Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F4 I0 R1
|
65 |
125.5 |
2201552 |
98.4% |
2166327 |
263.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,708,758 |
G→C |
5.1% |
E614Q (GAA→CAA) |
rsxC → |
SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,708,758 | 0 | G | C | 5.1%
| 278.3
/ 2.6
| 107 | E614Q (GAA→CAA) | rsxC | SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base G (52/47); new base C (3/3); total (56/51) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.71e-01 |
Only 100 of 111 total aligned reads displayed.
GCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAG > NC_000913/1708471‑1709043
|
gCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCagaaga < 1:393002/289‑1 (MQ=255)
cccGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACGGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAgaagaa < 1:420471/289‑1 (MQ=255)
acgtaaaaTCATTACAGGAGGGGAGGCCCGTAAAGAGGAAGCGAGAGCCAATGAGACACAACTGCAGCAAACGAACAACGCAGCAACCGTTGCGGAACCACGTAAAACTGCAGCAGACGCAGGTATGGCCCGCTCCAACGCGCGCAAGCAGGCACGACAACAGGCTAATACCGAACCAGCACACCAGGTCGATCCGCGCAAACCCGCCGTCGAA‑GCCACTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACGGGCTAATGCGGAACCAGAAGAACAGGTCGAt < 2:121279/283‑1 (MQ=255)
gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑CACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATc > 1:310031/1‑288 (MQ=255)
gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATc > 1:803614/1‑288 (MQ=255)
gCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGCACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCCCGCCAGCTGG‑AACCGCCACACGCCAATGCCGAACCACAAGAACCAGTCGATcgc > 2:584852/1‑286 (MQ=25)
cAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGCTCcgc > 1:403282/1‑288 (MQ=255)
aaaTCATTGAACCCCGGGAAGCCCGTAAAGAGCAAGCCAGGGGGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTAATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCcgcg < 2:231380/288‑1 (MQ=255)
aaTTATTGCAGCACGGGAGGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGACCCACGTAAAACTGCCGTTGAAGCAGCTATCACACGCGCCAAAGCGCGCAAGCTGAAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGCAGAA‑GCCGCTATTACCCGTGCCAAAACGCGCAAGCTGG‑AACAGCAACCGCCTAATGCGCAACCATCAGAACAGGTCGATCcgcg > 1:271711/1‑288 (MQ=25)
ttattGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAC‑GCGGCTATTGCCCGGGCCAAAGCTCGCAAGGCGG‑AACAGCAACAGGCTACTGCCGAACCAGAAGAACAGGTCGATcacagcaa > 2:712640/1‑282 (MQ=25)
gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAGCCAGATGAACAGGTAGATCCGCGCAAAgcc > 1:785335/1‑288 (MQ=255)
gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgcc > 1:36275/1‑288 (MQ=255)
ggAAGGCCGTAAGCCGCGAGCAACAGCGAAACACGCACGACTGAAGCAAATTAAGGCGGCAGAACCCCCGGCTGACCCACGCAAAACGGCCGATCGAGGAGCGATTGCATGGGCCGAAGCGCGGAAACGGGAAAAGCAGCAGGCTAATGCGGAACCAGAACCACCTGTCGATCCGCGAAAGGCCGCCGTCGAA‑GCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGa < 2:266431/288‑1 (MQ=9)
aacccagTAAAACCCAAGCCAGAGGGAAACAGGAAGAACTGCAGGAAAATAACGACGCAGCAACCGTTGCTAATCCGCGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGGGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg < 2:1029183/282‑1 (MQ=18)
aaGCCCGTAAAGCTCAAGCCAGATCGAAACATGCAGAACTGCAGAAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCCCCCGAGCCAACGCGCGCAAGCTGGAACAACAACAGGCAACTGCGGAACCATAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg < 1:548200/288‑1 (MQ=21)
aGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCAACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc < 1:309167/288‑1 (MQ=255)
ggccggaagacggaaGACAGAGAGAAACAGGCAGAACTGCAGCAAAGTAAAGACGCAGCAACCGGGGATGATACAGAAAAAATTGCCGTAGAAGCAGCTATCGAACGCGCAAAAGCGGGCAAGCGGGAACAGCAACAGGCGAATGCGGAAGCAGAACCACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc < 2:730190/274‑1 (MQ=17)
tAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCACGCGGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGGGCAAAGACGCCCGCGTAGCCGCGAtt > 1:72135/1‑289 (MQ=255)
tAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGGTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCGGCTATTGCCCGTGCCAAAGCGCGCAAGCCGG‑AACAGCAACAGGCTCATGCGGACCCAGAAGAACAGGTCGCTCCACGCAAAGCGGCCCTTGACCACGCTAtt > 2:906811/1‑289 (MQ=21)
aGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGcc < 1:106385/289‑1 (MQ=255)
agCGAAACAGGCAGTACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCCCAAAGCCGCCGTCGAA‑ACCGCTATTTCCCGGGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCCAATTCGGAACCAGAAGAACAGGTCGCTCCGCCCAAAACGCCCGTCAGAGCCCCCATTTCACGAGCCaaccga > 2:955600/1‑285 (MQ=18)
agCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCAGCGCCAAAGc > 1:909703/1‑288 (MQ=255)
taggagggagagacaagacagaaatAACGACACAGCAACCGTTGCTGAGCCACGTAAAACGGCCGTTGAACCAGCTATAGCCCGCGCCCAACCGCGCAAGGTGGAACAACAACACGCAAATACGGAACCAGCACCACAGGTCGATCCACGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg < 2:654663/264‑1 (MQ=17)
gAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg < 1:659074/288‑1 (MQ=255)
gAAACAGGCAGAACCTAAGAAAACTAACGACGCAGAAACCGCGGCTAATCCAAGTAAAACTGCCGATGAGGAAGCTCGGGACGGGACCGACGCGGGCAAACAGGAACAGCAACAGGAAAATGCGGAACCAGCACACCAGGTCGATCCGCGCAAAACCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACg < 2:337655/288‑1 (MQ=17)
gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGGCCAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGACCCGCGCAAACCCGCCGTCGAAGCCGCAAGTGCCCGTGCCAAAGCACCAAAGCTgg > 2:541246/1‑289 (MQ=255)
cAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTACTGCCCGTGCCAAAGCGCGCAAACGGG‑AACAGCAACAGGCTAATGCGGACCCCGACAAACAGGTCGATCCGCGCAAAGCCGCCGACGAAGCCCCTCGTGCCCGTGCCGACGAACGCAAACCGGa > 2:147502/1‑289 (MQ=18)
cAGAACCGAAGCAGAATAACGCAGCACAAACCGCGGCAAAACCAGGTAAACCTGCCGTCGAAGAAGCCATCAACGTCGCAGAAGCGCCCAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGAGCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCt < 2:409526/286‑1 (MQ=14)
aaCTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑Ca > 1:171777/1‑289 (MQ=255)
cgaggagacaaaaaccgagacaaacactGCAGAACCACGTAAAAAGGCTGAAGAAGCGGCGAGCGCCCACACAAGAGGGAGGAAGCTGGAACAGCGTGAGGCTAGTGCCGAACCAGGAGACGCGGACGATCCAGGCAAAGCCGCCGTCGAG‑GACGCTATAGCCGGTAGCAAGGCACGCAAGCGGA‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCaa < 2:135101/262‑1 (MQ=9)
acagcaAAATGACGAGGCAGAGAACCTGGCTGATCCGCGGCAAGCCGCCGTCGAAGCCGCTATGTCCCGTGCCACAGCGCGCAAGCTGGAACAGAAACGGGCAAATACGGAGCCAGAACATGGTGTCGATCCACGCAAAGCCGCCGTCGAA‑GCCGCTATGCCCCGTGCGAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCCGAGCCAGAACCACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAA‑CAGCaa < 2:249212/288‑1 (MQ=14)
cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACCACAGGTCGATCCGCGCCAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCACGGCGCGCCAGCTGG‑CACAGCAAAAGGCTAATGCCACACCAGCAGCTCAGGTCGATCCGCGACAAGCCGCTGCCGAAGCGGACATTGCCTGGGACCAAGCACACAACCTGGAC‑AAGCaca > 2:414791/1‑287 (MQ=18)
cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCaa < 1:651772/288‑1 (MQ=255)
cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGC‑GAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGG‑AACAGCAACAGGCTAATGCCGAGCCAGAACAACCGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCCAACGGGAA‑CAGCAAcc > 1:330478/1‑288 (MQ=14)
tAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTCAt > 1:985637/1‑289 (MQ=255)
agggcgctccaACCCTGGCAGATCCACCAAAAACCGCCTCTGAAGAAACGATTACCGGCGCCAAAGCGCGCAAGCAGGAACAGAGACATGCAACTGCGGAAGCAGAACCCCGGGGTGATCCGCGCAAGGCCGCCGTCTAA‑GCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGc < 2:805665/280‑1 (MQ=14)
acgacgCAGCACCCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGTCTACTGCGGAACCAGAACAACAGGACGATCCGCGCAAAGCCGCCATCGAA‑GCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGc < 1:414791/289‑1 (MQ=255)
