Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,510,186 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,510,186 | 0 | G | C | 99.5%
| 502.7
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (106/105); total (107/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,510,187 | 0 | C | G | 99.1%
| 482.9
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base G (105/104); total (107/105) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,510,188 | 0 | T | A | 98.1%
| 485.6
/ NA
| 212 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (104/102); minor base C (2/2); total (107/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
GCGATCGTTGCCGCATTGGCTACCCACATTGGGCTAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCT > CP042583/1509908‑1510465
|||
cgATCGTTGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACCCCTGAAAACGGTGAAGGGTAGAGGCTTCATTA‑CCCAACCACAGGCCcg > 2:1483825/1‑288 (MQ=255)
gATCGGTGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAGTAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCcgcg < 2:84734/289‑1 (MQ=255)
cGTTGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTa < 2:1090114/288‑1 (MQ=255)
tgctgcATTGGCTACCAACATGGGGGAGGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCATGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAatga < 2:1222317/289‑1 (MQ=255)
tGCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAatg < 1:900559/288‑1 (MQ=255)
gCCGCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAatgat > 2:1027124/1‑289 (MQ=255)
gCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCg < 1:1217674/289‑1 (MQ=255)
gCATTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCg < 1:1269752/289‑1 (MQ=255)
gCATTAGCTACCCACATTGGCGAAGCTGAACTGACGCTGGAAAGCCAGGTCGGGGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCg < 2:1148758/289‑1 (MQ=255)
aTTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCCAGGGCTTTCATCTTCAGTAAGCCCTGCTTACCCGCCCGTCGCGGGGTTAGCCACCCGAAAACGGTGCCTGGTAAAGGCTTCATCACCCAAAGCCACGGCCcgtaaacgactcg > 2:923262/1‑277 (MQ=255)
aTTGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAAT‑CCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCa > 2:1439581/1‑289 (MQ=255)
ttGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCa > 1:32746/1‑289 (MQ=255)
tGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTGATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAg < 1:1792278/289‑1 (MQ=255)
tGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAg < 1:1027124/289‑1 (MQ=255)
tGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAg < 1:566260/289‑1 (MQ=255)
tGGCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAg < 1:1410056/289‑1 (MQ=255)
gCTACCCACATTGGCGAAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGc > 1:955830/1‑288 (MQ=255)
ttggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTTCTTCGCCGCCAGTCGC‑GGGTTAGACACCCGAAAACGGTGACGGGGAGAGGCTTCATTA‑CCAAACGCCAGGCCCGCCTAATCACTGGTCACCCCTAcccccc > 2:1793925/8‑284 (MQ=255)
ttggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAg > 1:1773392/8‑277 (MQ=255)
ttggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGcc > 1:1569425/8‑288 (MQ=255)
ttggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGAAGCGGCCGCCCTACCAccc > 2:301788/8‑288 (MQ=255)
tggcgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGccc > 1:1008891/7‑288 (MQ=255)
cgaaGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCCGCACCCCTAACATCCCTTcc > 2:1580965/4‑288 (MQ=255)
aaCTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGa < 1:1834371/288‑1 (MQ=255)
aaCTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGa < 1:342046/288‑1 (MQ=255)
gCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGcac > 1:1442915/1‑288 (MQ=255)
ggCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGACCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGGTAGACACCTGAAAACGGTGACGGGTATAGGCTGCATTC‑CCAAACGACAGGACCGAGTAATGATGCGTCAGCCCTACCAGCCCGACCAACTTGAATTCCGAGGCGATCATCGGACCACCACACCg > 2:561291/1‑289 (MQ=255)
gtggcaCTTTTGCCCGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGCGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCCGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGaa < 2:431037/284‑1 (MQ=255)
aaCTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCACCACGGaaaaa > 2:1138390/1‑288 (MQ=255)
aCTTTTTCCATTACCTGATCACCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATc < 2:334526/289‑1 (MQ=255)
tttttCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGAGGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCa < 1:815011/289‑1 (MQ=255)
tttCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGc < 1:1464060/289‑1 (MQ=255)
ttCCAGTACCTGGTCATCGCTGACACGAAACCCCAACTGACGCCGCACCGGAATAAACGGACGCGCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGATGCTACATTA‑CCAAACGCCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc < 2:1541085/289‑1 (MQ=255)
ttCCAGTACCTGCTCATCGCTACCCCGGAATCCCAACTGGCGCAGCACCGGAATAAACGGACGCTCGGGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc < 2:1903490/289‑1 (MQ=255)
ttCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGcc < 1:979701/289‑1 (MQ=255)
tCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGccc < 1:169701/289‑1 (MQ=255)
gCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCCCCACCTCATCGGAAAACTCCAGCCCGGGGGTAAGc > 2:757797/1‑289 (MQ=255)
gCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGc > 1:1319650/1‑289 (MQ=255)
gCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGc > 1:1379790/1‑289 (MQ=255)
cATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTg < 1:1059941/289‑1 (MQ=255)
cGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCg > 1:1854896/1‑289 (MQ=255)
cacccACTGAATCCCAACTGAAGCAGAACCGGAATAACCGGACCATCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg < 2:1854896/286‑1 (MQ=255)
acacaccggaTCCCAACTGAAGCAGCACCGGAATAACCGGGAGCTCGTGCGGCGGGATACCGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTACGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCggg < 2:1686981/279‑1 (MQ=255)
ccACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCACCGGACAAATCCAGCCCGGGGGTAAGCGTGGCGGGcc > 2:1344253/1‑287 (MQ=255)
tCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCCGGCGTTCATCGCACCACCCCACCGGAAAAATCCAACCCGGGGGTAAGCGCGGCGGGGACTGGTaaa > 2:1653461/1‑287 (MQ=255)
tCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGGGGCGGGCAATGTTaacg > 1:61475/1‑287 (MQ=255)
aCTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaacgagtcc < 2:1694615/289‑8 (MQ=255)
cGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCCGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTaacgagtccgact > 2:260583/1‑277 (MQ=255)
cGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc < 1:572749/289‑1 (MQ=255)
cGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc < 2:829263/289‑1 (MQ=255)
ggACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCgggg < 1:504354/236‑1 (MQ=255)
ggACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCgggg > 2:504354/1‑236 (MQ=255)
aCGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCCGCCAt > 2:1592070/1‑288 (MQ=255)
cGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgc > 1:1433118/1‑289 (MQ=255)
cGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTACGACTCCAGGCTCGCCATCGGCCATgc > 1:189329/1‑289 (MQ=255)
tCGTGCGGCGGGATCACGGCCTGGGGGAAT‑CCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCa < 1:1439581/288‑1 (MQ=255)
ggaggaaTCACGGCCTGGGGGATTCCCGCATTGGCAAGGGCTTTCATTTTCAGTAATCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAt < 2:177350/282‑1 (MQ=255)
ggATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCg > 1:1448086/1‑289 (MQ=255)
ggATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTCCg > 1:191728/1‑289 (MQ=255)
ggCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATAcc < 1:258902/289‑1 (MQ=255)
cTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAgg < 1:1724800/289‑1 (MQ=255)
gggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAg > 1:396672/1‑268 (MQ=255)
gggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAg < 2:396672/268‑1 (MQ=255)
ggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGgcg > 1:114080/1‑288 (MQ=255)
ggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGCGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGgc > 1:987613/1‑287 (MQ=255)
ggggAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCCCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAAGAGTCCGACTCCAGGCCCCCCATCCGCCATGCGCAGTAATCGGCGGCCTACCAGgcc > 2:1571411/1‑287 (MQ=255)
tCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGc > 1:820519/1‑289 (MQ=255)
ccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa < 1:1592070/289‑1 (MQ=255)
ccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa < 1:757797/289‑1 (MQ=255)
ccGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa < 1:1112039/289‑1 (MQ=255)
gCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGctgg > 1:1603450/1‑285 (MQ=255)
gggCTTTCATTTTCAGTCAGCCCTGCTTCGCCCCCCGGCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAACCGACAGGCCCGCGTAATGATGCGTCAGCCCTCCCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGa < 2:822472/288‑1 (MQ=255)
tttCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGtt < 1:357270/147‑1 (MQ=255)
tCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCCGCGTCACCTGCGGCATACCAGGCGCTGGGGCGCTGGTTCCCGGAGGCCCCa > 2:1393870/1‑289 (MQ=255)
ccagCTACGACGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCGTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCGGCCGAATGgc < 2:1375928/286‑1 (MQ=255)
ccTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc < 1:1580965/289‑1 (MQ=255)
cTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg < 1:649424/289‑1 (MQ=255)
cTGCTTCGCCGCCAGCGGC‑GGGTTAAACCCCTGAAAACGGGAACGGGTAGAGGCTTCATTA‑CCAACCGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg < 2:857856/289‑1 (MQ=255)
gCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGcgcg > 1:428637/1‑289 (MQ=255)
ttCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGt > 1:287260/1‑289 (MQ=255)
ccgccAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATg < 2:1343719/268‑1 (MQ=255)
aGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGCCGCTGGGGCGATGGTTACAGGAAGCACCAATCCCGCCCACTGCCGGAGTAGTGgcagc > 2:1518429/1‑289 (MQ=255)
aGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGGTAAGCGTGGCGGGCCATGTTAACGAGTCCGACTCCAGGCCCCCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGACGCACCAATGCCGCCGAAGGGCTCGGTACTGgcagc > 1:1721516/1‑289 (MQ=255)
aGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGGTACCGGAAGCACCAATGCCGCCGAATGGCGCGGGACTGGCAGCACCGGTAAGCg > 1:455140/1‑289 (MQ=255)
tGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGACGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt > 2:1889195/1‑288 (MQ=255)
tGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt < 2:628721/289‑1 (MQ=255)
tGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt > 1:725272/1‑288 (MQ=255)
tGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt > 1:509063/1‑288 (MQ=255)
aaaaCGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg > 1:169185/1‑256 (MQ=255)
aaaCGGTGACTGGTAGAGGATTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTACCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGAAGCACCGGTAAGCGGTTTGTTcc < 1:1366255/288‑1 (MQ=255)
aaCGGTGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc > 2:439538/1‑182 (MQ=255)
tGACGGGTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTGTGTTCCCGATaaa > 2:1313317/1‑288 (MQ=255)
gTAGAGGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATcc < 1:857377/288‑1 (MQ=255)
gagGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTGCTGGCAGCACCGGGAAGCGGTTGGTTCCCGTTAACACACcccg > 2:1250487/1‑288 (MQ=255)
agGCTTCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCcccgc > 1:1086627/1‑288 (MQ=255)
ttCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCcgcg < 2:955830/289‑1 (MQ=255)
ttCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAAGCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCcgcg < 2:178695/289‑1 (MQ=255)
tCATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCCGGGGCGATGGTTACCGGAAGCACCAATGCCCCCGAATGGCCCGGTACCTGCCTCACCGGTAAGCGGTTTTTTCCAGTTAACAATCCCCGCCcgcg > 2:1012763/1‑288 (MQ=255)
ccttA‑CCAAACGACGGGCCCGCGGAATGATGCGTCAGCCCGACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGcc < 2:1441336/287‑1 (MQ=255)
cATTA‑CCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCgcgc > 1:231161/1‑288 (MQ=255)
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GCGATCGTTGCCGCATTGGCTACCCACATTGGGCTAGCGGAACTGACGCTGGAAAGCCAGTGCGGTGCCTGGCGTGCAACTTTTTCCAGTACCTGCTCATCGCTACCACTGAATCCCAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGC‑GGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAAAATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCT > CP042583/1509908‑1510465
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A