Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 698,748 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583698,7480AT99.6% 633.5 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (111/153);  minor base G (0/1);  total (111/154)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583698,7490GC100.0% 628.2 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (111/154);  total (111/154)
*CP042583698,7500CG99.6% 618.9 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (110/154);  total (111/154)
Fisher's exact test for biased strand distribution p-value = 4.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 265 total aligned reads displayed.

TTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCA  >  CP042583/698470‑699025
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                    
ttCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGa                                                                                                                                                                                                                                                                              <  2:529769/289‑1 (MQ=255)
ttCCTGTGGGGGTTGAGGGGGGTAGCGAAGATCCAACCCGCGTGCGAACTGAAAGCATTTTTGAATTGATGGTTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGGGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGa                                                                                                                                                                                                                                                                              <  2:1865338/289‑1 (MQ=255)
      tggtggTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACAt                                                                                                                                                                                                                                                                        >  1:902800/1‑289 (MQ=255)
      tggtggTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACAt                                                                                                                                                                                                                                                                        >  1:781337/1‑289 (MQ=255)
           gtTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAc                                                                                                                                                                                                                                                                   >  1:2068595/1‑289 (MQ=255)
           gtTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAc                                                                                                                                                                                                                                                                   >  2:1010044/1‑289 (MQ=255)
           gtTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCCCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCTGTCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTGCAGCGTTTCGCATCCGGCATACATTTGa                                                                                                                                                                                                                                                                    >  2:419716/1‑288 (MQ=255)
            ttCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAc                                                                                                                                                                                                                                                                   <  1:509835/288‑1 (MQ=255)
              cACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACAACAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAcgcg                                                                                                                                                                                                                                                                <  1:1935007/289‑1 (MQ=255)
                cGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTc                                                                                                                                                                                                                                                              >  1:1965225/1‑289 (MQ=255)
                      tAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAg                                                                                                                                                                                                                                                        <  1:1180580/289‑1 (MQ=255)
                        gCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGCATACATTCGACGCGTTGCGAAGt                                                                                                                                                                                                                                                       >  2:1821036/1‑288 (MQ=255)
                             gATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                           <  1:301713/279‑1 (MQ=255)
                             gATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTa                                                                                                                                                                                                                                                 >  1:1847905/1‑289 (MQ=255)
                                  aaCCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGat                                                                                                                                                                                                                                            >  1:374168/1‑289 (MQ=255)
                                   aCCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTTCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGCAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATGTGCCGCGTCGCGAAGTTCTTTAGCgttt                                                                                                                                                                                                                                           >  1:2198358/1‑286 (MQ=255)
                                     ccggggggtgactgaAAACATTTTGGAATTGAGGGGGATTAAGCCAACCGGGCAGGGGGGGCAGGCG‑AGGGGGAGGTCCGAGAAAAACAACACGGGTTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGGGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAg                                                                                                                                                                                                                                                <  2:1514432/274‑1 (MQ=255)
                                        cgTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATcggc                                                                                                                                                                                                                                      >  2:84837/1‑289 (MQ=255)
                                           gCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcggg                                                                                                                                                                                                                                   <  1:1772673/289‑1 (MQ=255)
                                               actgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcggg                                                                                                                                                                                                                               >  1:1260295/1‑289 (MQ=255)
                                                ctgaAACCGTTTTTGAAATGAAGAGTATTAATGAAAGGGTGAGCGGGGGGCAGGCGCAGGGGAAGCGCGACGAACATGAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGACCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcggg                                                                                                                                                                                                                               <  2:1441006/288‑1 (MQ=255)
                                                ctgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggc                                                                                                                                                                                                                              <  1:1010044/289‑1 (MQ=255)
