Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,638,749 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,638,7490GC99.5% 509.2 / NA 216intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (97/118);  minor base A (0/1);  total (97/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,7500CG99.5% 501.4 / NA 216intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (97/118);  total (97/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,7510TA99.1% 510.4 / ‑6.7 216intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (97/117);  minor base G (0/2);  total (97/119)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 216 total aligned reads displayed.

GGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGA  >  CP042583/1638470‑1639029
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
ggCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAg                                                                                                                                                                                                                                                                                 >  2:494715/1‑289 (MQ=255)
   aTCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGaa                                                                                                                                                                                                                                                                              >  2:1919761/1‑289 (MQ=255)
      aaaaGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAg                                                                                                                                                                                                                                                                            >  2:606630/1‑288 (MQ=255)
        aaGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCa                                                                                                                                                                                                                                                                         <  1:1393143/289‑1 (MQ=255)
                             ttGGAGGGTCAGTGGCTGTTAATCTTTTCCATACATTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGtttt                                                                                                                                                                                                                                                    <  2:884299/289‑1 (MQ=255)
                                       aGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATTTAAGACt                                                                                                                                                                                                                                          >  2:1775641/1‑289 (MQ=255)
                                       aGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACt                                                                                                                                                                                                                                          >  2:803823/1‑289 (MQ=255)
                                               ttAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTgcg                                                                                                                                                                                                                                   >  1:1799203/1‑288 (MQ=255)
                                               ttAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTgcg                                                                                                                                                                                                                                   >  1:1331378/1‑288 (MQ=255)
                                                            tACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAAccc                                                                                                                                                                                                                      >  1:645176/1‑288 (MQ=255)
                                                             aCTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgc                                                                                                                                                                                                                    <  1:611734/289‑1 (MQ=255)
                                                               tGTTTCGGCCATTTCCTGGCGATTAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgccg                                                                                                                                                                                                                  <  2:2203524/289‑1 (MQ=255)
                                                                 tttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCcgccgc                                                                                                                                                                                                                 >  2:2065856/1‑288 (MQ=255)
                                                                 tttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCcgccgc                                                                                                                                                                                                                 >  1:1709878/1‑288 (MQ=255)
                                                                 tttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCgccgcc                                                                                                                                                                                                                >  1:1830712/1‑289 (MQ=255)
                                                                   tCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGcca                                                                                                                                                                                                               >  1:426011/1‑288 (MQ=255)
                                                                      gCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCCGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGccacca                                                                                                                                                                                                            >  1:1982430/1‑288 (MQ=255)
                                                                                      gAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAGAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCa                                                                                                                                                                                            >  1:2045475/1‑288 (MQ=255)
                                                                                          ttCGAACTTATCGTCACTTTCTATTTTGACGCTAACAAATGCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATCAATAAACCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  2:1959403/289‑1 (MQ=255)
                                                                                          ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  1:815772/289‑1 (MQ=255)
                                                                                          ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  2:1358331/289‑1 (MQ=255)
                                                                                          ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  2:1205706/289‑1 (MQ=255)
                                                                                          ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  1:2065856/289‑1 (MQ=255)
                                                                                                cTTTTCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAAt                                                                                                                                                                                 <  2:1133204/289‑1 (MQ=255)
                                                                                                   aTCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATaa                                                                                                                                                                               >  1:629483/1‑288 (MQ=255)
                                                                                                           tGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCg                                                                                                                                                                      >  1:1701643/1‑289 (MQ=255)
                                                                                                                         cTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCAGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCa                                                                                                                                                        >  1:848720/1‑289 (MQ=255)
                                                                                                                                         acatatCTTTAGATGACTTTAATTTAGCAAATAAATAATCGAGCCCTGACTTTGGAATATGGCAATCGGGACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCGGAGATTCCTCAAAAGGTTGACTCATCGAGTGGCAGGACAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCGCTACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                        <  2:2224902/287‑1 (MQ=255)
                                                                                                                                         aaaTATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                        <  2:645176/289‑1 (MQ=255)
                                                                                                                                         aaaTATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                        <  2:1830712/289‑1 (MQ=255)
                                                                                                                                                  tAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                               <  1:573445/289‑1 (MQ=255)