acgCAGCAACGGTGGCTGATCCACGTAACACTGCCGTTGAAGCAGCTAACGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGa < 1:532162/289‑1 (MQ=255)
cgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACTGGAA‑CAGCAACAGGCTAATGCCGa > 1:249212/1‑288 (MQ=255)
cagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa > 1:654663/1‑266 (MQ=255)
agacccGGTGTTGGTCCCCCTAAATCTGCCCTTGACGCGGCACTCGCCCGGTCCACAGCACGCAAGCGGGAACGGCAACAGGCGAATGCAGAACCAAAACAACGGGCCGATCCCCGCAAAGCCGCCGTCGAA‑GCCGCTCTTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAg < 2:848329/285‑1 (MQ=14)
aaCCGTTGCTGATCCTCGGAAGACTGCAGTCGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAACCAGAACAACATGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCATAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGTCGA‑GCCa < 1:577384/286‑1 (MQ=255)
gCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCGGCTATTGCCCGTGCCAAAGCGCGCAAGCGGG‑AACAGCAACAGGCTCATGCGGAACCAGAAGAACAGGTCGCTCCGCGCAAAGCCGCAGTCGAAGCGGCTATTGCCCGTGCCAAAGCACGCAACATAGCC‑CACCAACAGGCTAATGcggcaccactagcacagg > 2:164595/1‑272 (MQ=17)
gCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAgg > 1:364421/1‑289 (MQ=255)
aTCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑ACCAGAA‑CAACAGGt > 1:848329/1‑286 (MQ=255)
tCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGc > 2:130920/1‑267 (MQ=255)
gccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGc < 1:130920/266‑1 (MQ=255)
ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCaa < 1:960689/255‑1 (MQ=255)
cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTGGATCCGCGAAAAGCCGCCGTCGACGCCGATATTGGGCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCAAATGCGGA‑GCGAGCA‑CAAAAGGTCTATctg > 1:125187/1‑286 (MQ=17)
cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑AAACAACAGGCTAACGCCGA‑GCCAGAA‑CAACAGGTCGCTCcg > 1:881372/1‑288 (MQ=255)
aaCTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGTGCCAAAGCAAGCAAGCTGGAA‑CAGCAAAAGGCTAATGCCGA‑GCCAGAA‑AAACAGGTCGATcaccccaaa > 1:1097429/1‑281 (MQ=255)
ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGC‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAgccg > 1:987805/1‑288 (MQ=255)
cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAC‑GCCGCTATTGCCCGCGCCCAAGCGCGCAA‑CTGGCAACTGTAACCGGCTAATGCGGCAGCAGAAGAACAGGGTGAAGCGCGCAAAGCGGCCGTTGACGCCGCTATTGCCCGAGCCAAAGCAC‑CAAACCGGAACCCGCACCAAGCTAATGCTGC‑GCCAGAAGAAACAGG‑CGATCcgctgcaaggcga > 2:185736/1‑278 (MQ=2)
tgagcaaaacggcgcGAACGCCCGCAATGTTGAACAGAACCAGGATAAGGATGACCCAGACGCACAGGACTACCCGCGCAAGGCCGCCGTCGAA‑GCCGCTGTTGCCCGGGCCAAAGTACGCAAGTGGG‑AACAGCAACAGGCTACTGCCGAGCCATAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAA‑CAGCAACCGGCTAATGCGGA‑GCCAGAA‑GAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc < 2:423954/277‑1 (MQ=14)
tATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGG‑AACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGAACCGCGCAAAGCCGCCGTCGACACCGCTATTGCCCGAGCCCAAGCGCGCAAACCGGAA‑CAGCAAAACGCTAATGCGTAGGCCAGAA‑CACACGGTC‑AGCAGCGAAAAGCCGCCGTAGCAGCCga > 2:571689/1‑287 (MQ=14)
cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACTCGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CCACAGGTCGAACCACGAAAAGCCGCCGTCGACGCGGCCATTGCCCGa > 1:79024/1‑289 (MQ=255)
gcCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACCGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCACGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CACCAGCTCGATCCGCGCAAACCCGCCGCCGAAGCCCCAATCGCCCGa > 1:291831/1‑288 (MQ=14)
cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTTGAAGCCGCTATTGCCCGTGCCAAAGCAAGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAAAAGGTCGATACGCGCAACGCCGCCGTCGAAGCCGATATTGCCCGAGCCAAAGCGAGCAAACCGGAACacc > 1:693303/1‑287 (MQ=17)
