Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 698,748 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583698,7480AT99.6% 519.4 / ‑5.0 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (101/118);  minor base C (1/0);  total (102/118)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01
*CP042583698,7490GC99.5% 512.9 / NA 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (100/118);  total (102/118)
Fisher's exact test for biased strand distribution p-value = 4.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583698,7500CG99.6% 512.3 / NA 220intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (101/118);  total (102/118)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 220 total aligned reads displayed.

TTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAG  >  CP042583/698470‑699026
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
ttCCTGTGGGGGTACTCGGGTTTAGCGAAGACCCAGCCCGCGTGCTGACTGAGACCATGTTTGAATTGATGGGTATTACGCCACCGTTGCCGGGCGGGCAGGCGCAGGCGAAGCTCGGCGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGa                                                                                                                                                                                                                                                                                <  2:242954/289‑1 (MQ=255)
 tCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGaa                                                                                                                                                                                                                                                                               <  1:1006385/289‑1 (MQ=255)
        gtggtTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTg                                                                                                                                                                                                                                                                        >  1:556727/1‑289 (MQ=255)
            ttCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGCTGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGGCTTTCCAGCGTTTCGCCA‑CCGGAATACATTGGAc                                                                                                                                                                                                                                                                     >  2:1272589/1‑288 (MQ=255)
                    gTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                             <  1:1700660/288‑1 (MQ=255)
                      tAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAg                                                                                                                                                                                                                                                          >  1:1294029/1‑289 (MQ=255)
                      tAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAg                                                                                                                                                                                                                                                          >  1:1118874/1‑289 (MQ=255)
                             gATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTa                                                                                                                                                                                                                                                   >  1:416689/1‑289 (MQ=255)
                              aTCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGAc                                                                                                                                                                                                                                                                     >  1:1043195/1‑270 (MQ=255)
                              aTCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTa                                                                                                                                                                                                                                                   >  1:1343730/1‑288 (MQ=255)
                                  aaCCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTTGCGat                                                                                                                                                                                                                                              >  1:1503614/1‑289 (MQ=255)
                                        cgTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACCCCTCGCGAAGTTCCTTAGCGataaccg                                                                                                                                                                                                                                         >  2:1745041/1‑284 (MQ=255)
                                        cgTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGGAACAGTGCACATACACTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGCGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATTCATTGGACCCGTTCCGAAGTTCGTTAGCCATACcggc                                                                                                                                                                                                                                        >  2:253380/1‑289 (MQ=255)
                                         gTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTCTAGCGATATcggcg                                                                                                                                                                                                                                       >  2:383954/1‑289 (MQ=255)
                                           gCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcggg                                                                                                                                                                                                                                     <  1:106148/289‑1 (MQ=255)
                                            ctgactgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAAGACATTGGACGCGTCGCGAAGCTCTTTAGCGAAATCggcgggg                                                                                                                                                                                                                                    >  2:1587021/1‑288 (MQ=255)
                                                ctgaAACCATTTGTGAATTGAGGGGGATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGGGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcggg                                                                                                                                                                                                                                 <  2:1294029/288‑1 (MQ=255)
                                                 tgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCGGGCGAAGCTCGACGAACATCAACCGGGGTTTAGGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggcg                                                                                                                                                                                                                               <  2:792152/289‑1 (MQ=255)
                                                 tgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggcg                                                                                                                                                                                                                               <  1:1346924/289‑1 (MQ=255)
                                                 tgaAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggc                                                                                                                                                                                                                                <  2:973463/288‑1 (MQ=255)
                                                     aCCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGctac                                                                                                                                                                                                                           <  1:1851803/289‑1 (MQ=255)
                                                            ttGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCa                                                                                                                                                                                                                    <  1:1583410/289‑1 (MQ=255)
                                                            ttGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCa                                                                                                                                                                                                                    <  1:1643753/289‑1 (MQ=255)
                                                            gggaagtgagggtgaTTCCGCCAACGGTGCACGGGGGGCAGGCGCAGGCGAAGAGCGACGAACATCCACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACGGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCa                                                                                                                                                                                                                    <  2:496417/275‑1 (MQ=255)
