Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,510,186 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,510,1860GC99.5% 457.8 / NA 196intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (92/102);  total (94/102)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,510,1870CG99.5% 452.4 / NA 196intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (92/101);  total (94/102)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,510,1880TA99.0% 458.9 / NA 196intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (92/102);  minor base C (2/0);  total (94/102)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 196 total aligned reads displayed.

CGCGATCGTTGCCGCATTGGCTACCCACATTGGGCTAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCC  >  CP042583/1509907‑1510464
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
cgcgATCGTTGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGcc                                                                                                                                                                                                                                                                                >  1:624112/1‑288 (MQ=255)
    aTCGTTGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCcgcg                                                                                                                                                                                                                                                                            <  1:604132/288‑1 (MQ=255)
             gCATTGGCTACCCCCATTGGTGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCg                                                                                                                                                                                                                                                                  <  1:1120640/289‑1 (MQ=255)
               aTTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTc                                                                                                                                                                                                                                                                <  1:2047671/289‑1 (MQ=255)
               aTTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTc                                                                                                                                                                                                                                                                <  2:249997/289‑1 (MQ=255)
               aTTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACCGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAAtgctgcct                                                                                                                                                                                                                                                                 >  2:1931369/1‑286 (MQ=255)
                 tGGCTACCCACATTGGCGGAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTCGCGTGCAACTTTTTCCAGTACCTGCTCAACGCTACCACTGAATCCCAACCGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCACTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAg                                                                                                                                                                                                                                                              <  1:820500/289‑1 (MQ=255)
                 tGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAg                                                                                                                                                                                                                                                              <  1:1947529/289‑1 (MQ=255)
                   gCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGTACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGCGGCTTCATTACCAAACGACAGGCCCGCAGAATGCAGCCTCAGc                                                                                                                                                                                                                                                             >  2:328581/1‑288 (MQ=255)
                        ccACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGACCGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGCCAGGCCCGCGTAATGACGCGTCCGCCCTAc                                                                                                                                                                                                                                                        >  2:1810192/1‑288 (MQ=255)
                               ggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCg                                                                                                                                                                                                                                                 >  1:562004/6‑288 (MQ=255)
                               ggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCg                                                                                                                                                                                                                                                 >  2:361071/6‑288 (MQ=255)
                                     gCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAAt                                                                                                                                                                                                                                          >  1:1345529/1‑289 (MQ=255)
                                               cGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTccc                                                                                                                                                                                                                                 <  2:624112/288‑1 (MQ=255)
                                                 tcggAACGCCAGGTCGGGGCCTGGCCGGCAGCTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAAGAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAg                                                                                                                                                                                                                               <  2:1885555/286‑1 (MQ=255)
                                                   ggAAAGCCAGTGCGGGGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGc                                                                                                                                                                                                                             <  2:38949/288‑1 (MQ=255)
                                                              gCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGACAGCCCTACCAGCCCGTCGAAAATTACATCCCAGGCGTTCATCCcac                                                                                                                                                                                                                  >  2:501090/1‑288 (MQ=255)
                                                                  tGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAAAGGTGACGGGTAGAGGCTTCATTACCAAAGGAACGGCCCGCGTAATGATGCCTCAGCCCTACCATCCCGTCCAAATTGACTTCCCAGGCGTTCactctcccacc                                                                                                                                                                                                              >  2:2081387/1‑278 (MQ=255)
                                                                       ggCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAAtt                                                                                                                                                                                                                                         <  2:1518595/256‑1 (MQ=255)
                                                                             cAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGaaaaa                                                                                                                                                                                                  >  1:1014719/1‑289 (MQ=255)
                                                                              aaCTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTAAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGaaaaa                                                                                                                                                                                                  >  1:350790/1‑288 (MQ=255)
                                                                                    ttCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc                                                                                                                                                                                           <  1:2085442/289‑1 (MQ=255)
                                                                                    ttCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc                                                                                                                                                                                           <  1:1747759/289‑1 (MQ=255)