                                                ctgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcggg                                                                                                                                                                                                                               <  2:1260295/288‑1 (MQ=255)
                                                cgaaagcaaTTTTGGAATGGATGGGACTTAGGCCAACGTTGCACGGCGGGCGGGCGCAGGCGAAGCCCGACGAAAATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTGGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggc                                                                                                                                                                                                                              <  2:1834439/281‑1 (MQ=255)
                                                 tgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggcg                                                                                                                                                                                                                             <  1:577613/289‑1 (MQ=255)
                                                 tgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGGTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCGTTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAACAAATTGGACGCGTCTCGTACTTTTTTGACGCACTCggcgggccggcg                                                                                                                                                                                                                             >  2:1897805/1‑289 (MQ=255)
                                                  gaAACCATTTTTGAATGGATGGGTATTCCGCAAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGGGTTTATGCCAGTCGGCGCGTTTGGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGgcgc                                                                                                                                                                                                                            <  2:1543865/289‑1 (MQ=255)
                                                       cATTTTGGAATTGAGGGGTATTACGCAAACGTTGCACGGCGGGCAGGGCCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTGGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGcta‑cta                                                                                                                                                                                                                      <  2:2037431/289‑1 (MQ=255)
                                                         tttttGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CCAAt                                                                                                                                                                                                                    >  1:1405781/1‑289 (MQ=255)
                                                            ttgatttgatGGGTATTACCCCAACGTTGCACGGCGGGCAGGGGCAGGCGAAGCTCGAGGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  2:304572/289‑1 (MQ=255)
                                                            ttaagtggaggggTATGACGCGAAGGTGGCGAGGCGGGCAGGCGCGCGAGAGTCTCGGCGAACACAAGC‑CGGTGTGTATGCCAGTCGGGCGGTTTTGCCCGCGGCTGGAAAAACAATAGGCGGGGCGCTGGCGGATGGGCGGGCGTAACAGTGCACTTACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  2:292241/279‑1 (MQ=255)
                                                            ttGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  1:1821036/289‑1 (MQ=255)
                                                            ttGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGAGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  1:1951293/289‑1 (MQ=255)
                                                             tGAATTGATGGGTATTACGCAAACGTTGCACGGGGGGCCGGGGGCGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTAGGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTACGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCAt                                                                                                                                                                                                                <  2:1585908/289‑1 (MQ=255)
                                                             tGAATGGAAGGGAATTCAGCCACCGTTGCACGGGGGGCAGGGGGAGCGGAAGCCCGCCGACCACAAAC‑CGGGGTTTAGGCCAGTCGGGGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCAt                                                                                                                                                                                                                <  2:1405781/289‑1 (MQ=255)
                                                             ggaatggagtgttATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTGGACGAACATCACC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAACCAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATCCCCTGGCGGAACTGGCGACGCCATTTGCCGAAGGGGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCAt                                                                                                                                                                                                                <  2:1353071/277‑1 (MQ=255)
                                                                          tgtgcacacaCGTGGCGCGGCGTGCAGGCGGAGGCGAATCGCGGCGCAAAGAACC‑CGGGGTTTATGCCAGTCGGCGCGTTTGGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGt                                                                                                                                                                                                    <  2:677625/279‑1 (MQ=255)
                                                                          gtgaCGCCAAGGTGGAAGGGCGGGCGGGCGCACGGGAATCTCGACGAACATCCAC‑CGGGGTGTAGGCCAGTCGGCGCGTTGTGCGCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACAGACCCGGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTGCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCGTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGt                                                                                                                                                                                                    <  2:49425/285‑1 (MQ=255)
                                                                          aTTAGGCCAAGGTTGAGCGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGGGTTTATGCCGGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                   <  2:1485664/289‑1 (MQ=255)
                                                                          aTTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                   <  2:2068595/289‑1 (MQ=255)
                                                                          aTTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                   <  1:1753673/289‑1 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcggg                                                                                                                                                                                                                               >  2:732393/1‑258 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAgt                                                                                                                                                                                               >  1:1303633/1‑289 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAgt                                                                                                                                                                                               <  1:245923/289‑1 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGACATCGGCGGGCGGGGGCTC‑CTCATGCCCGGTACTCAAGGGTAAgt                                                                                                                                                                                               >  2:448583/1‑289 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAg                                                                                                                                                                                                                                                        >  2:295360/1‑228 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAg                                                                                                                                                                                                                                                        <  1:295360/228‑1 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATcgg                                                                                                                                                                                                                                       >  2:1751836/1‑245 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATg                                                                                                                                                                                          >  1:1207089/1‑289 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGAGTTTATGCCAGGCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGAAATCGGCGGGCGGGCCGGA‑CAAATGAATGGTACTGacgctgtgtcctata                                                                                                                                                                                          >  2:1818016/1‑275 (MQ=255)