                                                                  tGATTGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCACGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCTTTTTGCCCGCCGCTGGAAAAACTACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCTAAGGTTAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTAc                                                                                                                                                                                                              <  1:1207255/289‑1 (MQ=255)
                                                                     tGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTg                                                                                                                                                                                                            <  1:464275/288‑1 (MQ=255)
                                                                      gggTATTACGCCAACGTTGCACGGCGGGCAGGCGCCGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGa                                                                                                                                                                                                           <  2:596294/288‑1 (MQ=255)
                                                                         tATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGt                                                                                                                                                                                                       >  1:1001614/1‑289 (MQ=255)
                                                                          aTTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                      <  1:1680415/289‑1 (MQ=255)
                                                                          aTTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCAGTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                      <  1:187473/289‑1 (MQ=255)
                                                                           ttACGCAAAAGTGGCAGGGGGGGCAGGGGCAGGGGAGGCAGGACGAACATCAGCCGGGGTTTAGGCCAGTGGGCGCGTTTGGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGGGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg                                                                                                                                                                                                      <  2:1882731/288‑1 (MQ=255)
                                                                            tACGCCAACGTTGCACGGCGGCCAGGCGCAGGCGAAGCCCGCAGAACATCACCCGGGGTTTAGGCCAGCCGGGGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGaa                                                                                                                                                                                                    <  2:656894/289‑1 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCgg                                                                                                                                                                                                                                                                                 >  1:768493/1‑210 (MQ=255)
                                                                              cGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAgt                                                                                                                                                                                                  >  1:672291/1‑289 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGaa                                                                                                                                                                                                                                                           >  1:936093/1‑227 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGGCTGGTACTGCAGGTGAAggttaag                                                                                                                                                                                             >  1:958103/1‑283 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATg                                                                                                                                                                                             <  2:1780862/289‑1 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGCCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACCCCTCGCGAAGTCCTTTAGCGATATCGGCGGGCGGGCGGCACTCATGCATTGTACTGTAGGTGAAGGATATg                                                                                                                                                                                             >  2:1550579/1‑289 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGGGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCTATTTCGGCGGGGGGGGGCGACTCATGCCTGGTATTGAAGGTGAAGTGGATg                                                                                                                                                                                             >  2:1332029/1‑289 (MQ=255)
                                                                                   aCGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCG‑GCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTAt                                                                                                                                                                                              >  1:1377051/1‑287 (MQ=255)
                                                                                                   aggcgcaggcgAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCt                                                                                                                                                                              <  1:1745041/288‑1 (MQ=255)
                                                                                                        caggggAGGCCCAACGAACATCAACCGGTGTTTATGCCGGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCg                                                                                                                                                                         <  2:1198382/288‑1 (MQ=255)
                                                                                                               agttCGCCGAACATCAACCGGGGTTTATGCCGGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGGGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                                  <  2:75022/285‑1 (MQ=255)
                                                                                                               aGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                                  <  1:155619/288‑1 (MQ=255)
                                                                                                               aGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGGATTTAAGGGGAAGTGTATGGCAGTCCGCGGGGCTGCCCGccaaccg                                                                                                                                                                  >  2:453930/1‑282 (MQ=255)
                                                                                                               aGCCCGACGAACATCACCCGGTGTTTATGCCCGTCGGCGGTTTTTGCCCGCCGCGGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATCCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                                  <  2:608887/288‑1 (MQ=255)
                                                                                                                 gtcaccgaACATCAACCGGGGTGTAGGCCAGCCGGTGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGAGGGGCTGGCGGATGGGCGGGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCAGTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAAt                                                                                                                                                                <  2:1648342/283‑1 (MQ=255)
                                                                                                                   cgacgaACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAAtctc                                                                                                                                                             >  1:157358/1‑289 (MQ=255)
                                                                                                                     acgaACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCAt                                                                                                                                                                                                                   <  1:597567/233‑1 (MQ=255)
                                                                                                                            tCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGt                                                                                                                                                    >  1:412193/1‑289 (MQ=255)
                                                                                                                             cAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTg                                                                                                                                                   <  2:412193/289‑1 (MQ=255)
