Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,929,378 A→G C76R (TGC→CGC)  viaA ← stimulator of RavA ATPase activity; von Willebrand factor domain protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,929,3780AG100.0% 252.8 / NA 68C76R (TGC→CGC) viaAstimulator of RavA ATPase activity; von Willebrand factor domain protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/41);  total (27/41)

GTAACGCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG  >  NC_000913/3929231‑3929518
                                                                                                                                                   |                                                                                                                                            
gtAACGCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCAt                                                                                                                                           <  2:719229/151‑1 (MQ=255)
 tAACGCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATc                                                                                                                                          >  2:227605/1‑151 (MQ=255)
  aaCGCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCa                                                                                                                                         <  1:216578/151‑1 (MQ=255)
     gCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACct                                                                                                                                      >  1:337784/1‑151 (MQ=255)
       tGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACctct                                                                                                                                    >  1:770109/1‑151 (MQ=255)
       tGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGCCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACctct                                                                                                                                    >  1:649238/1‑151 (MQ=255)
        gAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCtt                                                                                                                                   <  2:339723/151‑1 (MQ=255)
         aaGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTc                                                                                                                                  <  1:608108/151‑1 (MQ=255)
          aGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCg                                                                                                                                 <  2:105681/151‑1 (MQ=255)
          aGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCg                                                                                                                                 >  1:387957/1‑151 (MQ=255)
           gTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCgg                                                                                                                                <  1:821350/151‑1 (MQ=255)
            tGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGTTTCTGTGGTAGCTGCACAATAAACTGTGCCATGGAGACGATCCGGCTTTGCTGATCGCGCATCACCTCttagt                                                                                                                                <  2:146696/150‑4 (MQ=255)
                 gTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGtt                                                                                                                          <  1:593484/151‑1 (MQ=255)
                   gCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTcc                                                                                                                        <  2:339514/151‑1 (MQ=255)
                     ttttAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGATAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAACGCCTCACCTCTTCGGTGAGTTCcgg                                                                                                                      >  1:303568/3‑151 (MQ=255)
                        tAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCcggcgg                                                                                                                   >  2:92767/1‑151 (MQ=255)
                        tAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCcggcgg                                                                                                                   >  1:460225/1‑151 (MQ=255)
                         aGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCcggcgg                                                                                                                   <  1:908840/150‑1 (MQ=255)
                           cATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGAc                                                                                                                >  2:565220/1‑151 (MQ=255)
                              caaccaacTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTc                                                                                                              <  2:524373/150‑1 (MQ=255)
                              caaccaacTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCg                                                                                                             >  1:438795/1‑151 (MQ=255)
                               aaccaacTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCgg                                                                                                            <  2:478837/151‑1 (MQ=255)
                                  caacTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCa                                                                                                         <  1:526597/151‑1 (MQ=255)
                                    acTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGGGGCGAGGAGCTGGCTTTGCCGATAGCGCATCACCTCTTTGGTGAGTTCCGGCGGGGCGCGGGGAt                                                                                                        >  2:159664/1‑150 (MQ=255)
                                       gTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCttt                                                                                                    <  1:80159/151‑1 (MQ=255)
                                         cGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTc                                                                                                   <  1:413372/150‑1 (MQ=255)
                                         cGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTc                                                                                                   <  1:544286/150‑1 (MQ=255)
                                         cGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCa                                                                                                  <  2:1053530/151‑1 (MQ=255)
                                             cTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGcc                                                                                               >  1:700322/1‑150 (MQ=255)
                                                    tGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTgcgc                                                                                       >  1:605743/1‑151 (MQ=255)
                                                     gCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTgc                                                                                         <  2:672986/148‑1 (MQ=255)
                                                         aTGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcgc                                                                                  >  1:333005/1‑151 (MQ=255)
                                                         aTGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcg                                                                                   >  1:132580/1‑150 (MQ=255)
                                                            gagaATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTc                                                                               <  1:395696/151‑1 (MQ=255)
                                                               aaTTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACg                                                                            <  1:372312/151‑1 (MQ=255)
                                                               aaTTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACg                                                                            <  1:194475/151‑1 (MQ=255)
                                                                 ttCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGcc                                                                          >  2:39584/1‑151 (MQ=255)
                                                                   cAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCa                                                                         <  1:184013/150‑1 (MQ=255)
                                                                    aGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGcc                                                                          >  1:650757/1‑148 (MQ=255)
                                                                       cGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCggg                                                                    <  1:653406/151‑1 (MQ=255)
                                                                           gCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAc                                                                >  1:891875/1‑151 (MQ=255)
                                                                                aaGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcatcat                                                           <  1:80496/151‑1 (MQ=255)
                                                                                    ccAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGt                                                       <  1:599498/151‑1 (MQ=255)
                                                                                      aGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGa                                                     <  1:653316/151‑1 (MQ=255)
                                                                                       ggATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAt                                                    <  2:838267/151‑1 (MQ=255)
                                                                                       ggATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAt                                                    >  2:44534/1‑151 (MQ=255)
                                                                                       ggATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAt                                                    <  2:148244/151‑1 (MQ=255)
                                                                                              tgGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgccgcc                                             >  2:983155/1‑151 (MQ=255)
                                                                                               ggTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCt                                            <  1:46384/151‑1 (MQ=255)
                                                                                                 tAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGCGATTGCCGCCtt                                           >  1:179388/1‑150 (MQ=255)
                                                                                                  aGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCCGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTc                                          >  1:932540/1‑150 (MQ=255)
                                                                                                      gCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGc                                      <  1:611174/150‑1 (MQ=255)
                                                                                                       cacaATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGt                                    <  1:38370/151‑1 (MQ=255)
                                                                                                             aaccTGTGGCGTGGAGAGGATCTGGCTTTGCTGATAGCGCATCACCTCTTCTGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCTGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAt                              <  2:852066/148‑1 (MQ=255)
                                                                                                             aaaCTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGaa                               <  2:57465/150‑1 (MQ=255)
                                                                                                             aaaCTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAt                              <  1:44534/151‑1 (MQ=255)
                                                                                                                  gtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAtttt                           <  1:722285/149‑1 (MQ=255)
                                                                                                                   tgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTc                         >  2:524274/1‑150 (MQ=255)
                                                                                                                    ggCGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCa                        <  2:922800/150‑1 (MQ=255)
                                                                                                                      cGTGGAGAGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaag                     <  1:1051185/151‑1 (MQ=255)
                                                                                                                          gagaGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaaga                    >  1:762814/1‑148 (MQ=255)
                                                                                                                          gagaGGAGCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                 <  1:513946/151‑1 (MQ=255)
                                                                                                                            gaggagCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAcc               <  1:834248/151‑1 (MQ=255)
                                                                                                                              ggagCTGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGc             <  1:1013453/151‑1 (MQ=255)
                                                                                                                                   tGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGGCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGc         >  2:236214/1‑150 (MQ=255)
                                                                                                                                   tGGCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCt        >  2:859155/1‑151 (MQ=255)
                                                                                                                                    ggCTTTGCTGATAGCGCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTg       <  2:1031938/151‑1 (MQ=255)
                                                                                                                                         atcTGATAGCGCCTCCCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTg  >  1:512394/3‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                            
GTAACGCTGAAGTGATCGTGCTGTTAGCATCAACCAACTGTCGGGCTTGTTCTGCCCATGGAGAATTCAGACGATGCAGTAAGTCCAGGATCTGTGGTAGCTGCACAATAAACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG  >  NC_000913/3929231‑3929518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A