                                                                                                  cATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTg                                                                                                                                                                             <  1:368235/289‑1 (MQ=255)
                                                                                                    tCGCTACCACTGAATCCCAACTGCCGCAGCACCGGAATAAACGGACGCCCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTGTCATTTTAAGTAAGCCCTGCTTCGCGGCCAGTCGCGGGTTAGACCCCTG‑AAAACGTTGACGGGAAGAGGCTTCACTACCAAAAGATAGGCCCGCATAATGATGCGGTCTCCCTACCTACCCGTCGAACATGAACTCACAGGCCTGCATTGCACCGCCTCACTCGAGAAAGCCATCCCGGGGtccaaccagag                                                                                                                                                                           >  2:784011/1‑279 (MQ=255)
                                                                                                    tCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGc                                                                                                                                                                           >  2:1012282/1‑289 (MQ=255)
                                                                                                    tCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCAGCGCACCCCCTCACCCGAAAAATCCAGCCCGGGGTTAAGCGTGGc                                                                                                                                                                           >  2:1278296/1‑289 (MQ=255)
                                                                                                       cTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCAGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  1:921519/289‑1 (MQ=255)
                                                                                                        taacgcTGCATCCCAGCTGACGCAGCACCGGAATAAGCGGACGCTCGGGCGGCGGGATCGCGGCATGGGGGAAGACCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTGCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGGGACGGGTAGAGGCTTCATTACCAAACGACCGGCCCGCGTAATGATGCGTCAGCCCTAGCGGCCCGTCGAAATTGACTTACCAGGCGTTCGTCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  2:2250046/283‑1 (MQ=255)
                                                                                                        tACCCCTGAACCCCACCAGACGCAGCAGCGGAGTAAACGAACGCGCGGGCGGCGCGTTCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCGGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCTTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  2:1484329/288‑1 (MQ=255)
                                                                                                        tACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGTGAATCCCGCATCGGAAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACGTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  1:1826575/288‑1 (MQ=255)
                                                                                                        tACCACGGAATCCCAACTGGGGAAGGACCGGAATAAACGGACGCGAGTGCGGCGGGGTCACGGCCTGGGGGAATCCCGCATCGGGAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCGGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  2:2191815/288‑1 (MQ=255)
                                                                                                         aCCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCa                                                                                                                                                                      <  1:2081387/289‑1 (MQ=255)
                                                                                                         aCCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCa                                                                                                                                                                      <  1:1929148/289‑1 (MQ=255)
                                                                                                             cTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc                                                                                                                                                                                           <  1:1967513/264‑1 (MQ=255)
                                                                                                                aaTCCCAACGGACGCAGCACCGGAATAAACGGACGCGCGAGCGGCGGGAGCACGGCCTGGGGGAATCCCGCATCGGGAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGGCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTa                                                                                                                                                                <  2:1876701/288‑1 (MQ=255)
                                                                                                                  tCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATc                                                                                                                                                                                                <  2:2089144/254‑1 (MQ=255)
                                                                                                                  tCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaacg                                                                                                                                                             >  1:1682924/1‑287 (MQ=255)
                                                                                                                       gaggACGCAGCACGGAAGTAACCGTACGCGCGTGGGGCTGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaacgagtc                                                                                                                                                         <  2:399744/285‑7 (MQ=255)
                                                                                                                       aCTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc                                                                                                                                                                                           <  1:1509326/254‑1 (MQ=255)
                                                                                                                        cTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGcaccac                                                                                                                                                                                                               >  1:1193010/1‑233 (MQ=255)
                                                                                                                        cTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGcaccac                                                                                                                                                                                                               <  2:1193010/233‑1 (MQ=255)
                                                                                                                            cGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCCAAATTGACTTCCCAGGCGTTCATCGCCCCACCCCATCGGAAAAATCCAGCCCGGGGTTAAGCGGGGCGGGCAATGTTAAACAGTccgaac                                                                                                                                                    >  2:1797308/1‑283 (MQ=255)
                                                                                                                             gcagcaCCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaacgagtccgactc                                                                                                                                                   >  2:1420148/1‑276 (MQ=255)
                                                                                                                                  aCCGGAATAAACGGACGCTCGTGCGGCGGGCTCCGCGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCt                                                                                                                                             <  2:1369330/289‑1 (MQ=255)
                                                                                                                                           aaCGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        >  1:1221708/1‑253 (MQ=255)
                                                                                                                                           aaCGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg                                                                                                                                                                        <  2:1221708/253‑1 (MQ=255)
                                                                                                                                           aaCGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCg                                                                                                                                     >  1:1860538/1‑288 (MQ=255)
                                                                                                                                           aaCGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCg                                                                                                                                     >  1:1557990/1‑288 (MQ=255)