                                                                                                                                 cGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAgg                                                                                                                                               <  2:1721736/289‑1 (MQ=255)
                                                                                                                                 cGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAgg                                                                                                                                               <  1:1888791/289‑1 (MQ=255)
                                                                                                                                 cGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAgg                                                                                                                                               <  1:296913/289‑1 (MQ=255)
                                                                                                                                   gtgtTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGa                                                                                                                                             >  1:544258/1‑289 (MQ=255)
                                                                                                                                    tgtTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTcgcg                                                                                                                                                                                                                                                             >  2:441520/1‑176 (MQ=255)
                                                                                                                                    tggttATGCCAGGCGGCGGGTTTTGGCCGCAGCTGGAAAAACAACTGGCGACGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGa                                                                                                                                             <  2:957023/285‑1 (MQ=255)
                                                                                                                                      tttATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGa                                                                                                                                                                                                                                                                                >  2:575041/1‑155 (MQ=255)
                                                                                                                                           gCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg                                                                                                                                     <  1:1491751/289‑1 (MQ=255)
                                                                                                                                            ccgtgcgggcggTTTTGCCCGCGGATGGAAAAACAACTGGCGATGCGCTGGAGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg                                                                                                                                     <  2:1901545/277‑1 (MQ=255)
                                                                                                                                            ccgggcGGGGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATCCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg                                                                                                                                     <  2:309462/283‑1 (MQ=255)
                                                                                                                                            ccAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg                                                                                                                                     <  1:968555/288‑1 (MQ=255)
                                                                                                                                            ccAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg                                                                                                                                     <  2:157358/288‑1 (MQ=255)
                                                                                                                                                tCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAACGCAGGGTACTGCAGGGGAAGGGTATGTTAATCCCCAGCGCTTCCCGCAGATCTATCTCATTTACCGGGCATGGATGCGGGTggcgta                                                                                                                                >  2:1542086/1‑284 (MQ=255)
                                                                                                                                                    cgcgTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGaa                                                                                                                            >  2:837438/1‑289 (MQ=255)
                                                                                                                                                         tttGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACa                                                                                                                       <  1:1332029/289‑1 (MQ=255)
                                                                                                                                                              ccgccgCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGaca                                                                                                                  <  1:1272589/289‑1 (MQ=255)
                                                                                                                                                                 ccgcTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGGTAATCCGCAGGGCTGCCCGCCGGACATACTCCTTGCACGTGAAGGGGTGCGGGTGGTGGATGAAAAACACGAAAct                                                                                                                >  2:909207/1‑288 (MQ=255)
                                                                                                                                                                                     gATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGcc                                                                                           <  1:1550579/288‑1 (MQ=255)
                                                                                                                                                                                                        gtgcgtAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGGATGAAAAACAAGACACTGCTGGTAGCGAGTTAC‑CGCCACAAGCAAAAGATCC‑GGaaa                                                                      >  1:1244490/1‑289 (MQ=255)
                                                                                                                                                                                                         tgcgtAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggc                                                                                                                                                                                                                                <  1:908505/136‑1 (MQ=255)
                                                                                                                                                                                                            ggaaCAGGGGACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCa                                                                   <  2:1377051/286‑1 (MQ=255)
                                                                                                                                                                                                              aaCCGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACg                                                                 <  1:1429191/288‑1 (MQ=255)
                                                                                                                                                                                                              aaCAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATAAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACg                                                                 <  1:1147796/288‑1 (MQ=255)
                                                                                                                                                                                                                 aGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCCGCGCTGCCCGCCGATCAATCGCATGGACCGTGAAAGGGTGCGGGTGCTGGATGAAAAACAGGACACCTCCGGTAGACAGTTAA‑GGCGCCAAGGAAAACACCC‑GAGAACCACGgagc                                                             >  2:47639/1‑289 (MQ=255)
                                                                                                                                                                                                                   tGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTTACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACAATGCTGGTAGGGGGTTAA‑TGCCACAAGCAAAAAATAC‑GGAAACACCGGCGCAg                                                           >  2:920966/1‑289 (MQ=255)