caaGGCAAATGCGGACCAAGACAAACCGGTCGATCCGCTGAAAGCCGCCGCCGAA‑GCCGCTATTGCCCTGGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCaa < 1:602318/287‑1 (MQ=17)
aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAAAAGGCTAATGCCGA‑GCCCGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAACCGCTATTGCCCGAGACAAAGACCGCAAACGGGAACAGCAACCGGCTAATGCCGa > 1:795829/1‑289 (MQ=255)
cttaacagacagtgtggATCCG‑GCAAGTCCGCCGTCCAATGCCGCTCTTGCCCGTGCAACAACACGACAGGTGG‑AACAGCAACAGGCTAATGCAGGAACAGAAGAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGTTAGTGCCCGGGCCAAAGCACGCAAGCTGGAA‑CAGCAGCAGGCTAATGCCGG‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa < 2:877889/272‑1 (MQ=14)
aCCAGAAAAACAGGCCGAGCCGCGAAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa < 1:771253/288‑1 (MQ=255)
acaacaGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCag < 1:541246/287‑1 (MQ=255)
aacaGTTCGATCCGCGGAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga < 1:266838/289‑1 (MQ=255)
ggTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑GAACAGGTCGAACCGCGCAAAGCCGCCGTTGCAGCCGCTATTGCCCGGGCCAAGCCCCGTCAACCGGCACAGCAGCCGGCtgcacacgcagccgaccagacg > 2:451625/1‑268 (MQ=14)
gTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc < 1:824035/125‑1 (MQ=40)
gccccccAAAGCGGCCGTCGAC‑GCCGCGATGGCCCGGACCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATTCCGAACCGGAAGACCAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATGGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACCGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt < 1:147502/283‑1 (MQ=17)
gcAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑CACAGCAACAGGCTAATGAGGTACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGcc > 2:824035/1‑125 (MQ=255)
cAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCCGAAGAACAGGTTGATccccca > 1:821817/1‑285 (MQ=255)
a‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGac > 1:488651/1‑288 (MQ=255)
tggcgcaagtgagaaggacgcagtagccAAGCCGG‑AAAAACCGCAGGTGAATGAGGAACCAGAAGACGAGGACGATAGACGCAAGTCCGCAGTCGAGGCCGCTATTGCCGGGGCCAAAGGACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGG‑GCCAGAA‑TAACATGTCTAACCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAACGGGAACAGCAACCGGATAATGCGGAGCCAGAAGAACAGGGTGATCCGGGCAAAGCTGCCGTCGa < 2:789330/261‑1 (MQ=9)
cctccaTTGCCGCTGCCAAAGCGCGGAAGCTGG‑AACATCATCAGGCCACTGCGGACACAGAAGATCAGGACGATCCACGGAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGc < 1:413705/284‑1 (MQ=14)
cGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAATCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAg < 1:1088413/287‑1 (MQ=255)
cTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAgg < 1:740635/258‑1 (MQ=255)
ccGCGCCAAAGCGCGCAAGCTGG‑AACAGCAACGGCCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa < 1:584852/289‑1 (MQ=255)
cagagacAAAGCGCCCAGACGGG‑AACGGGAACAGGTAAAGGCGGTACAAGACGAGCAGGACGATCCGGGCAAAGCAGCCGTCGAAGCCGCGATGGCCCGTGCCAAAGCGGGCAAGCGGGAA‑CGGCAACAGGCTAATGCGGT‑ACCAGAG‑GAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCa < 2:881372/283‑1 (MQ=11)
gtgcaaaggcaggtaaGATGG‑AACAGAAACAGGCTAAGGCGCAGCCAGAACATGCGTGCGAACCGCGAAAAGCGGCCAAGGGAGCGGCTATTGCCCGTGCCAAAGCGCGCAAACGGGAA‑CAGCAACCGGCTAATGCGGA‑GCCAGAA‑GAACAGGTTGATCCGCGAAAAGCGGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAcg < 2:481075/275‑1 (MQ=11)
tGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg < 1:588569/83‑1 (MQ=35)
tGCCAAAGCACGCAAGCTGG‑AACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAA‑CAGCAACCGGCTAATGCGGA‑GCCAGAA‑GAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCCAACGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCGATGGCAcgc > 1:481075/1‑289 (MQ=11)
cgcgcAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGCACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCCAAg > 1:299753/1‑288 (MQ=255)
cgcAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGCCGAAGCGGCTCTTGCAcctgtctcttaga > 1:423954/1‑277 (MQ=255)
cAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCACTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg < 1:195662/288‑1 (MQ=255)
gaagcgagaaaaacAACAGGCTAATGCGGCACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTACCCGTGCAAAAGCACGCAAGCTGGAA‑CAGCAACAGGGTACTGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg < 1:1061177/275‑1 (MQ=17)
aaaaggg‑AACAGCAACCGGCGAATGCGGAACCCACAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGGTATGGCCCGTGCCAAAGCACGCCAGCGGGAA‑CAGCAACAGGCTAATTCCGA‑GCAAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACg < 2:914339/282‑1 (MQ=17)
aaCAGCAACAGGCTACTACGGAGCCAGAAAACCAGGATGACCCGCGCAAAGCCGCCGTCGAAGCCGCTCTGGCCCGGGCCAAAGCACGAAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTgg < 1:887850/288‑1 (MQ=17)
cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCcg > 1:651999/1‑135 (MQ=255)
cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCcg < 2:651999/135‑1 (MQ=255)
aaCAGGCAAATGAGGAACCAGAAGCACTGGTTGATCCGCGTAAAGCGGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GGCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCa < 1:109888/289‑1 (MQ=255)
aCAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCaa < 2:476885/97‑1 (MQ=37)
aCAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCACGCAAACGGGAACAGCAGCAGGCTCATGCGGAGCCCGAAACACAAGTTGATCTGCGCAACGCTGCCCTCGAAGCGGCTACTGCACACGCCAACGAACGCCAGccataaaagca > 2:840687/1‑278 (MQ=14)
aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGaa > 1:914339/1‑281 (MQ=255)
aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACa > 1:768010/1‑211 (MQ=255)
aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCACCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCACGCGCCAACGCACGCAAGCTGGAACAGCAACAGGCTaa > 1:1022086/1‑289 (MQ=255)
tgAACCAGAAGACAAGGCCGACCCTGGCGAAGCCGCCGGCAAAGCCGCTATTGCCCGTGCAAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCAA‑GCCAGAA‑CAACAGTTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCg < 1:672220/288‑1 (MQ=17)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCCAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGCACAGCAACAGGCTATTGCCGAGCCAGAAGAAACGGTTGATCCGCCCAAAGCCGCCCTCTACGCGGCCATTGACCCAGCCGAAGCACGCAAACTGGCACAGCaccgcaccaatcggc > 2:351961/1‑274 (MQ=14)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGACAGAAGAACAGGTTGATCCGCGCAACGAGCCCGTCAAAGCGGCCATCGCACGCGACCAAGCCCGCAAGACGGAACAGCGACAgcgcaatgaggt > 2:565909/1‑278 (MQ=17)
aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAACCCCGCAAAAGGAAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGCATGATCCGCGCCAAGCGGCCGCTCACGCAGATCTTACACGCCCCAAAGCAACCAAGCTGGAACAGCGACAGGCTaacgggtg > 2:434251/1‑283 (MQ=17)
aCCAGAAGATCAGGTTCATCCGGGCAAAGCCGCCGTTGAAGCCGCGATAGCCCGGGCCAAAGCACCCAAGCTGGAA‑CAGCAACAGGCTAATGCCGG‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGt < 1:955600/288‑1 (MQ=17)
caagaaCAGGTCGATCCACGGAAAGCCGCCGTCGAAGCCGCTAATGCCCGTGCAAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCag < 1:711130/288‑1 (MQ=255)
agaagaGGTCGATCGGGGAAAAGCCGGCGTCGAAGGCGCTATGTCCCGTGACAAAGCAAGCAAACGGGAA‑CAGCAACAGGCTAATGCCGA‑GCAAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGACAAAGCACGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCAAAAGCACGCAAGCTGGAACAACAACAGGCTAATGCGGTACCag < 1:208674/287‑1 (MQ=17)
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GCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAA‑GCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGG‑AACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAA‑CAGCAACAGGCTAATGCCGA‑GCCAGAA‑CAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAG > NC_000913/1708471‑1709043
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A