Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,856,193 G→A L39F (CTT→TTT)  yidH ← DUF202 family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,856,1930GA100.0% 266.7 / NA 71L39F (CTT→TTT) yidHDUF202 family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (37/34);  total (37/34)

GCAGGTCCTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTA  >  NC_000913/3856046‑3856339
                                                                                                                                                   |                                                                                                                                                  
gCAGGTCCTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAAccc                                                                                                                                                 <  1:633092/151‑1 (MQ=255)
     tCCTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAaacccaaccc                                                                                                                                            >  2:45734/1‑151 (MQ=255)
     tCCTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAaacccaaccc                                                                                                                                            >  2:830310/1‑151 (MQ=255)
      ccTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAAcccc                                                                                                                                           >  1:332430/1‑151 (MQ=255)
      ccTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACACAAcccc                                                                                                                                           >  2:338798/1‑151 (MQ=255)
      ccTCTTTCAGACGCACCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAAcct                                                                                                                                            <  2:1040123/150‑2 (MQ=255)
         ctTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCccgc                                                                                                                                        >  2:349378/1‑151 (MQ=255)
         ctTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCccgc                                                                                                                                        >  2:184051/1‑151 (MQ=255)
            tCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCcgccgc                                                                                                                                     >  2:689021/1‑151 (MQ=255)
                 cGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGaa                                                                                                                                <  2:219721/151‑1 (MQ=255)
                 cGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGa                                                                                                                                 >  1:518016/1‑150 (MQ=255)
                     tCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATcc                                                                                                                            >  1:284915/1‑151 (MQ=255)
                          ttttCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGt                                                                                                                        <  1:1053683/150‑1 (MQ=255)
                             tCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCa                                                                                                                     <  1:348103/150‑1 (MQ=255)
                              cATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAg                                                                                                                    <  2:928554/150‑1 (MQ=255)
                                 tGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACg                                                                                                                >  2:341231/1‑151 (MQ=255)
                                  gCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACgg                                                                                                               <  2:475023/151‑1 (MQ=255)
                                   cGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACgg                                                                                                               >  1:678696/1‑150 (MQ=255)
                                   cGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGa                                                                                                              <  2:484984/151‑1 (MQ=255)
                                    gTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGAt                                                                                                             >  2:910336/1‑151 (MQ=255)
                                      aaCCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATcc                                                                                                           >  1:816796/1‑151 (MQ=255)
                                         cAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCa                                                                                                          <  2:529471/149‑1 (MQ=255)
                                               aaGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGaa                                                                                                  <  1:730389/151‑1 (MQ=255)
                                               aaGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGa                                                                                                   >  2:194385/1‑150 (MQ=255)
                                               aaGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGa                                                                                                   >  1:341196/1‑150 (MQ=255)
                                                aGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGaaa                                                                                                 <  1:329391/151‑1 (MQ=255)
                                                    gCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATATGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGt                                                                                              >  2:79565/1‑150 (MQ=255)
                                                     ccATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTAc                                                                                            >  1:334135/1‑151 (MQ=255)
                                                        tACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGc                                                                                          >  2:143965/1‑150 (MQ=255)
                                                         aCATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGc                                                                                          <  2:568905/149‑1 (MQ=255)
                                                         aCATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTc                                                                                        >  1:466960/1‑151 (MQ=255)
                                                          cATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCa                                                                                       <  1:194393/151‑1 (MQ=255)
                                                                tAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTa                                                                                    <  1:5545/148‑1 (MQ=255)
                                                                  aCCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAg                                                                               <  2:128078/151‑1 (MQ=255)
                                                                     cgccgGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCg                                                                             >  2:525521/1‑150 (MQ=255)
                                                                        cgGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCgaga                                                                          >  2:206813/1‑150 (MQ=255)