                                                                                                                                             cGGACGCTCGTGCGGGGGGTTCACGGCCTGGGGGAACCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCGTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc                                                                                                                                  <  2:953610/289‑1 (MQ=255)
                                                                                                                                             cGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc                                                                                                                                  <  1:1167030/289‑1 (MQ=255)
                                                                                                                                                aCGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCAt                                                                                                                                <  1:1000912/288‑1 (MQ=255)
                                                                                                                                                 cGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgc                                                                                                                              >  1:644013/1‑289 (MQ=255)
                                                                                                                                                 cGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgc                                                                                                                              >  1:514848/1‑289 (MQ=255)
                                                                                                                                                 cGCTCATGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaac                                                                                                                                                              >  1:1665718/1‑256 (MQ=255)
                                                                                                                                                          ggcggGATCCCGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCGTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAt                                                                                                                      <  1:1810192/288‑1 (MQ=255)
                                                                                                                                                                 tCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAAt                                                                                                                                                                                                 <  1:294609/206‑1 (MQ=255)
                                                                                                                                                                 tCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGc                                                                                                               <  2:2157698/288‑1 (MQ=255)
                                                                                                                                                                     ggCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATAcc                                                                                                          <  1:2159779/289‑1 (MQ=255)
                                                                                                                                                                           ggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaac                                                                                                                                                              <  1:1580145/231‑2 (MQ=255)
                                                                                                                                                                           ggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGgcg                                                                                                     >  2:1136812/1‑288 (MQ=255)
                                                                                                                                                                              gAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTg                                                                                                  <  1:1420148/288‑1 (MQ=255)
                                                                                                                                                                                 tCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCCTCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCCCAGTAATCTGCGGCCTACCCAGCCCTGGGGc                                                                                              >  2:1827029/1‑289 (MQ=255)
                                                                                                                                                                                 tCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGCCTCCAGGCCCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCCGGCGCTGGGGc                                                                                              >  1:1034476/1‑289 (MQ=255)
                                                                                                                                                                                  cccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCg                                                                                             <  1:239265/289‑1 (MQ=255)
                                                                                                                                                                                   ccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa                                                                                            >  1:1526037/1‑289 (MQ=255)
                                                                                                                                                                                   ccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa                                                                                            <  1:2193394/289‑1 (MQ=255)
                                                                                                                                                                                     gCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATg                                                                                          <  1:1278296/289‑1 (MQ=255)
                                                                                                                                                                                           gCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTAcc                                                                                    >  1:2156879/1‑289 (MQ=255)
                                                                                                                                                                                           gCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAATCCGACCCCAGGCTCGCCATCCGCCATGCCGCCTAATCCGCCGCAAACCCGGCCCTGGGGCGATGGttca                                                                                     >  2:2119551/1‑286 (MQ=255)
                                                                                                                                                                                            cAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTAcc                                                                                    <  1:1373653/288‑1 (MQ=255)
                                                                                                                                                                                               gtgtcttCATTTGCATGCAGCCCTGCTCCGACGCTAGTCGCGGGTTAG‑CACCCGAAAAACGGTGACGGGTAAGGGCTTCCTTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGa                                                                                 <  2:848135/283‑1 (MQ=255)
                                                                                                                                                                                                      cATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCt                                                                                                                                             <  1:1523502/221‑1 (MQ=255)
                                                                                                                                                                                                          ttCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATc                                                                                                                     <  2:1670409/241‑1 (MQ=255)
                                                                                                                                                                                                          ttCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATgcc                                                                     >  1:2102036/1‑289 (MQ=255)
