Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,638,749 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,638,7490GC98.7% 540.8 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (103/127);  total (103/131)
Fisher's exact test for biased strand distribution p-value = 2.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,7500CG99.6% 540.6 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (103/129);  minor base A (0/1);  total (103/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,7510TA99.6% 547.3 / NA 234intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (103/130);  minor base G (0/1);  total (103/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 234 total aligned reads displayed.

ATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAG  >  CP042583/1638473‑1639027
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
aTCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGaa                                                                                                                                                                                                                                                                            <  1:303435/289‑1 (MQ=255)
  cAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAg                                                                                                                                                                                                                                                                          >  1:366449/1‑289 (MQ=255)
         aTGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCaaa                                                                                                                                                                                                                                                                     <  1:217591/287‑1 (MQ=255)
                      cACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATccgacg                                                                                                                                                                                                                                                      >  2:1445532/1‑284 (MQ=255)
                        cGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATccgacgtt                                                                                                                                                                                                                                                    <  2:1544979/289‑8 (MQ=255)
                                    aGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACt                                                                                                                                                                                                                                        >  2:697295/1‑289 (MQ=255)
                                    aGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACt                                                                                                                                                                                                                                        >  1:927582/1‑289 (MQ=255)
                                     gTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACtt                                                                                                                                                                                                                                       >  2:1899054/1‑289 (MQ=255)
                                     gTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACtt                                                                                                                                                                                                                                       >  2:1601972/1‑289 (MQ=255)
                                       ggCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACtttt                                                                                                                                                                                                                                     >  2:554499/1‑289 (MQ=255)
                                            ttAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTgcg                                                                                                                                                                                                                                 >  1:373723/1‑288 (MQ=255)
                                            ttAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTgcg                                                                                                                                                                                                                                 >  1:1794154/1‑288 (MQ=255)
                                                  cTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCaa                                                                                                                                                                                                                          >  1:1225831/1‑289 (MQ=255)
                                                      ccctACTGTTTCGTCCATTTCCAGGCGATGTGCTTCGAACTTATCGTCCCTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAAc                                                                                                                                                                                                                      <  2:754082/286‑1 (MQ=255)
                                                          acggTTTCGGCCATTTCCTGGCGTTGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATACATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgc                                                                                                                                                                                                                  <  2:1962925/286‑1 (MQ=255)
                                                             gTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAAc                                                                                                                                                                                                                      >  1:1579554/1‑282 (MQ=255)
                                                             gTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgccg                                                                                                                                                                                                                >  1:454250/1‑288 (MQ=255)
                                                              tttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCcgccgc                                                                                                                                                                                                               >  2:1198433/1‑288 (MQ=255)
                                                               ttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGcca                                                                                                                                                                                                             <  2:18479/289‑1 (MQ=255)
                                                                tCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGccac                                                                                                                                                                                                            <  1:1086024/289‑1 (MQ=255)
                                                                tCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGccac                                                                                                                                                                                                            <  1:1310979/289‑1 (MQ=255)
                                                                   gCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGATTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGATGTTTTGTGCTAGTAATAACCCGACGccacca                                                                                                                                                                                                          >  2:1577248/1‑288 (MQ=255)
                                                                                   gAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCa                                                                                                                                                                                          >  1:1197643/1‑288 (MQ=255)
                                                                                       ttCTAACTTTTGGTCACTGTCTATTTTTCCGCTAACAAATTCATGATAAATATGTTTTGATGCCTTTAATTTAGCAAATACATACTCCCGCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                     <  2:1537656/289‑1 (MQ=255)
                                                                                       ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                     <  2:1262797/289‑1 (MQ=255)
                                                                                                      aCTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACa                                                                                                                                                                                 >  2:395158/1‑278 (MQ=255)
                                                                                                        tGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATccg                                                                                                                                                                                                                                                         <  1:539971/204‑3 (MQ=255)
                                                                                                        tGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATccg                                                                                                                                                                                                                                                         >  2:539971/1‑202 (MQ=255)
                                                                                                                    cGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAACACAATAACCCAACGCGTTTTTTCCCta                                                                                                                                                         >  2:860639/1‑287 (MQ=255)
                                                                                                                    cGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAACCAATAACCCAATGCGTTTTTTCCCTc                                                                                                                                                         >  1:1142820/1‑288 (MQ=255)
                                                                                                                    cGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTc                                                                                                                                                         >  1:411431/1‑288 (MQ=255)