                                                                                      ttGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  1:1634267/263‑1 (MQ=255)
                                                                                         cACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGGGGGGGGGCGCCC‑CCAACTCCGGGGTCTGAATGTGGAGTGTATGCTCAt                                                                                                                                                                                     >  2:1964940/1‑288 (MQ=255)
                                                                                              cggGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCAt                                                                                                                                                                                                                <  2:621690/256‑1 (MQ=255)
                                                                                                      cgcaggcgAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                           >  2:394560/1‑206 (MQ=255)
                                                                                                      cgcaggcgAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                           <  1:394560/206‑1 (MQ=255)
                                                                                                           gcgAAGCTCGACGAACATCAAC‑CGGGATTTATGCCAGTCGGGGCGTTTTGCCCGCCGCTGGAAAAACAACGGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAg                                                                                                                                                                   <  2:2096235/288‑1 (MQ=255)
                                                                                                             gAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGAt                                                                                                                                                                 <  1:1220337/288‑1 (MQ=255)
                                                                                                               ggctcagcgaACAGCAAC‑CGGTGTTTATGCCGGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                               <  2:8967/281‑1 (MQ=255)
                                                                                                                           aTCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 <  2:1132539/226‑1 (MQ=255)
                                                                                                                           aTCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 >  1:1132539/1‑226 (MQ=255)
                                                                                                                                     tgtTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                           <  2:1196743/176‑1 (MQ=255)
                                                                                                                                     tgtTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGa                                                                                                                                          <  1:1464237/288‑1 (MQ=255)
                                                                                                                                     tgtTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGa                                                                                                                                          <  1:448583/288‑1 (MQ=255)
                                                                                                                                          aTGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGa                                                                                                                                                                                                        >  1:2015491/1‑221 (MQ=255)
                                                                                                                                              cAGTGGGCGCGGTTGTCCGGCCGCAGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCt                                                                                                                                <  2:663435/289‑1 (MQ=255)
                                                                                                                                              cAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCt                                                                                                                                <  1:1587213/289‑1 (MQ=255)
                                                                                                                                               aGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTg                                                                                                                               >  1:96480/1‑289 (MQ=255)
                                                                                                                                                 tCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                           <  2:214373/164‑1 (MQ=255)
                                                                                                                                                 tCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGGAGTGTATGCGAATCCGCAGCGCTGCCCGCAGATCAATCTCAATGACCGTGAAGGGATGCCGGTGCCGTa                                                                                                                             >  2:891841/1‑289 (MQ=255)
                                                                                                                                                   ggCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATg                                                                                                                           <  1:619878/289‑1 (MQ=255)
                                                                                                                                                    gggcgTTTTGCCCGCCGCTGGAAAACCAACTGGCGAGGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATg                                                                                                                           <  2:781337/286‑1 (MQ=255)
                                                                                                                                                         ttttGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGaaaaa                                                                                                                      <  2:557071/288‑1 (MQ=255)
                                                                                                                                                               ccgacgggggAAAAACACCTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGAACATACCCGGGCGAAACTGGGGACGCCATGTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGac                                                                                                                <  2:1448980/280‑1 (MQ=255)
                                                                                                                                                                 gccgcTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 >  1:929487/1‑189 (MQ=255)
                                                                                                                                                                         aaaaaCAACTGGCGATGGGCGGGGGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAg                                                                                                     <  2:96480/289‑1 (MQ=255)
                                                                                                                                                                                    gccaTGCGCTGGCGGATGGGCGTGCGTAACAGTGCCCATACCCTGGCGACACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACACTGGTCGCGTCGCAATGTTCTCTATCGTTAGCGGAGGGCAGGCGGTACCTTATCCA‑GGTACTGCAGGTGCAGCGTATGCGAATCCGCAGGGCTCCCCGACGATCCAACCCATTGAACGTGAACGGATGCCGGGGGCGGATGAAAAACAGAGCACTTCTGGTGACGAgctcgcg                                                                                           >  2:1023162/4‑282 (MQ=255)