                                                                                                                                                   aGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCTGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTTAACTTAAATTACTgg                                                                                                                               >  2:255542/1‑288 (MQ=255)
                                                                                                                                                         cTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGa                                                                                                                        >  2:1472610/1‑289 (MQ=255)
                                                                                                                                                         cTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGa                                                                                                                        >  2:915516/1‑289 (MQ=255)
                                                                                                                                                          tttAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGtttttcc                                                                                                                                                               >  1:256436/1‑247 (MQ=255)
                                                                                                                                                            tAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAGCCGCTTTCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                     <  2:1331378/289‑1 (MQ=255)
                                                                                                                                                                  aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                               >  1:690622/1‑289 (MQ=255)
                                                                                                                                                                  aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                               >  2:1529400/1‑289 (MQ=255)
                                                                                                                                                                  aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                               >  2:1621451/1‑289 (MQ=255)
                                                                                                                                                                   gCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaattaaa                                                                                                                                      <  1:1768601/265‑1 (MQ=255)
                                                                                                                                                                              atccatccCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAAc                                                                                                                                                                              >  1:915173/1‑214 (MQ=255)
                                                                                                                                                                               tccatccCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCt                                                                                                                                                            <  1:1112443/231‑1 (MQ=255)
                                                                                                                                                                                 catccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACa                                                                                                <  1:1472610/280‑1 (MQ=255)
                                                                                                                                                                                  atccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                               <  1:587278/281‑1 (MQ=255)
                                                                                                                                                                                  atccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                               <  2:1508230/281‑1 (MQ=255)
                                                                                                                                                                                   tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAATCCAATGCGTTTTTTCCCTCGCATAGa                                                                                                                                                    >  2:1680496/8‑235 (MQ=255)
                                                                                                                                                                                   tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTcc                                                                                                                                                              <  1:2114414/218‑1 (MQ=255)
                                                                                                                                                                                   tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                 >  2:2091238/8‑286 (MQ=255)
                                                                                                                                                                                   tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAAc                                                                                              >  2:575505/8‑289 (MQ=255)
                                                                                                                                                                                    ccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACa                                                                                                <  1:1735446/280‑1 (MQ=255)
                                                                                                                                                                                         actTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                               >  2:197228/2‑282 (MQ=255)
                                                                                                                                                                                             tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                               >  2:1841103/1‑278 (MQ=255)
                                                                                                                                                                                             tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAAcc                                                                                     >  2:203123/1‑288 (MQ=255)
                                                                                                                                                                                             tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCg                                                                                    <  1:576329/289‑1 (MQ=255)
                                                                                                                                                                                              ggAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                   <  2:900973/289‑1 (MQ=255)
                                                                                                                                                                                                   atGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCa                                                                              <  2:856956/289‑1 (MQ=255)
                                                                                                                                                                                                   atGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCa                                                                              <  2:278931/289‑1 (MQ=255)
                                                                                                                                                                                                     ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                       <  1:1149002/182‑1 (MQ=255)
                                                                                                                                                                                                     ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                               >  1:350430/1‑270 (MQ=255)
                                                                                                                                                                                                     ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATa                                                                            >  2:2058422/1‑289 (MQ=255)
                                                                                                                                                                                                        aattggaccaTTCCTAACGTATCCCTTTCTGGTTCGAAAAGTGGGCAGGTACCTGATATTCCTCAAGATGTTTACTCATCGAGAGGCAGGAAATGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTTCTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  2:2018855/281‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCCCATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCCTCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  1:1493140/289‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  2:1709878/289‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  1:2170452/289‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  1:863518/289‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         <  2:690622/289‑1 (MQ=255)
