Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
CP042583 |
698,748 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | CP042583 | 698,748 | 0 | A | T | 99.6%
| 549.5
/ ‑4.0
| 231 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (94/136); minor base . (0/1); total (94/137) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
* | CP042583 | 698,749 | 0 | G | C | 99.6%
| 540.1
/ ‑4.5
| 231 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (93/136); minor base T (0/1); total (94/137) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 |
* | CP042583 | 698,750 | 0 | C | G | 99.6%
| 536.3
/ ‑6.6
| 231 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (94/136); total (94/137) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 231 total aligned reads displayed.
TTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATG > CP042583/698469‑699029
|||
tttCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCgg < 1:1641093/289‑1 (MQ=255)
cccGGGGTTAGCGAGGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAcgcg < 1:628693/287‑1 (MQ=255)
cACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCCGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAACCTGGCCACGC‑CATTTGCCGAAGGTGAGGCGATGCGTCCTTCCCGCGTTTCGCATCCGGAATACCTTGGAccg > 2:1814725/1‑286 (MQ=255)
cGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTTATGGGCTGCCTCTTTCCAGCGTTTAGCATCCGGAATACTTTGGAcgtct > 2:405587/1‑285 (MQ=255)
gTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg < 1:794199/288‑1 (MQ=255)
gTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTcgcg < 1:1301817/288‑1 (MQ=255)
ttaggcaaGGTCCAACCCGGGGGGTGGCGGAAACCATTTTTGAATTGATGGGGATTCCGCCAA‑CGTTGGACGGCGGGCAGGCGCGGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGaa < 2:1204526/283‑1 (MQ=255)
ttAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGa < 1:1714718/288‑1 (MQ=255)
tAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGTGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGAcgcg < 1:1021673/281‑1 (MQ=255)
gATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTa > 2:540705/1‑289 (MQ=255)
gATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTa > 2:849513/1‑289 (MQ=255)
aTCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTACAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGGAGGTCTTTAg > 1:154199/1‑289 (MQ=255)
tCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGc > 2:1114492/1‑289 (MQ=255)
tCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGc > 1:816344/1‑289 (MQ=255)
ccACCCAGCGTGGCGACTGAAACCATTTTGGAATTGCTGGGTATTCCGCCAA‑CGTTGCACGGCGGGCAGGGGCAGGGGAAGCTGGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCg < 2:1799500/289‑1 (MQ=255)
aaCCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGat < 2:550755/289‑1 (MQ=255)
cgTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑Tcggc > 1:1422772/1‑289 (MQ=255)
tggaAACCATTTTTGAATTGATGGGGTTTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCCCGACGAACATCAACCGGTGTTTATGCCAGTCGGGGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCggcgggcgggc < 2:335120/287‑1 (MQ=255)
ctgaGACAATTGTTGAATTGATGGTTATTACCCAAA‑CGTTGCGCGGGGGGCAGGCGCAGGCGAAGCTAGACAAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACGGTGCACATACCCTGGCGAAACGGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCggcgggcgggc < 2:672621/289‑1 (MQ=255)
ctgaAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCggcgggcgggc < 1:1137560/289‑1 (MQ=255)
ctgaAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCggcgggcggg < 2:1776845/288‑1 (MQ=255)
tgaAACCATTTTTGGATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCggcgggcgggcg < 1:1814725/289‑1 (MQ=255)
aCCATTTTTGCATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTCACAGTGCACATACCCTGGCGCAACTGGCGACGC‑CATTTGCCGCAGGTGAGGCGCTGCGTCTTTCCCGCGTTTCGCCTCCGGCAAACCTTTGACGCGTTGCGAAGTTCGTCAGCGATATTCggcgggtgtgtcc > 2:25484/1‑280 (MQ=255)
aCCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGctac < 1:510429/289‑1 (MQ=255)
aCCATTTTTGAATGGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGACGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACGGGCGACGC‑CATTTGCCGAAAGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGTAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGctac < 1:235729/289‑1 (MQ=255)
ttgttGAATTGATGGTTATTCAGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAAt < 1:1096511/286‑1 (MQ=255)
ttGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCa < 1:1174313/289‑1 (MQ=255)
ttGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCa < 1:318270/289‑1 (MQ=255)
tGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAt < 1:1749443/289‑1 (MQ=255)
tGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAt < 1:1075721/289‑1 (MQ=255)
gtagttgttgGGTCTTACGCCAA‑CGTTGCACGGGGGGAAGGCGAAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGTGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAt < 2:797049/285‑1 (MQ=255)
tGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTAc < 1:849513/289‑1 (MQ=255)
tGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTAc < 1:1213247/289‑1 (MQ=255)
tATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAt < 1:1048535/277‑1 (MQ=255)
gtgacaccAG‑CGTTGGACGGCGGTCAGGCGCAGGCGAAGCGCGACGAACATCAACCGGTGTTTATGCCGGTCGGGGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 2:1083953/283‑1 (MQ=255)
aTTACGGCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGt < 1:501954/288‑1 (MQ=255)
aTTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGt < 1:938773/288‑1 (MQ=255)
aTTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGt < 2:588476/288‑1 (MQ=255)
aTTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 1:1252689/289‑1 (MQ=255)
aTTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 1:1529770/289‑1 (MQ=255)
aTTACGCCAA‑CGTTGCAAGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 1:750566/289‑1 (MQ=255)
aTTACGCAAA‑CGTTGAGCTGCGGGAAGGCGCAGGGAAGGCTCGACGAAAGTCAACCGGTGTGTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 2:823748/289‑1 (MQ=255)
tACCCCAACCGTGGCACGTCGGGCAGGCGCAGGCGAAGCTCGCGGAACATCAACCGGGGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCATGCGTAACAGTGCACATACCCTGGCGAAACGGGCGACGC‑CACTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTg < 2:154199/288‑1 (MQ=255)
cGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGctacta > 2:1885088/1‑266 (MQ=255)
cGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGctacta < 1:1885088/266‑1 (MQ=255)
aagcaaacggggcgcggcggGTGGGCGCAGGCGAAGCTGGACGAACATCAACCGGGGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGaa < 2:1951229/274‑1 (MQ=255)
cAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAg < 1:542348/238‑1 (MQ=255)
a‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCTGCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGCACTGGAGGGGAAGTGTagt > 2:661062/1‑287 (MQ=255)
a‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGCTA‑TCGGCGGGGGGGCGCTAACAATGCCTGGTTCCGAAGGTGAAGTGTagg > 2:127731/1‑287 (MQ=255)
a‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATg > 1:1014303/1‑289 (MQ=255)
a‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACCAATGCATGGTACTGATggctgttccttat > 1:684709/1‑278 (MQ=255)
a‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCCGCACCAATGCATGGTACTGAAGGTGAAGTGTAt > 1:1269197/1‑288 (MQ=255)
cGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAt < 1:1119022/266‑1 (MQ=255)
gtggCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGGTGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTT‑TCGCTCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTa < 1:23188/286‑1 (MQ=255)
gcgtgggtggggcaaGCACGGCGAACTTCAGCGGGTGTTAGTGGCGTTCGGGGCGTTTCGCCCGCCGCTGGAAAACCAACTGGCGATGCGCTGGGTGATGGGCGTGCGTAACAGTGTACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAgcg < 2:488771/275‑1 (MQ=255)
gcaggcgcaggcGAAGCTCGAAGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAgcg < 1:280722/288‑1 (MQ=255)
gcaggcgAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGccc < 1:1457/288‑1 (MQ=255)
ggcgAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCGTTAGCGATA‑TCGGCTGGCGGGCTCCCCTAAAGCCTGGGACTGAAGGTGAAGTGTGTGCTAATCCGCAGCTCTACCCGCa > 1:1705255/1‑288 (MQ=255)
gCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCTGCGGGCGGGCGCTCCAAATGCAAGGTACTGACGGGGAAGGGTATGGTAATCCGCAGGGCTGCCCGCaaacaaat > 2:1122805/1‑282 (MQ=255)
cgaACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCAtt < 1:58240/289‑1 (MQ=255)
ttATGCGAGTCGGCGCGTTTTGCCCGCCGCTAGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTA‑‑‑‑ATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg < 1:432072/289‑1 (MQ=255)
ttATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCg < 1:1122805/289‑1 (MQ=255)
gCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCgggg > 1:972990/1‑287 (MQ=255)
gCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTg < 1:1278607/289‑1 (MQ=255)
aGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCACGGTACTGAAGGTGAAGTTTATGCTAATCCGCAGCGCTGCCCGCAGATCAACATCATTGACCGGGAAAGGATGCgggc > 2:1181797/1‑284 (MQ=255)
tCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGAcc > 1:1730683/1‑267 (MQ=255)
tCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAAGGTACTGAAGGGGAAGTGGATGCTAATCCGCAGCGCTGCCCGCAGAACCATCCCATTGACCGTGAAGGGAGTCGGGGGGTGTa > 2:136033/1‑289 (MQ=255)
cgcgTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCa < 2:1450315/251‑1 (MQ=255)
gTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGaaaaa < 1:1181797/289‑1 (MQ=255)
ccgccgCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGac < 1:1777388/288‑1 (MQ=255)
ccgcTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATGCGCAGCGCTGCCCGCAGATCACTCTTCTTTACCGTGAAGGGATGCGGGGGCTGGTGGAAAAACAGGACAct > 2:284419/1‑288 (MQ=255)
ccgcTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGGGCTGTATGAAAAACAGGACAct > 1:1620809/1‑288 (MQ=255)
cgcTGGGAAAACAACTGGGGAGGGGCTGGAGGAGGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACActg < 2:1619120/288‑1 (MQ=255)
aaaaaCAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTa < 1:1940523/288‑1 (MQ=255)
acTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTa > 1:1849491/1‑289 (MQ=255)
gcgcTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCt > 1:25592/1‑246 (MQ=255)
gtgcgtAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGGAGTGTATGCTAATCCGCAGCGCTGCCCGCAGCTCAATCTAATTTACCGTGAAGGGATGCGGGTGCTGTCAGAAAAACAGGACACTACTGGTGGCGGGTTACTGGCCCAAGCAAAAAAATCGGaaa > 2:1624915/1‑289 (MQ=255)
cgtAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCAAGGTACTGAAGGGGAAGTGTATGCTAATCCGCAGCGCTGCCCTCAGATCAATCTCATTGACCGGGAAGGGATTCGGGGGCTGTATGAAAAAAAGGACACTGCTGGTAGCGAGTTACCGCCCCAACAAAAAGATCCGGAAAcc > 2:1667749/1‑288 (MQ=255)
gtAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAA‑GTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg < 2:430441/289‑1 (MQ=255)
aagaGTGCCCATCCCCTGGCGAAACTGTCGACGA‑CATTTGGCGAAGGTGGGGCGCTGCGTCTTTCAAGCGTTTCGCATACGGAATAGATTGGACGCGGCGCGAAGTTCTTTAGAGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg < 2:1023590/285‑1 (MQ=255)
aaCAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGGGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg < 2:259119/288‑1 (MQ=255)
aaCAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTGTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg < 1:114605/288‑1 (MQ=255)
aaCAGGGCACATAGCCTGCAGAGACTCGCGTCGCGCGTTTG‑CTAGGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCACCCGGAATACATTGGACGCGTGGCGGAGTTCTTTAGCGATA‑TGGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACg < 2:29919/288‑1 (MQ=255)
tGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAg > 1:140520/1‑289 (MQ=255)
tGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAg > 1:1559354/1‑289 (MQ=255)
cacaTACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTGATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTg > 1:557631/1‑289 (MQ=255)
aTACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGAt < 1:1624915/289‑1 (MQ=255)
aTACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGGAGCGGGTTACTGCCACAAGCCAAAGATCCGGAAACCCCGGCGCAGGGGAt > 2:1379182/1‑289 (MQ=255)
aCCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTg > 1:50898/1‑289 (MQ=255)
aCCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTg > 1:39697/1‑289 (MQ=255)
cTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGt > 1:656231/1‑192 (MQ=255)
cTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGGTAGTTACTGCCACAAGCAAAAGAACCGGAAACCACTGCGCCGTGGACAGAGc > 2:912270/1‑289 (MQ=255)
cTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTTAGc > 1:450541/1‑289 (MQ=255)
ggCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAg > 1:286915/1‑234 (MQ=255)
cTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCtt > 1:38690/1‑288 (MQ=255)
cTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCACGGTACTGAAGGTGCAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCCATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGAACCGGGAACACCAGCGCACTGGCTTGAGAGTTTCGTTg > 2:1752245/1‑289 (MQ=255)
ttGCCGACGGTGAGGGGCTGCGTCTTTCCGGCGTTTCGCATCCGGAATACATTGGAAGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAAcc < 2:1769554/289‑1 (MQ=255)
aaGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGa > 2:365218/1‑238 (MQ=255)
gCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCCTGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGaaa > 1:1916882/1‑289 (MQ=255)
cTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTATATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATcc < 1:1199500/289‑1 (MQ=255)
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TTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAA‑CGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGC‑CATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATA‑TCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATG > CP042583/698469‑699029
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A