                                                                                                                                                                                                                   tGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAgg                                                                                                                     <  2:1363768/233‑1 (MQ=255)
                                                                                                                                                                                                                   tGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAg                                                           >  2:514791/1‑289 (MQ=255)
                                                                                                                                                                                                                   tGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATACCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTCACGTGTATGCTAATCCGCAGCGCTCCCCGCAGATTAACCTCATTGACCGGCACGGGATGCGTGCGCTGTATGAAAAAACGGACACTGCTTGTTGAGCGATAA‑TGCCACCACCCAAGAAACC‑GGAAAcccacgcgcac                                                           >  2:1394324/1‑280 (MQ=255)
                                                                                                                                                                                                                    gCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCa                                                            <  1:207058/287‑1 (MQ=255)
                                                                                                                                                                                                                    gCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGCTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGgcgc                                                             <  1:1587021/286‑1 (MQ=255)
                                                                                                                                                                                                                    gCACATACCCTCGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAAAACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTCATGCATGGTACTGAAGGAGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCACTCTCAATGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAAGACACTCGTGGTAGCGCGTTAC‑GGCCACAAGCAAAAGAACC‑GGAAACCACGGCGCAGt                                                          >  1:1870609/1‑289 (MQ=255)
                                                                                                                                                                                                                     cacaTACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCACCGCTGCCCGCAGATCAAACTCATTTACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGGCACAGCTTGTAGCCGGTTACGTGCC‑CCAGCAAAAAATAC‑GGAAACCACgcccgcggt                                                         >  2:1125541/1‑281 (MQ=255)
                                                                                                                                                                                                                        aTACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGGTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGAt                                                      >  1:1166283/1‑289 (MQ=255)
                                                                                                                                                                                                                          aCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTg                                                    >  1:644803/1‑289 (MQ=255)
                                                                                                                                                                                                                          aCCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCCACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTTAAGGGATGCGGGTGCTGTAGGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGACACAAGCATAAGATCC‑GGAGACCACGACGCAgcgactag                                                    >  2:1501933/1‑282 (MQ=255)
                                                                                                                                                                                                                             cTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGGAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGGGTTAC‑TGCCACAAGACAAAGATTC‑GGAAACCACGGCGCAATGGGTTGAGc                                                 >  2:690844/1‑289 (MQ=255)
                                                                                                                                                                                                                              tGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTCTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCg                                                <  1:383954/289‑1 (MQ=255)
                                                                                                                                                                                                                               ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGa                                                                                                                    >  2:1311226/1‑222 (MQ=255)
                                                                                                                                                                                                                               ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGa                                                                                                                    <  1:1311226/222‑1 (MQ=255)
                                                                                                                                                                                                                               ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCGt                                               >  1:1758718/1‑289 (MQ=255)
                                                                                                                                                                                                                               ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCGt                                               >  1:283239/1‑289 (MQ=255)
                                                                                                                                                                                                                               ggCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCGACGAATGCGTGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGGCCGCCGGTCAATCGCATTGACCGGTAAGGGGTGGGGGTGCTGTCTGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAGAATCCTGGAAACC‑CGGCGCCGTGGGATGAGCGt                                               >  2:201555/1‑289 (MQ=255)
                                                                                                                                                                                                                                gCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                                  <  2:1418957/175‑1 (MQ=255)
                                                                                                                                                                                                                                gCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa                                                                                                                                                                  >  1:1418957/1‑175 (MQ=255)
                                                                                                                                                                                                                                      cTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCGTTGCCtt                                         >  1:92819/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     tGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCggcgggcgggcg                                                                                                                                                                                                                               <  2:1060637/77‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAg                                                                                                        <  2:72277/196‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAg                                                                                                        >  1:72277/1‑196 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTCTTTCCAGCG‑TTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAg                                                                                                                                                                                                         >  2:1630693/1‑98 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
TTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCG‑TTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTAC‑TGCCACAAGCAAAAGATCC‑GGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAG  >  CP042583/698470‑699026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A