Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,492,667 C→T V229M (GTG→ATG)  idnO ← 5‑keto‑D‑gluconate‑5‑reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,492,6670CT100.0% 379.0 / NA 93V229M (GTG→ATG) idnO5‑keto‑D‑gluconate‑5‑reductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (51/42);  total (51/42)

GGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATA  >  NC_000913/4492521‑4492812
                                                                                                                                                  |                                                                                                                                                 
ggCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCgc                                                                                                                                                >  2:672344/1‑150 (MQ=255)
  cATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCgcagc                                                                                                                                             >  2:619785/1‑151 (MQ=255)
        cTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAAt                                                                                                                                       >  2:1120231/1‑151 (MQ=255)
        cTTTATCTCTTATTAGCGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAAt                                                                                                                                       >  2:496240/1‑151 (MQ=255)
          ttATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATc                                                                                                                                      >  2:741975/1‑150 (MQ=255)
            aTCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGt                                                                                                                                   >  2:1142241/1‑151 (MQ=255)
            aTCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGt                                                                                                                                   >  1:65579/1‑151 (MQ=255)
               tctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTcc                                                                                                                                >  2:183559/1‑151 (MQ=255)
                ctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCt                                                                                                                               >  2:687140/1‑151 (MQ=255)
                ctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCt                                                                                                                               >  1:281811/1‑151 (MQ=255)
                ctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCt                                                                                                                               >  1:496545/1‑151 (MQ=255)
                 ttattaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTg                                                                                                                              >  2:19284/1‑151 (MQ=255)
                  tattaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCt                                                                                                                               <  1:780976/149‑1 (MQ=255)
                   attaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGc                                                                                                                             <  1:387043/150‑1 (MQ=255)
                    ttaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCgg                                                                                                                           >  1:953856/1‑151 (MQ=255)
                        tGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGAtct                                                                                                                       >  1:628260/1‑151 (MQ=255)
                          ccAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTcc                                                                                                                     >  1:1132812/1‑151 (MQ=255)
                            aGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTcccc                                                                                                                   <  1:710139/151‑1 (MQ=255)
                            aGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTcccc                                                                                                                   <  2:908729/151‑1 (MQ=255)
                             gAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCa                                                                                                                  <  2:776161/151‑1 (MQ=255)
                                aaGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCg                                                                                                               >  1:350076/1‑151 (MQ=255)
                                aaGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCg                                                                                                               >  2:29466/1‑151 (MQ=255)
                                     gcgcTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTgcgg                                                                                                          <  2:860711/151‑1 (MQ=255)
                                     gcgcTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTgcgg                                                                                                          <  1:786605/151‑1 (MQ=255)
                                      cgcTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCA‑CAATCAGTTCCTGCGGATCTCCCCAGCGTgcggcg                                                                                                        <  2:268159/151‑1 (MQ=255)
                                          ttCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGcggcgg                                                                                                       <  2:214477/149‑1 (MQ=255)
                                          ttCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggg                                                                                                      <  2:324240/150‑1 (MQ=255)
                                           tCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGCGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggggg                                                                                                    >  2:114738/1‑151 (MQ=255)
                                            cgcgCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggggg                                                                                                    <  1:960189/150‑1 (MQ=255)
                                              cgcTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTcc                                                                                                 >  1:1075395/1‑151 (MQ=255)
                                              cgcTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCACAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTcc                                                                                                 >  2:176173/1‑151 (MQ=255)
                                                    aCGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGc                                                                                           >  1:574328/1‑151 (MQ=255)
                                                                tGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCgg                                                                               >  2:229732/1‑151 (MQ=255)
                                                                tGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCgg                                                                               >  2:158749/1‑151 (MQ=255)
                                                                 gTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCgg                                                                               >  2:393900/1‑150 (MQ=255)
                                                                 gTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCg                                                                                <  2:1087176/149‑1 (MQ=255)
                                                                 gTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGt                                                                              <  1:649426/151‑1 (MQ=255)
                                                                  ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTg                                                                             >  2:445621/1‑151 (MQ=255)
                                                                    aaaCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGa                                                                            <  1:685640/150‑1 (MQ=255)
                                                                      aCAGCCACTAACATGCCCCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAgg                                                                         <  2:688026/151‑1 (MQ=255)
                                                                       cAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGc                                                                        <  1:1200473/151‑1 (MQ=255)
                                                                        aGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGaa                                                                           >  2:170879/1‑147 (MQ=255)
                                                                          ccACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCtt                                                                      >  2:969759/1‑150 (MQ=255)
                                                                          ccACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTc                                                                     <  1:20695/151‑1 (MQ=255)
                                                                          ccACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTc                                                                     <  2:135121/151‑1 (MQ=255)
                                                                           cACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCg                                                                    <  2:123786/151‑1 (MQ=255)