                                                                                                                    cGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCCGACACAGCAACACCAAAAACCCAACTCGTTCTTTcccac                                                                                                                                                         >  2:296907/1‑286 (MQ=255)
                                                                                                                          cAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGa                                                                                                                                                  <  1:1747224/289‑1 (MQ=255)
                                                                                                                               tCATGATAAATATCTATAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCct                                                                                                                                             <  1:272987/289‑1 (MQ=255)
                                                                                                                                 aTGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCctct                                                                                                                                           <  2:1141557/289‑1 (MQ=255)
                                                                                                                                   gATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaa                                                                                                                                         <  1:75558/289‑1 (MQ=255)
                                                                                                                                   gATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaa                                                                                                                                         <  1:1459192/289‑1 (MQ=255)
                                                                                                                                               tAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAATTGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                             >  1:1687354/1‑289 (MQ=255)
                                                                                                                                               tAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                             >  2:1582971/1‑289 (MQ=255)
                                                                                                                                               tAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                             <  1:69105/289‑1 (MQ=255)
                                                                                                                                                  aTGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGac                                                                                                                           >  1:973527/1‑288 (MQ=255)
                                                                                                                                                   tGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGacac                                                                                                                         <  2:1777175/289‑1 (MQ=255)
                                                                                                                                                   tGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGac                                                                                                                           <  1:1899054/287‑1 (MQ=255)
                                                                                                                                                       tttAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCCCCAACCACAACCGCCATCAGCAAAAACAATAACCCAATCCGTTTTTTCCCTCGCATAGTATCCTATACTTAAATTACTTGACACCGaa                                                                                                                     >  2:1231014/1‑289 (MQ=255)
                                                                                                                                                       tttAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCAAATTAAATTACTGGACACCGaa                                                                                                                     >  2:1651237/1‑289 (MQ=255)
                                                                                                                                                         tAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGaaa                                                                                                                    >  2:1407359/1‑288 (MQ=255)
                                                                                                                                                           aTTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCa                                                                                                                 <  2:1466391/289‑1 (MQ=255)
                                                                                                                                                               aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                             >  2:17472/1‑289 (MQ=255)
                                                                                                                                                                gCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                   >  2:909223/1‑282 (MQ=255)
                                                                                                                                                                  aaataaatAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGtata                                                                                                          <  1:837852/289‑1 (MQ=255)
                                                                                                                                                                  aaataaatAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGtata                                                                                                          <  2:199785/289‑1 (MQ=255)
                                                                                                                                                                  aaataaatAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                            <  2:379113/287‑1 (MQ=255)
                                                                                                                                                                  aaataaatAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                            <  1:156180/287‑1 (MQ=255)
                                                                                                                                                                     taaataaTCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAAtt                                                                                                       <  1:1231014/289‑1 (MQ=255)
                                                                                                                                                                                tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTcc                                                                                                                                                            >  2:1090666/8‑225 (MQ=255)
                                                                                                                                                                                tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTcc                                                                                                                                                            <  1:1090666/218‑1 (MQ=255)
                                                                                                                                                                                tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                   >  1:1368130/8‑266 (MQ=255)
                                                                                                                                                                                 ccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACg                                                                                           >  1:1878237/7‑289 (MQ=255)
                                                                                                                                                                                          tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCa                                                                                                                                                                                       <  1:1041265/188‑1 (MQ=255)
                                                                                                                                                                                          tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAAcc                                                                                   >  2:370875/1‑288 (MQ=255)
                                                                                                                                                                                          tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGAAACCGAAAACATTGTAAAATTAAATATACAACGAAATAccc                                                                                   >  2:1681020/1‑288 (MQ=255)
                                                                                                                                                                                          tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTCATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGAATCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAAca                                                                                   >  1:1733342/1‑287 (MQ=255)
                                                                                                                                                                                           ggAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                 <  2:335124/289‑1 (MQ=255)
                                                                                                                                                                                                 tGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCAt                                                                           >  1:390660/1‑289 (MQ=255)
                                                                                                                                                                                                  ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGATAGGCAAAATGCTGTATCCGACGTTGTATGTAAGACTGTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATa                                                                          >  1:10573/1‑289 (MQ=255)
