Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I3 R1 283 58.3 1819865 98.8% 1798026 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,260,849 G→A intergenic (‑46/+79) dauA ← / ← prs C4‑dicarboxylic acid transporter/phosphoribosylpyrophosphate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,260,8490GA98.6% 226.1 / NA 69intergenic (‑46/+79)dauA/prsC4‑dicarboxylic acid transporter/phosphoribosylpyrophosphate synthase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (31/37);  total (31/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATCAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAGGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCGGCCAGCAT  >  NC_000913/1260703‑1260993
                                                                                                                                                  |                                                                                                                                                
aTCAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGa                                                                                                                                              <  2:906761/151‑1 (MQ=255)
aTCAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGa                                                                                                                                              <  2:300233/151‑1 (MQ=255)
  cAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGaa                                                                                                                                             <  2:95314/150‑1 (MQ=255)
  cAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGa                                                                                                                                              >  2:280002/1‑149 (MQ=255)
     gTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAagg                                                                                                                                           >  2:68415/1‑149 (MQ=255)
       cACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAaggagg                                                                                                                                        <  2:593810/150‑1 (MQ=255)
        aCGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCa                                                                                                                                      <  1:843968/151‑1 (MQ=255)
              aaaCCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTc                                                                                                                                <  2:112596/151‑1 (MQ=255)
                aCCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCAt                                                                                                                              >  2:865471/1‑151 (MQ=255)
                 ccGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATa                                                                                                                             <  1:732462/151‑1 (MQ=255)
                  cGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATAc                                                                                                                            >  1:741549/1‑151 (MQ=255)
                   gTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACa                                                                                                                           <  1:840428/151‑1 (MQ=255)
                     gCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACaa                                                                                                                          <  1:274032/150‑1 (MQ=255)
                       ggCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATg                                                                                                                       >  2:601594/1‑151 (MQ=255)
                         cAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGa                                                                                                                     <  1:554721/151‑1 (MQ=255)
                          aGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGat                                                                                                                    >  1:65295/1‑151 (MQ=255)
                             atatTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGatat                                                                                                                  <  1:799163/150‑1 (MQ=255)
                             atatTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATAtt                                                                                                                 >  1:13516/1‑151 (MQ=255)
                               atTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCa                                                                                                                               >  2:1478/1‑135 (MQ=255)
                               atTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCa                                                                                                                               <  1:1478/135‑1 (MQ=255)
                               atTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTAc                                                                                                               <  2:744374/151‑1 (MQ=255)
                                 ttttCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACa                                                                                                              <  1:770730/150‑1 (MQ=255)
                                       ttcCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACaaa                                                                                                        >  1:37389/1‑150 (MQ=255)
                                          cAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACaaaaaa                                                                                                     >  2:551016/1‑150 (MQ=255)
                                           aGCAAGCGTCGATCACAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAAc                                                                                                   >  1:234118/1‑151 (MQ=255)
                                            gCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAAcc                                                                                                  <  1:687385/151‑1 (MQ=255)
                                            gCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAAcc                                                                                                  <  2:794995/151‑1 (MQ=255)
                                             cAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAAccc                                                                                                 <  2:294423/151‑1 (MQ=255)
                                                   tCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCcgccgc                                                                                            >  2:626639/1‑150 (MQ=255)
                                                    cGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCcgccgc                                                                                            >  2:465496/1‑149 (MQ=255)
                                                         agagCGCGAAAAGGCATCACATGGGAGAAAAATATTTTGTTCAAAAAAATGTTACATCCGTGAGCGAATCATCTGTCAACAAAAGGGCAAGTGAAGGGGGCATAGGTCATACAAATGGATATTACAGAAAAAAAAACCCGCCGCAGCggg                                                                                      <  2:61061/150‑1 (MQ=255)
                                                             cgcgGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCttt                                                                                 >  2:435447/1‑151 (MQ=255)
                                                                   aaGCCATCACATTGGAGAAAAATATTTTGTTAACAATAATGTTTCACCCGTGAGCGAATCATCTGTCAACTAAATGGAAAGTGAGGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCg                                                                           <  2:63749/151‑1 (MQ=255)
                                                                        aTCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTc                                                                      >  2:582581/1‑151 (MQ=255)
                                                                         tCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCg                                                                     >  1:735615/1‑151 (MQ=255)
                                                                            caTGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGAtt                                                                  >  2:356584/1‑151 (MQ=255)
