Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,319,794 |
T→C |
R386R (CGT→CGC) |
argG → |
argininosuccinate synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,319,794 | 0 | T | C | 99.3%
| 502.7
/ NA
| 135 | R386R (CGT→CGC) | argG | argininosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (66/68); total (67/68) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 136 total aligned reads displayed.
TTGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGTCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGC > NC_000913/3319646‑3319941
|
ttGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCt > 1:1061510/1‑151 (MQ=255)
ttGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCt > 3:48171/1‑151 (MQ=255)
tGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTg > 1:1774468/1‑151 (MQ=255)
gACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTg > 1:7726/1‑150 (MQ=255)
gACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTg < 4:790448/150‑1 (MQ=255)
ccAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATg < 3:34938/151‑1 (MQ=255)
cAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATgg < 2:145862/151‑1 (MQ=255)
cAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATgg < 1:547923/151‑1 (MQ=255)
aGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGa < 4:872060/151‑1 (MQ=255)
cgcTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGaaa > 4:78605/1‑150 (MQ=255)
cgcTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGaaa < 3:494545/150‑1 (MQ=255)
ctgcGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACt > 1:578137/1‑151 (MQ=255)
ctgcGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACt > 1:1229156/1‑151 (MQ=255)
gcGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTc < 1:345670/150‑1 (MQ=255)
cGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCgg > 4:1294946/1‑151 (MQ=255)
gTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGgt > 2:176965/1‑151 (MQ=255)
tGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGgtg > 1:721016/1‑151 (MQ=255)
gACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGgtg < 3:415212/150‑1 (MQ=255)
tctctGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTtct > 1:715997/1‑151 (MQ=255)
gCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTtct < 2:208380/146‑1 (MQ=255)
gCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGcc > 2:6130/1‑150 (MQ=255)
aaCGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGcc > 1:1275894/1‑148 (MQ=255)
aaCGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGcc > 4:413945/1‑148 (MQ=255)
aCGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTAACGATGGAAAAAGGCGCCTCGGTGTTCTCGCCAgat < 1:88719/151‑1 (MQ=255)
gCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAgatg > 2:115076/1‑150 (MQ=255)
cTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAgatgat > 4:1174702/1‑151 (MQ=255)
ggTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCg > 3:30912/1‑150 (MQ=255)
ggTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGt > 1:806938/1‑151 (MQ=255)
ggTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGt < 1:1028911/151‑1 (MQ=255)
gTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTa < 3:144862/151‑1 (MQ=255)
gTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTa < 4:961235/151‑1 (MQ=255)
ttGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTa > 3:121201/1‑150 (MQ=255)
gccagccaGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTAtt < 1:1402539/150‑1 (MQ=255)
gccagccaGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTg < 2:491401/151‑1 (MQ=255)
gccagccaGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTg < 1:82792/151‑1 (MQ=255)
ccagccagATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTgg < 3:169448/151‑1 (MQ=255)
cagccagATCTCTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGt < 4:1572139/151‑1 (MQ=255)
cagATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAAt < 1:9620/151‑1 (MQ=255)
gATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTg < 2:302042/151‑1 (MQ=255)
aTCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTg > 4:295890/1‑150 (MQ=255)
aTCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGa < 1:503881/151‑1 (MQ=255)
aTCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGa < 4:1151457/151‑1 (MQ=255)
cTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCAt > 1:1844391/1‑151 (MQ=255)
ggTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGc < 1:956898/151‑1 (MQ=255)
gTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCg < 4:973166/151‑1 (MQ=255)
aCCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTgg > 1:1749778/1‑151 (MQ=255)
cccTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTgg > 1:1747701/1‑150 (MQ=255)
ccTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGat < 4:1539245/151‑1 (MQ=255)
ccTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGat < 4:1601345/151‑1 (MQ=255)
ccTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGat < 1:169478/151‑1 (MQ=255)
cTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGat > 4:905949/1‑150 (MQ=255)
tGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGatat > 1:1074296/1‑151 (MQ=255)
tGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGatat > 4:731532/1‑151 (MQ=255)
ggAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGatat < 4:293155/150‑1 (MQ=255)
aGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCAc < 2:531389/151‑1 (MQ=255)
aGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCAc < 1:1782932/151‑1 (MQ=255)
cTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTg > 1:504606/1‑151 (MQ=255)
tGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTg > 4:458246/1‑150 (MQ=255)
gcgcCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGCTGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTg < 2:461140/149‑1 (MQ=255)
gcCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATAc > 1:1205358/1‑151 (MQ=255)
gcCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATAc > 1:41583/1‑151 (MQ=255)
cGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATAccc > 4:1082569/1‑151 (MQ=255)
cGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCACGCGTAACCTGGATATCACTGATAccc > 3:538189/1‑151 (MQ=255)
aaCGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCcgcg > 1:200183/1‑148 (MQ=255)
aCGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGaa < 3:374624/151‑1 (MQ=255)
cGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGaa > 4:29334/1‑150 (MQ=255)
attCAATCCTGAATACCGTCTCAGGGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCACGCGTAACCTGGATATCACTGATACCCGCGAGAAACttt < 3:7385/150‑1 (MQ=255)
ttCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACtttt < 4:1878891/150‑1 (MQ=255)
cAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTTGATATCACTGATACCCGCGAGAAACTTTTCg < 2:63101/150‑1 (MQ=255)
cAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCgg > 1:1864078/1‑151 (MQ=255)
tCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGtt > 1:540763/1‑150 (MQ=255)
ccTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTAt < 4:346446/151‑1 (MQ=255)
ccTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTAt > 2:49813/1‑151 (MQ=255)
ccTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTAt < 4:1874061/151‑1 (MQ=255)
gAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATg < 1:1659625/149‑1 (MQ=255)
tACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCCGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCaa > 1:1554940/1‑150 (MQ=255)
aCCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCaaaa < 4:757706/151‑1 (MQ=255)
ccGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAAc < 4:716311/151‑1 (MQ=255)
ccGTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAAc < 4:795522/151‑1 (MQ=255)
gTCTCAGAGAACCTGGCCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAAc < 2:219010/149‑1 (MQ=255)
gTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTg > 1:1468725/1‑151 (MQ=255)
gTCTCAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTg < 1:895716/151‑1 (MQ=255)
ctcAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGCATAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGc > 3:414904/1‑151 (MQ=255)
tcAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGcc > 1:1791608/1‑151 (MQ=255)
gcAGAGAACATGACCGAGGAGGGGGAGAGTGGGAGGATGAAAAGAGGCGACTCGGGGTGCCCGCCAGATTATAAAAAAGGTCAATAAACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAAATTTTCGGTTATGCAAAAACTGGcc > 1:1866826/2‑151 (MQ=255)
cAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGcc < 1:560401/150‑1 (MQ=255)
cAGAGAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGc < 4:900590/149‑1 (MQ=255)
agagAACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTg > 1:806723/1‑151 (MQ=255)
gagaACCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCGAAAACTgg < 3:463955/146‑1 (MQ=255)
aaCCTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCttt > 1:954010/1‑151 (MQ=255)
ccTGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTtcc < 4:537424/151‑1 (MQ=255)
tGACCTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTtcctc > 1:1443622/1‑151 (MQ=255)
cTACAAGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCctct > 2:324901/1‑151 (MQ=255)
aaGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCg > 2:145011/1‑151 (MQ=255)
aGCCAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGc < 1:285459/151‑1 (MQ=255)
ccAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCtt > 4:581327/1‑151 (MQ=255)
cAGAGCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTc < 4:1845110/151‑1 (MQ=255)
agagCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCa < 4:1469314/151‑1 (MQ=255)
agagCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCa < 4:1205872/151‑1 (MQ=255)
agCGCCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAgg < 1:270475/151‑1 (MQ=255)
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TTGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGTCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGC > NC_000913/3319646‑3319941
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