                                                                              tAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGCCCGTTTGCACAACCAGGCGGGGAAGGCCTcttac                                                                 >  1:866359/1‑147 (MQ=255)
                                                                               aaCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTcc                                                                 >  1:322512/1‑150 (MQ=255)
                                                                               aaCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTcc                                                                 <  1:189245/150‑1 (MQ=255)
                                                                                aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggggg                                                                                                    <  2:632827/114‑1 (MQ=255)
                                                                                aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggggg                                                                                                    >  1:632818/1‑114 (MQ=255)
                                                                                aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCCGGCGGTGAAGGCTTCg                                                                    >  2:1119889/1‑146 (MQ=255)
                                                                                aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAAGCTTCGTCCTc                                                               >  2:736213/1‑151 (MQ=255)
                                                                                aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAAGCCTCGTCCt                                                                >  1:948653/1‑150 (MQ=255)
                                                                                  aTGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTc                                                               >  2:493936/1‑149 (MQ=255)
                                                                                    gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAcc                                                           <  2:25931/151‑1 (MQ=255)
                                                                                    gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAcc                                                           <  2:359400/151‑1 (MQ=255)
                                                                                    gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAc                                                            <  2:337634/150‑1 (MQ=255)
                                                                                      cgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAg                                                         <  2:399005/151‑1 (MQ=255)
                                                                                       gccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGt                                                        <  2:66584/151‑1 (MQ=255)
                                                                                       gccATCAACAAACAACAGGTGGCCG‑TTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTg                                                       <  1:373295/151‑1 (MQ=255)
                                                                                          aTCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCt                                                     >  2:853290/1‑151 (MQ=255)
                                                                                           tCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCtt                                                    >  2:1151982/1‑151 (MQ=255)
                                                                                                   caacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAACAGGGCTTTAGTCAtt                                            >  2:504201/1‑151 (MQ=255)
                                                                                                    aacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCAttt                                           <  2:65579/151‑1 (MQ=255)
                                                                                                    aacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCAttt                                           <  1:1133210/151‑1 (MQ=255)
                                                                                                           ggCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTTCGGCGTGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGttt                                     <  2:1098458/150‑1 (MQ=255)
                                                                                                           ggCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGtttt                                    >  2:1077406/1‑151 (MQ=255)
                                                                                                           ggCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGtttt                                    <  2:868744/151‑1 (MQ=255)
                                                                                                              cGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGaa                                 <  2:475465/151‑1 (MQ=255)
                                                                                                              cGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGGGCTTTAGTCATTTCTGtttt                                    >  1:751745/1‑148 (MQ=255)
                                                                                                               gTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGCGAAGGCCTCGTCCTCCACCCGGGGTTTTGTCATTTCTGtttt                                    >  1:1046857/1‑147 (MQ=255)
                                                                                                                tttACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGaaa                                >  2:1034119/1‑150 (MQ=255)
                                                                                                                 ttACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAAt                               <  1:189124/150‑1 (MQ=255)
                                                                                                                  tACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATa                              <  1:262521/150‑1 (MQ=255)
                                                                                                                    cGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGcc                           <  2:712189/151‑1 (MQ=255)
                                                                                                                     gAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTTGTCATTTTTGTTTTTAAATAAccc                          >  1:759657/1‑151 (MQ=255)
                                                                                                                     gAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGccc                          >  2:500650/1‑151 (MQ=255)
                                                                                                                         tCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCCGTGCTTTAGTCATTTCTGTTTTGAAATAACCCgg                        >  1:1168176/1‑149 (MQ=255)
                                                                                                                          cAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCCCTAACAAGGCTTTAGTCATTTCTGATTTGAAATAGccc                          >  1:202563/1‑146 (MQ=255)
                                                                                                                          cAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGAAGGCTTCGTCCTCAACCAGTGCTTTTGTCATTTCTGTTTTGAAATAGCCCgg                        >  1:1193706/1‑148 (MQ=255)
                                                                                                                            gagGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCaa                   <  1:945482/151‑1 (MQ=255)
                                                                                                                             agGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCaa                   >  2:126329/1‑150 (MQ=255)
                                                                                                                              ggCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAAt                  >  1:84562/1‑150 (MQ=255)
                                                                                                                               gCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGGTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGgcgc                     >  2:1110716/1‑146 (MQ=255)
                                                                                                                                  tttGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATAcc               <  2:357521/149‑1 (MQ=255)
                                                                                                                                  tttGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGt             >  2:224441/1‑151 (MQ=255)
                                                                                                                                   ttGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGt             <  2:628269/150‑1 (MQ=255)
                                                                                                                                    tGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt            <  2:677120/150‑1 (MQ=255)
                                                                                                                                     gaagaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTg           <  1:393897/150‑1 (MQ=255)
                                                                                                                                           aGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGCGCAGGCTTCGTCCCCAAACAGGGCTTTAGGCATTTCCTTTTTGAAATAGCCCGGCGCAAGACCGGTGACCCGa     >  1:796858/1‑150 (MQ=255)
                                                                                                                                            ggAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAat   <  1:1111968/151‑1 (MQ=255)
                                                                                                                                             gAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAata  <  1:608052/151‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
GGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATA  >  NC_000913/4492521‑4492812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A