                                                                                                                                                                                                        aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACACTTCCCTGATATTCCTCACAAGGTTTACGCCGCGAGTGGCAGGAAAGGCAAAATTCTGTCTCCGACGTTTTATGTCCACCTTTTTGCGCCCACAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCG‑TTTTTCCCTCGCATCTATTCCTCTAATTAAATTACTGGACACCTAAATCATTGTATAATTCCCTCTCCCCCCCATTAACCGCTTGCATAAtt                                                                         <  1:1045574/288‑1 (MQ=255)
                                                                                                                                                                                                              cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                    <  1:78530/288‑1 (MQ=255)
                                                                                                                                                                                                              cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                    <  2:378390/288‑1 (MQ=255)
                                                                                                                                                                                                              cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                    <  2:638823/288‑1 (MQ=255)
                                                                                                                                                                                                              cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                    <  2:658011/288‑1 (MQ=255)
                                                                                                                                                                                                                  ttCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                               <  1:1621451/289‑1 (MQ=255)
                                                                                                                                                                                                                  taccGCCCGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTAATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                               <  2:2136883/287‑1 (MQ=255)
                                                                                                                                                                                                                        aCGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCt                                                         >  2:1312601/1‑289 (MQ=255)
                                                                                                                                                                                                                           tATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGaa                                                      >  1:76802/1‑289 (MQ=255)
                                                                                                                                                                                                                            aTCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTaa                                                                                                       <  1:1960119/239‑1 (MQ=255)
                                                                                                                                                                                                                             tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                     <  2:1817256/224‑1 (MQ=255)
                                                                                                                                                                                                                             tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                              >  1:1524054/1‑231 (MQ=255)
                                                                                                                                                                                                                             tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                 <  2:1090231/244‑1 (MQ=255)
                                                                                                                                                                                                                             tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                 >  1:1090231/1‑244 (MQ=255)
                                                                                                                                                                                                                                cTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAAt                                                 <  2:76802/289‑1 (MQ=255)
                                                                                                                                                                                                                                  ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                   >  2:1759647/1‑253 (MQ=255)
                                                                                                                                                                                                                                  ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                         >  2:1551637/1‑263 (MQ=255)
                                                                                                                                                                                                                                             aaaGTGGATAGTTCCCTGCTATTTCTCAAATGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATTCGACGTTTTATGTAAGACTTCTTGCGCCAGCAATAACCCGCCGCCACCAACCACATCCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACCCTGCCTGAAACAATCGATAAAGAata                                     <  2:217476/288‑1 (MQ=255)
                                                                                                                                                                                                                                             aaaGTGGACAATTGCCTGATGTTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                     <  2:835804/288‑1 (MQ=255)
                                                                                                                                                                                                                                              aaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATg                                   <  2:1339429/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aCAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATtta                              <  1:986017/288‑1 (MQ=255)
                                                                                                                                                                                                                                                         tCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATttat                             <  1:1312601/284‑1 (MQ=255)
                                                                                                                                                                                                                                                         tCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATttat                             <  1:203123/284‑1 (MQ=255)
                                                                                                                                                                                                                                                         tCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTACTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACa                         <  1:2216579/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          cccTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCg                                               >  1:1662738/1‑265 (MQ=255)
                                                                                                                                                                                                                                                                  ttCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAAtt                                                                                                         >  1:1956678/1‑199 (MQ=255)
                                                                                                                                                                                                                                                                  ttCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAt               >  1:898266/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAAc                                                    <  2:1893367/250‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAAc                                                    >  1:1893367/1‑250 (MQ=255)
                                                                                                                                                                                                                                                                    ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATa                                            <  1:1858474/258‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATa                                            >  2:1858474/1‑258 (MQ=255)
                                                                                                                                                                                                                                                                    ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                     >  2:510571/1‑265 (MQ=255)
                                                                                                                                                                                                                                                                           aGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTa      <  1:926213/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTa      <  1:1571392/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
GGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGA  >  CP042583/1638470‑1639029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A