                                                                             aTGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGAtt                                                                  >  1:833400/1‑150 (MQ=255)
                                                                                 gAGGAAAATATTTTGTTCAAAAAAATGTTTCATCCGTGAGCGCATCATCTGTCAACAAAAGGGCAAGTGAAGGAGGCATGGGTCATACAAAGGGATATTAAAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTa                                                                 <  2:328188/147‑1 (MQ=255)
                                                                                  agaaaaaTATTTTGTTCACAATAATTTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGACAAGAGAAGGGGGCATAGGTCATACAAAGGGATATTAAAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAgtgt                                                             <  2:167946/147‑1 (MQ=255)
                                                                                     aaaaTATTTTGTTCAAAAAATTGTTTCATCCGTGGGCGGTGCATGTGCAAACAAAATGGCAAGGGAAGGGGGATTAGGCACGACAAGTGGATATTAAAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTc                                                           <  2:248013/149‑1 (MQ=255)
                                                                                      aaaTATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGa                                                         >  1:221343/1‑150 (MQ=255)
                                                                                        atatTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAAc                                                       >  2:6215/1‑150 (MQ=255)
                                                                                           ttttttTCAAAAAAATGTTTCTTCCGTGGGCGGATCATCTGCAAACAAAATGGCAAGTGAAGGAGTCAAAGGTCTTAAAAATGTATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACAt                                                     <  2:908094/149‑1 (MQ=255)
                                                                                                ttCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCag                                                >  2:232797/1‑149 (MQ=255)
                                                                                                ttCAAAATAATTTTTCATCCGTGAGCGCATCATCTGTAAAATAAAGGGCAAGTGAAGGAGGCATGGGTCATAAAAATGGATATTACAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCaga                                               <  2:735581/150‑1 (MQ=255)
                                                                                                  cacaATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCag                                                >  2:430965/1‑147 (MQ=255)
                                                                                                   acaATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAAGGGCAAGTGAAGGAGGCATAGGTCATAAAAAGGGATATTACAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATc                                           <  1:182817/151‑1 (MQ=255)
                                                                                                     aataatGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGAC‑AAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGAt                                        >  1:724319/1‑151 (MQ=255)
                                                                                                       taatGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGGCAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGAtt                                       >  2:543115/1‑151 (MQ=255)
                                                                                                       taatGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGAtt                                       >  1:438955/1‑151 (MQ=255)
                                                                                                            tttCATCCGTGGGCGCATCATCTGTCAAATAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAAAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGAttcttc                                   <  1:468308/150‑1 (MQ=255)
                                                                                                            tttCATCCGTGAGCGCATCATCTGTAAACTAAATGGCAAGTGAAGGAGGCATAGCTCATAAAAATGGATATTACAGACAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGAttctt                                    <  1:520491/149‑1 (MQ=255)
                                                                                                                 cccGTGAGCGCTTCATCTGTCAACTAAAGGGAAAGTGAAGGAGGCATAGGTCAAACAAATGGATATTCCAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCt                             <  2:104313/150‑1 (MQ=255)
                                                                                                                  ccGTGAGCGAATCATCTGTCAACAAAATGGCAAGGGAAGGAGGCATAGGTCATAAAAATGGATATTACAAACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCt                             <  2:497160/150‑1 (MQ=255)
                                                                                                                    gTGAGCGCATCATCTGTCAACAAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGa                           <  2:41829/150‑1 (MQ=255)
                                                                                                                    gTGAGCGCATCATCTGTAAACTAAATGGCAAGGGAAGGAGGAATAGGTCATACAAATGGATATTACAGACAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGAt                          <  1:651968/151‑1 (MQ=255)
                                                                                                                     tGAGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGAt                          >  1:109767/1‑150 (MQ=255)
                                                                                                                       aGCGCATCATCTGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATacg                       >  1:669837/1‑151 (MQ=255)
                                                                                                                               atcTGTCAACAAAATGGCAAGTGAAGGAGGCATAGGTCATACAAAGGAATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGaa                  <  1:68437/148‑1 (MQ=255)
                                                                                                                                tcTGTCAACAAAAGGGAAAGTGAAGGGGGAATAGGTCATAAAAAGGGATATTACAGAAAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATc                <  2:169164/149‑1 (MQ=255)
                                                                                                                                  tGTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCtt            >  2:559746/1‑151 (MQ=255)
                                                                                                                                   gTCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGAAAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCg               <  1:372000/147‑1 (MQ=255)
                                                                                                                                   gTCAACAAAATGGCAAGTGAAGGAGGAATAGGTAATAAAAATGGATATTACAGAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCt             <  1:490537/149‑1 (MQ=255)
                                                                                                                                    tCAACTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCg          >  2:541719/1‑151 (MQ=255)
                                                                                                                                      aaCTAAATGGCAGGTGAAGGAGGCATAGGTCATACAAATGAATATTCCAAAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCg               <  1:180484/144‑1 (MQ=255)
                                                                                                                                      aaCTAAATGGAAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAACCCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCg          <  1:6226/149‑1 (MQ=255)
                                                                                                                                       aCTAAATGGAAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAAAAAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCGGcc       <  1:356610/151‑1 (MQ=255)
                                                                                                                                        cTAAATGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCGGcc       >  1:823858/1‑150 (MQ=255)
                                                                                                                                             tGGCAAGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCGGCCAGCAt  >  2:737809/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
ATCAGGTCACGGGTAAACCGTGCGGCAGTATATTTTTCTTTCCAGCAAGCGTCGATCAGAGCGCGGAAAGGCATCACATGTGAGGAAAATATTTTGTTCACAATAATGTTTCATCCGTGAGCGCATCATCTGTCAACTAAATGGCAGGTGAAGGAGGCATAGGTCATACAAATGGATATTACAGACAAAAAAACCCGCCGCAGCGGGTCTTTGAGCCGGGTTCGATTAGTGTTCGAACATGGCAGAGATCGATTCTTCGTTGCTGATACGACGAATCGCTTCGGCCAGCAT  >  NC_000913/1260703‑1260993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A