                                                                                                                                                                                       aTGCGCTGGCGGGTGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCca                                                                                        <  1:810837/288‑1 (MQ=255)
                                                                                                                                                                                                      ggCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAgg                                                                                                                                            <  1:871492/221‑1 (MQ=255)
                                                                                                                                                                                                          tgcgtAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCt                                                                                                                                <  1:42413/229‑1 (MQ=255)
                                                                                                                                                                                                               aaCAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg                                                                <  1:657930/288‑1 (MQ=255)
                                                                                                                                                                                                                    tGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTCTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 >  1:1515597/1‑138 (MQ=255)
                                                                                                                                                                                                                     gCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGgcgc                                                            <  1:671207/286‑1 (MQ=255)
                                                                                                                                                                                                                     gCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCa                                                           <  1:491304/287‑1 (MQ=255)
                                                                                                                                                                                                                      cacaTACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGCATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGTCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCCTTGACCGGGAAGGGATGCGGGTGCTGTATGAAAAACAGTACCCTGCGGGTAGCGCGGGACTGCCCCAAGCAAAAGATCCGGAAACCACGgcgccgag                                                        >  2:1284968/1‑285 (MQ=255)
                                                                                                                                                                                                                      cacaTACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGt                                                         <  1:2098345/288‑1 (MQ=255)
                                                                                                                                                                                                                          tACCCTGGCGAAACTGGGGGCGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCATCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGAtt                                                    <  2:1387400/289‑1 (MQ=255)
                                                                                                                                                                                                                          tACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGAtt                                                    <  1:179960/289‑1 (MQ=255)
                                                                                                                                                                                                                           aCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTAc                                                                                                                                                                                                           <  1:1018333/137‑1 (MQ=255)
                                                                                                                                                                                                                           aCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATTCGGGTGCTGTATGAAAAAAAGGACACTGCTGGTAGCGAGGTACTGCCACAAGCAAAAGATACGGAAACCACGGCGCAGGGGACTg                                                   >  1:1553614/1‑289 (MQ=255)
                                                                                                                                                                                                                              cTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAgt                                                                                                                                                                                               >  2:760644/1‑146 (MQ=255)
                                                                                                                                                                                                                              cTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATTCGGGTGCTGTATGAAAAACAGGACACCGCTGGTAGCGAGTTACTGCCCCAAGCAAAAGATCCGGAAACCACGGCGCATGGGATTGAGc                                                >  2:2212207/1‑289 (MQ=255)
                                                                                                                                                                                                                                ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGGGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGAGTGAGCGt                                              >  1:74735/1‑289 (MQ=255)
                                                                                                                                                                                                                                       cTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTTCTGTATGAAAAACAGGACACTGCTGGGAGCGTGTTACTGCCACAAGCAAAAGGTACGGAAACCACGGCGCAGGGGATTGAGCGTTGccatt                                       >  2:26074/1‑286 (MQ=255)
                                                                                                                                                                                                                                           cGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 >  1:1842229/1‑115 (MQ=255)
                                                                                                                                                                                                                                                              tGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGa                 <  1:407626/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ggCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGaatc              <  1:2212207/288‑3 (MQ=255)
                                                                                                                                                                                                                                                                     cTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGaatcgctga         >  2:329727/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                      tGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCa                                                                                                                                                                                                                 >  1:1403203/1‑88 (MQ=255)
                                                                                                                                                                                                                                                                       gCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGTTCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGaaa       >  1:1499527/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tttCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCa  >  2:163762/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                    
TTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAAC‑CGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTA‑CTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCA  >  CP042583/698470‑699025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A