                                                                                                                                                                                                  ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGtttttt                                                                                                                                                              <  2:420449/205‑1 (MQ=255)
                                                                                                                                                                                                     aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                       <  1:1840393/289‑1 (MQ=255)
                                                                                                                                                                                                     aaTCGGCACATTCCGCACCTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                       <  1:1679056/289‑1 (MQ=255)
                                                                                                                                                                                                       tCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATaa                                                                         >  1:1587921/1‑285 (MQ=255)
                                                                                                                                                                                                       tCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAg                                                                     >  2:834463/1‑289 (MQ=255)
                                                                                                                                                                                                               ttccgaccttATCCCTTTATGGGTCGAAAGGTGGAAGGTTCCCTGATATTCCTCAAAAGGTTTACT‑AATGGAGTGGCAGGATAGGCAAACTGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAAACGCTATCAGCAAAAACACTACCCCAATGCGTGTTTTCCCTAGCATAGATTACTCTAATTAAATTACTTGACACCGACATCATTGTCTAATTAAATATACAACGAATTAACCGCTTGCCTAATTAGGCacaaca                                                             <  2:10573/280‑1 (MQ=255)
                                                                                                                                                                                                               ttCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCTAAATCATTGTATAATTAAATATACAACGAATTAACCGATTGCATAATTAGGCaaaaac                                                             >  2:575120/1‑287 (MQ=255)
                                                                                                                                                                                                               ttCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                             <  2:1818391/289‑1 (MQ=255)
                                                                                                                                                                                                               ttCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                             <  2:1878237/289‑1 (MQ=255)
                                                                                                                                                                                                               ttCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                             <  1:875232/289‑1 (MQ=255)
                                                                                                                                                                                                                  cGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTAACAGCAAAAACAATAACCCAATGCGTTTTTTCCCCCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATAAACCACTAGCAAAATTAGGCACAACACt                                                           >  2:1719803/1‑288 (MQ=255)
                                                                                                                                                                                                                    cACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTATTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGc                                                         >  2:133034/1‑288 (MQ=255)
                                                                                                                                                                                                                     aCGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAgg                                                                    >  2:936198/1‑276 (MQ=255)
                                                                                                                                                                                                                          tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCa                                                                                                                 <  2:779574/226‑1 (MQ=255)
                                                                                                                                                                                                                          tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCa                                                                                                                 >  1:779574/1‑226 (MQ=255)
                                                                                                                                                                                                                          tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAAc                                                  <  2:348423/289‑1 (MQ=255)
                                                                                                                                                                                                                          tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTCGCATAATTAGGCACAACACTGCCTGAAAc                                                  <  1:1407359/289‑1 (MQ=255)
                                                                                                                                                                                                                               ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAAc                                                                                    <  1:1611054/250‑1 (MQ=255)
                                                                                                                                                                                                                               ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTg                                                                              <  2:1661111/256‑1 (MQ=255)
                                                                                                                                                                                                                               ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTg                                                                              >  1:1661111/1‑256 (MQ=255)
                                                                                                                                                                                                                                     ttcgaaaaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATaaa                                        <  1:1721430/283‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                   <  2:454250/288‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                   <  1:335461/288‑1 (MQ=255)
                                                                                                                                                                                                                                             gTGGACAGTTCACACTGATTCCTCAAAAGTTTTAATAGATG‑ACTGGCAGGAACGGGAAAATGCTGTATAAGACCTTATATGTAAGACTGTTTGCGCCAGCAATAACCCGCCGCCAACAATCACACACGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAAAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGATACAAGCGATAAAGAATCTg                                 <  2:1070821/287‑1 (MQ=255)
                                                                                                                                                                                                                                                               ttCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACTCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAt             >  1:700489/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               ttCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGtata                                                                                                          >  2:1002521/1‑196 (MQ=255)
                                                                                                                                                                                                                                                               ttCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGtata                                                                                                          <  1:1002521/196‑1 (MQ=255)
                                                                                                                                                                                                                                                               ttCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAt             >  2:117819/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                tCCTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAtt            <  1:575120/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ccTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATg                                                                                                                                                                      >  2:11565/1‑134 (MQ=255)
                                                                                                                                                                                                                                                                 ccTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTa           >  2:730126/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  cTCAAAAGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTaa          >  1:552871/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aaGGTTTACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                   >  1:148285/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                            ttACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                             <  1:668254/164‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttACT‑CATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                             >  2:668254/1‑164 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
ATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACT‑CATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAG  >  CP042583/1638473‑1639027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A