                                                                          gAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGc                                                                       >  1:964990/1‑151 (MQ=255)
                                                                          gAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGc                                                                       >  2:622146/1‑151 (MQ=255)
                                                                           aaaaCAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCg                                                                      >  1:921198/1‑151 (MQ=255)
                                                                               cAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTa                                                                   >  1:683851/1‑150 (MQ=255)
                                                                                 gACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAAt                                                                 <  2:588815/150‑1 (MQ=255)
                                                                                        caacaacGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCACCCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCt                                                         <  1:124416/151‑1 (MQ=255)
                                                                                         aacaacGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCtt                                                        <  2:367424/151‑1 (MQ=255)
                                                                                           caacGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTtct                                                      <  1:921967/151‑1 (MQ=255)
                                                                                           caacGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTtct                                                      >  2:781420/1‑151 (MQ=255)
                                                                                             acGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTcc                                                    >  2:25921/1‑151 (MQ=255)
                                                                                             acGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTcc                                                    <  2:907223/151‑1 (MQ=255)
                                                                                               gCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGa                                                  <  1:427719/151‑1 (MQ=255)
                                                                                               gCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGa                                                  <  1:842685/151‑1 (MQ=255)
                                                                                                   gcagTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGc                                               <  2:999165/150‑1 (MQ=255)
                                                                                                   gcagTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCg                                              <  2:770884/151‑1 (MQ=255)
                                                                                                   gcagTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCg                                              <  1:801636/151‑1 (MQ=255)
                                                                                                    cagTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCgg                                             <  2:770706/151‑1 (MQ=255)
                                                                                                        tCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGaa                                          <  1:373660/150‑1 (MQ=255)
                                                                                                        tCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGaa                                          >  2:100008/1‑150 (MQ=255)
                                                                                                         cgcgAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGaaa                                         <  2:652673/150‑1 (MQ=255)
                                                                                                         cgcgAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAAt                                        <  1:59332/151‑1 (MQ=255)
                                                                                                           cgAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAAttt                                      >  1:508673/1‑151 (MQ=255)
                                                                                                             aaTGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTc                                    <  2:850867/151‑1 (MQ=255)
                                                                                                                 aCGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCAtt                                 >  1:15567/1‑150 (MQ=255)
                                                                                                                 aCGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCAtt                                 >  2:170644/1‑150 (MQ=255)
                                                                                                                       gTGGCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTc                          >  2:574980/1‑151 (MQ=255)
                                                                                                                         ggCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTcc                         <  2:470049/150‑1 (MQ=255)
                                                                                                                         ggCGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCt                        >  1:95527/1‑151 (MQ=255)
                                                                                                                           cGAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCttt                      >  1:455644/1‑151 (MQ=255)
                                                                                                                            gAAATCTGGCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTg                     <  1:258247/151‑1 (MQ=255)
                                                                                                                                   ggCGCAAGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCaa                  <  1:574995/147‑1 (MQ=255)
                                                                                                                                        aaGTTGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTTATTGTTGCCCCTTTGCAAttt               >  2:639300/1‑145 (MQ=255)
                                                                                                                                           ttGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGc      >  2:727443/1‑151 (MQ=255)
                                                                                                                                           ttGATCAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGc      >  1:637228/1‑151 (MQ=255)
                                                                                                                                               tCAAACCCAACACCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCCCATTATCCAGCGAGAAGCGGTAATCAGGCGCATCTCCGAGGCGGGAAAATTTCATTGGTGATCCTTTGTAATTTTACTAAAActct   >  1:517952/1‑150 (MQ=255)
                                                                                                                                                cAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGctct   >  1:523234/1‑149 (MQ=255)
                                                                                                                                                cAAACCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTa  <  2:753139/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCAGGTCCTCTTTCAGACGCATCGCTTTTTCATTGCGTAACCAGCGCAAGTAGCCATACATCGCTAACCCGCCGGAAAACAGACACAACAACAACGCCAGCAGTTCGCGAATGACGGGCGTGGCGAAATCTGGCGCAAGTTGATCAAGCCCAACCCCCGCCGCCAGAAATCCTAGTGCAGTACGGATCCACGCCAGAAAAGTACGCTCATTAGCCAGCGAGAAGCGGTAATCAGGCGCTTCTCCGAGGCGGGAAATTTTCATTGTTGCTCCTTTGCAATTTCACTAACGCTCTA  >  NC_000913/3856046‑3856339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A