTCCTCTCAGGCCCACACCGCTGTGAAGTGCCCCACCCCGTAGGTCCGCACAGGCGGtg                                                                                                   >  2:63220/1‑238 (MQ=11)
                                                                                                                                                 cAAGGCGGTCCCCCCGCCGCGGCCAG‑CGAACGCCCGAGCCGGTGGCCGGATGCGACGCGGGCGGGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTC‑TATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                                                                                                <  2:395767/238‑1 (MQ=14)
                                                                                                                                                 cAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                                                                                                <  1:523528/239‑1 (MQ=255)
                                                                                                                                                     gCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                                                                                            >  1:984807/1‑239 (MQ=255)
                                                                                                                                                          cACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGCGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgccccc                                                                                        >  1:494026/1‑234 (MQ=255)
                                                                                                                                                                    ccGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                                                                                                 <  1:300135/155‑1 (MQ=255)
                                                                                                                                                                               ccGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCgg                                                                   <  1:1060048/238‑1 (MQ=255)
                                                                                                                                                                               aCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                       >  2:300135/1‑155 (MQ=255)
                                                                                                                                                                                cggcgaggcaggtggcgcaaTGCGGCGCGGGCGCGTCGTATCAGGCCTAAACCGCTGTGAAGTGCGGCACCCCGTAGTTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCgg                                                                   <  2:15298/219‑1 (MQ=14)
                                                                                                                                                                                                   aTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTgg                                                <  1:1225416/238‑1 (MQ=40)
                                                                                                                                                                                                            tGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCGCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                      <  1:501738/239‑1 (MQ=255)
                                                                                                                                                                                                            tGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                      <  2:984807/239‑1 (MQ=40)
                                                                                                                                                                                                                    cTTATCAGGCCTACACCGGTGTGAAGTGCGGCACCCCGAAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                              <  1:58688/239‑1 (MQ=255)
                                                                                                                                                                                                                      tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTaca                            <  1:110000/239‑1 (MQ=40)
                                                                                                                                                                                                                       tagttcgcTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTaca                            <  1:1032982/231‑1 (MQ=12)
                                                                                                                                                                                                                       agcAGGCCCACACCGCGGTGAAGGGCGGCACCCCGTAGGGCAGACAGGGCGGGCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTaca                            <  2:524664/236‑1 (MQ=255)
                                                                                                                                                                                                                            gCCTGCACCGCTGGGAAGTGCGGCACCCCGTAGGTCAGACAAGGGGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCt                       <  1:557950/238‑1 (MQ=255)
                                                                                                                                                                                                                            gCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCCTCCGACATCTAACGCCCAAGCCGGTTGCCTTATGCGGCGCTGGCGCGGCTTATCAGGCCTACAcc                          >  1:1090040/1‑235 (MQ=255)
                                                                                                                                                                                                                               tACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGGTACGGCGCATCCGACATCTAACGGCCAAGCCGGTTGCCTGATGGGACGCTGGCGCGTCTTTTCAGGCCTACACCTCtgcgg                   >  1:698768/1‑236 (MQ=255)
                                                                                                                                                                                                                                accgcGCTGGGAAGGGCGGCCCCCCGTAGGTCAGAAAAGGCGGCCACGCCGCATCGGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                  <  2:545338/235‑1 (MQ=11)
                                                                                                                                                                                                                                acacCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                  <  1:448838/239‑1 (MQ=40)
                                                                                                                                                                                                                                      cTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCCTCCCACATCTAACGCCCCAACCCGGTGGCTGATGGGCCGCTGGCGCGCCTTTTCAGGCCCCCACCCCTGTGAAATGCt             >  1:739021/1‑238 (MQ=14)
                                                                                                                                                                                                                                      cTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCt             >  1:576770/1‑238 (MQ=40)
                                                                                                                                                                                                                                       tgtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTc            <  2:298547/238‑1 (MQ=40)
                                                                                                                                                                                                                                            aggtcGGCGCCCCGTAGGTCAGAAAAGGCGGTCAGGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAcccc      <  1:1093284/235‑1 (MQ=255)
                                                                                                                                                                                                                                            aGTGCGGCCCCCGGTAGGTCAGACAAGGCGGTCACGCCGAATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCGTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAcccc      <  2:1049699/239‑1 (MQ=255)
                                                                                                                                                                                                                                                cGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACCTCTAACGCCCAAGCCGGTTGCCTGATGCGGCGCTGGCGCGTCCTATCAGGCCTACACCGCTGTGAAGGGCTCCACCCCGTAg  >  1:1051433/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                             
GCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAAC‑GCGGTAGTTCGCTAAACTGCCGTGAAGTGC‑GGCACCCCGT‑AGGTCAGACAAGGCGGTCACGCCGCATCCGACAT‑CCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAG  >  NC_000913/2304283‑2304757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A