Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F50 I2 R1
|
139 |
64.5 |
2139856 |
92.7% |
1983646 |
149.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,492,667 |
C→T |
V229M (GTG→ATG) |
idnO ← |
5‑keto‑D‑gluconate‑5‑reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,492,667 | 0 | C | T | 98.4%
| 241.2
/ NA
| 63 | V229M (GTG→ATG) | idnO | 5‑keto‑D‑gluconate‑5‑reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (34/28); minor base A (0/1); total (34/29) |
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATT > NC_000913/4492519‑4492814
|
aTGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCg < 1:533608/151‑1 (MQ=255)
tGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCgc > 1:872901/1‑151 (MQ=255)
ggCATAGTCCTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAGCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCgca < 2:784213/151‑1 (MQ=255)
tttATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATc > 2:367293/1‑151 (MQ=255)
tttATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATc > 2:592559/1‑151 (MQ=255)
ttATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATc < 1:283626/150‑1 (MQ=255)
tctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTcc > 1:880949/1‑151 (MQ=255)
ctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCt > 2:205825/1‑151 (MQ=255)
tattaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGc > 2:44154/1‑151 (MQ=255)
attaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGc < 1:322752/150‑1 (MQ=255)
attaGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGc < 2:780121/150‑1 (MQ=255)
aGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGAt < 1:644191/151‑1 (MQ=255)
aGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGAt > 2:611935/1‑151 (MQ=255)
aGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGAt < 1:156093/151‑1 (MQ=255)
aGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGAt > 1:11446/1‑151 (MQ=255)
aaGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCg > 1:166311/1‑151 (MQ=255)
cagcGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTgc > 1:131526/1‑151 (MQ=255)
cgcTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTgcggc < 1:688355/151‑1 (MQ=255)
cgcTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGGGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTgcggc > 2:185832/1‑151 (MQ=255)
tCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCggggg > 2:325187/1‑151 (MQ=255)
cgcTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTcc > 2:1003521/1‑151 (MQ=255)
cTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTcc < 1:812179/149‑1 (MQ=255)
tGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGtt > 2:1013157/1‑151 (MQ=255)
cACGTAGGGGGGCTGTTAAACAGCCGCTAACATGCCGCCATCAACAGACAACAGGTGGCCGTTTACGAAATCAGTGGCTTTTGAAGAAAGGAACATCGCATCACCAGTCAGTTCCTGCCGATCTCCCCAGCATGCGGCGGGGGTCCGttt < 2:869205/150‑1 (MQ=255)
ggggggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAAc < 1:936284/151‑1 (MQ=255)
gggggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAAcc < 2:373946/151‑1 (MQ=255)
gggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAAcc > 1:462489/1‑149 (MQ=255)
gggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAg < 2:10117/151‑1 (MQ=255)
gggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAg < 2:859286/151‑1 (MQ=255)
tAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGt > 1:143936/1‑149 (MQ=255)
aaaCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCgg > 1:717443/1‑147 (MQ=255)
aaaCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGa > 1:845977/1‑150 (MQ=255)
cAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAgg > 2:901533/1‑150 (MQ=255)
aaCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTc < 2:377703/149‑1 (MQ=255)
aaCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGAAGGCTTCGTcc > 2:170005/1‑150 (MQ=255)
aCATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTc < 1:50090/151‑1 (MQ=255)
cATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAATGCTTCGTCCTCa < 1:1027446/151‑1 (MQ=255)
gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAcc < 1:260219/151‑1 (MQ=255)
gccgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAAc < 2:92292/150‑1 (MQ=255)
cgccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCCTCGGCCTCAAcc > 2:784730/1‑149 (MQ=255)
gccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGt < 1:660923/151‑1 (MQ=255)
aacaaacaACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTa < 1:548105/151‑1 (MQ=255)
acaaacaaCAGGTGGCCGGTTACGAAATCAGAGGCTTTTGAAGAAAGGAACAACGCAGCACCAATCAGTTCCTGGGGATCTCCCCAGCGTGCGGCGGGGGTTCGGTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAg < 2:1034856/151‑1 (MQ=255)
aaacaaCAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTc < 1:175783/151‑1 (MQ=255)
aaacaaCAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAATGCTTTAGTc > 1:252259/1‑151 (MQ=255)
gTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCCTCCTCCTCAACCAGTGCTTTAATCATTTTTGtt > 2:781722/1‑151 (MQ=255)
ggCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGAAGGCCTCGTCCTCAACCAGTGCTTTTGTCATTTCTGtttt > 2:292029/1‑151 (MQ=255)
gAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGccc < 2:384752/151‑1 (MQ=255)
gAAATCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGccc > 2:725700/1‑151 (MQ=255)
tCAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGGCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCgg > 2:389281/1‑149 (MQ=255)
cAGAGGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGgcg < 1:617285/150‑1 (MQ=255)
agGCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCaa > 1:348593/1‑150 (MQ=255)
gCTTTTGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATAc < 1:1002810/151‑1 (MQ=255)
ttttGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGGGCAATAcc > 1:159115/1‑150 (MQ=255)
ttttGAAGAAAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGGGCTTTAGTCATTTCTGTTTTTAAATAGCCCGGCGCAATAcc > 1:861190/1‑150 (MQ=255)
aagaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGAc < 2:720299/151‑1 (MQ=255)
aagaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGAc > 1:936477/1‑151 (MQ=255)
aagaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCCGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGAc > 1:239836/1‑151 (MQ=255)
agaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGATTGCACAACCAGGAGGTGAAGGCCTCGGCCTCAAACAGTGATTTAGACATTTTTGTTTTGAAAAAGACCGGGGCAATACTGTTGaac > 2:233140/1‑149 (MQ=255)
gaaAGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGAcca < 2:940519/151‑2 (MQ=255)
aaaGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCCTCGGCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTg > 2:5233/1‑151 (MQ=255)
aaGGAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGGGGAGGCCCCGACCTCAAACAGGGCCTTAGTCCTTTCTGTTTTTCAACAGCCCCGCGCAATACCGtttgc > 2:1034516/1‑144 (MQ=255)
ggAACATCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAat < 2:994715/151‑1 (MQ=255)
acatCGCAGCCCCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGCCCTGAatat < 2:551924/150‑1 (MQ=255)
acatCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATAtt > 1:639909/1‑151 (MQ=255)
|
ATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGCAGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCAGGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCATTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGACCTGAATATT > NC_000913/4492519‑4492814
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