                                                                                                                                                                                                           tCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAg                                                                                                                                                                                                                                                              <  2:677435/103‑1 (MQ=255)
                                                                                                                                                                                                           tCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAg                                                                                                                                                                                                                                                              >  1:677435/1‑103 (MQ=255)
                                                                                                                                                                                                               tAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGCCAAAATTGCCTTCCCA‑GCGTTTCCCCCCCCCCCCCAACCGCAAAAACCAACCCCGGGTTAAGCCTTGCGGGCCAAGTTAAACAGGCCCACCCCCGGGCCCCCACCCGCCCTGCCCCGTAAACCGCGGCAAACCCAGGGCGTGGGCGGTGGTTGACCGAAGACCCAAATCCGCCCaa                                                               >  2:1335945/1‑289 (MQ=255)
                                                                                                                                                                                                                aaGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGTCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGaa                                                               <  1:852020/289‑1 (MQ=255)
                                                                                                                                                                                                                    gcTGGTTCGCCGCCGGGAGAGGGTTAGAGACCTG‑AAAACGGTGAAGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                           <  2:2164002/288‑1 (MQ=255)
                                                                                                                                                                                                                    ccTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                           <  1:465635/289‑1 (MQ=255)
                                                                                                                                                                                                                    ccTGCTTCGCCGCCAGGCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                           <  2:562004/289‑1 (MQ=255)
                                                                                                                                                                                                                     tcgCTTCGCCCCCAGTCGCGTGTTGGACACCTG‑AAACCGGTGCGCGGGAGAGGCTTCATTACCAAACGACCGGCCCGCGTAATTATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg                                                          <  2:1034476/287‑1 (MQ=255)
                                                                                                                                                                                                                     cTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg                                                          <  2:1557990/289‑1 (MQ=255)
                                                                                                                                                                                                                       gCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGccc                                                                                                                                                                                                                                                                               >  1:1611048/1‑74 (MQ=255)
                                                                                                                                                                                                                       gCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTg                                                                                                                                                                             >  1:1489853/1‑172 (MQ=255)
                                                                                                                                                                                                                       gCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCCTGCCCAGTAATCTGCGGCATACCAGGCGCTGGGGCGGTGGTTACCGGAAGCACCAATTCCGCCGAATGgcccc                                                        >  2:1235131/1‑286 (MQ=255)
                                                                                                                                                                                                                                  aGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGccc                                                                                                                                                                                          <  2:1831982/148‑1 (MQ=255)
                                                                                                                                                                                                                                  aGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGccc                                                                                                                                                                                          >  1:1831982/1‑148 (MQ=255)
                                                                                                                                                                                                                                                    tG‑AGAACGGTGTCGGGCAAGGGTGACATTACCAAGCGACAGGCCCGCGTAATGGGGCTTCATCCCTACCACGCCGTCAAAATTGACTGCCCAGGCGTTCATCGCACCACCGCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACACCAGGCTCGCCATCGGCCATGCGCAGTAACCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt                           <  2:1608535/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    tG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt                            >  1:1885473/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       aaaaCGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGc                                                                                                               >  1:701626/1‑203 (MQ=255)
                                                                                                                                                                                                                                                       aaaaCGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGc                                                                                                               <  2:701626/203‑1 (MQ=255)
                                                                                                                                                                                                                                                            ggTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTa                    >  1:2008106/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTaa                   <  1:1260896/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              ggACGGGAAGAGGCTTCATAACCAAACAACAGGCCCCCGTAATTAGTCGTCAGCCTTCTCAGCCCGTCGAATTTGACTTCCCAGGCGTTCACCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTaa                   <  1:223249/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCCGCCCCGGTAAGCGGTTTGTTCCTGTTAACAATCCCCCCCagcg    >  2:1184883/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              cATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATgagcaggt                                                                                   <  1:110447/208‑8 (MQ=255)
                                                                                                                                                                                                                                                                              cATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATgagcaggt                                                                                   >  2:110447/1‑201 (MQ=255)
                                                                                                                                                                                                                                                                               aTTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGCATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGcccc  >  1:1001837/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
CGCGATCGTTGCCGCATTGGCTACCCACATTGGGCTAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTG‑AAAACGGTGACGGGTAGAGGCTTCATTACCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCC  >  CP042583/1509907‑1510464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A