Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,478,414 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,478,4140GC99.2% 890.3 / NA 378intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (182/192);  total (182/196)
Fisher's exact test for biased strand distribution p-value = 2.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,478,4150CG99.5% 890.7 / NA 378intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (181/193);  total (182/196)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,478,4160TA98.9% 895.6 / NA 378intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (182/192);  minor base G (0/4);  total (182/196)
Fisher's exact test for biased strand distribution p-value = 1.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 378 total aligned reads displayed.

GACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGCAC  >  CP042583/1478134‑1478688
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                
gACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTc                                                                                                                                                                                                                                                                            >  1:1623781/1‑289 (MQ=255)
     aTGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCt                                                                                                                                                                                                                                                                        >  1:2914391/1‑288 (MQ=255)
      tGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTc                                                                                                                                                                                                                                                                      >  1:1808117/1‑289 (MQ=255)
       gCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCa                                                                                                                                                                                                                                                                     <  1:843057/289‑1 (MQ=255)
           acaggTGCCTGAGGATCTGGTACGAAAGCCAGACCGCTTTCGAAAATGCGCCCACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGt                                                                                                                                                                                                                                                                 <  2:168987/286‑1 (MQ=255)
                          tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTTTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGACCCCATAACCa                                                                                                                                                                                                                                                  >  2:1583423/1‑289 (MQ=255)
                          tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCa                                                                                                                                                                                                                                                  >  1:275262/1‑289 (MQ=255)
                          tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCa                                                                                                                                                                                                                                                  >  1:1705327/1‑289 (MQ=255)
                          tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCa                                                                                                                                                                                                                                                  >  1:1047667/1‑289 (MQ=255)
                            tGGTACGAAACGACGACCCCGTCCGAAAATGCGTACACGGTTCGGCGGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                <  2:1546110/289‑1 (MQ=255)
                             gtgaggAACCGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGCTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTGCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGc                                                                                                                                                                                                                                               <  2:3062829/284‑1 (MQ=255)
                                aCGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCtt                                                                                                                                                                                                                                             >  1:946903/1‑288 (MQ=255)
                                            ccGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCgg                                                                                                                                                                                                                                  <  2:1047667/287‑1 (MQ=255)
                                            ccGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCt                                                                                                                                                                                                                                <  2:2342392/289‑1 (MQ=255)
                                            ccGCTGTCGAAAGTGCGCACTCGGGTCTGCTGACGGTTCTGGTTGTACACCAAGGTTGCCAGGAGGCCAGTCCACAGGGAAAGACGGATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGc                                                                                                                                                                                                                                 <  2:3200080/288‑1 (MQ=255)
                                              gCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCCGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                >  2:2046527/1‑271 (MQ=255)
                                              gCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                <  1:2046527/271‑1 (MQ=255)
                                                  tCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCg                                                                                                                                                                                                                          >  1:618794/1‑289 (MQ=255)
                                                         tGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCTAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGc                                                                                                                                                                                                                                           <  2:1015931/265‑1 (MQ=255)
                                                         tGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCTAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGc                                                                                                                                                                                                                                           >  1:1015931/1‑265 (MQ=255)
                                                              acacGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                                                                                                                                                              <  1:1995347/289‑1 (MQ=255)
                                                                   gTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAg                                                                                                                                                                                                                                                              >  1:589165/1‑236 (MQ=255)
                                                                      ctggtaaCGGTTCTGATTTAACACCACGGTTGACAGCAGGCCAATCCACAGCGAAAGGCGAATTGCTGACATGTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCAGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGGGCAGCGTTTTCACGCGCTTGGGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTaa                                                                                                                                                                                                      <  2:2002543/283‑1 (MQ=255)
                                                                            aCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgc                                                                                                                                                                                                >  1:321455/1‑289 (MQ=255)
                                                                              ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTg                                                                                                                                                                                                                                                                >  2:1811377/1‑223 (MQ=255)
                                                                              ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTAcc                                                                                                                                                                                                                                                          >  1:1260943/1‑229 (MQ=255)
                                                                              ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCgg                                                                                                                                                                                                                         >  2:1387287/1‑262 (MQ=255)
                                                                              ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgcgc                                                                                                                                                                                              >  1:1359524/1‑289 (MQ=255)
                                                                                          acagCACGGTTGCGAGCAGGCCAGTCGACAGAGAAGGAAGCAGTGCAGACATTTCAACAGAGATCGGGCTTGGAAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAc                                                                                                                                                                                  <  2:3107551/289‑1 (MQ=255)
                                                                                               acGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGa                                                                                                                                                                              >  2:955854/1‑288 (MQ=255)
                                                                                                cGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGa                                                                                                                                                                              >  1:3232320/1‑287 (MQ=255)
                                                                                                   ttGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGAtct                                                                                                                                                                           >  1:2201654/1‑287 (MQ=255)
                                                                                                             gCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTAccc                                                                                                                                                                                                                                                         <  2:2249255/199‑1 (MQ=255)
                                                                                                                    cacaGGAAAAGACGCATGGCTGACATTTCACCAGTGATCGTGCGTTGCAGCAGGAAGGCTTCAACGCCTGGATGGAGCATCTGCTGAACTTTCGGATCAACGAAGCTGTAGGTGATCGCTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGGCAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGTCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGa                                                                                                                                                        <  2:1747407/289‑1 (MQ=255)
                                                                                                                       agagAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCACCCAGATCTCCTTCAATCTACATATCGaaa                                                                                                                                                      >  2:2952928/1‑288 (MQ=255)
                                                                                                                       agagAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAAc                                                                                                                                                     >  1:110719/1‑289 (MQ=255)
                                                                                                                            aaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTGAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGa                                                                                                                                                                                                                       <  2:355847/218‑1 (MQ=255)
                                                                                                                            aaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCa                                                                                                                                                 >  2:3286049/1‑288 (MQ=255)
                                                                                                                                cGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                                                                                                                                                              <  1:2157604/223‑1 (MQ=255)
                                                                                                                                   attgctgacATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                <  2:56826/178‑1 (MQ=255)
                                                                                                                                   attgctgacATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                <  1:761566/178‑1 (MQ=255)
                                                                                                                                      gctgacATTTCAACAGAGATCGGGCTTGGCAGCATTAATGCTTCAACGCCTTGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGTTCACTTCCTTATAGCCTTTTTCTTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTTCCTGTACCGGCTCATCCTTGATGTTGTTGTCGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCTTATCGAAACGCCAGCTCGGCGCaa                                                                                                                                      <  1:2590745/284‑1 (MQ=255)
                                                                                                                                               tCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                                                                                                                                                              >  2:597283/1‑208 (MQ=255)
                                                                                                                                                      agaTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCg                                                                                                                        >  1:1878899/1‑287 (MQ=255)
                                                                                                                                                        atgggggTTGGCAGTAGTAAGGATACAACGCCTGGATGGATCATGTGCGGCACTTTCGGATCAACGTAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGATTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCt                                                                                                                     <  2:693238/285‑1 (MQ=255)
                                                                                                                                                        aTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCtt                                                                                                                    >  2:1460893/1‑289 (MQ=255)
                                                                                                                                                                 ggCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAg                                                                                                                                                                                                                                                              >  1:2827471/1‑142 (MQ=255)
                                                                                                                                                                  gcagcaGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCgg                                                                                                           >  1:685770/1‑288 (MQ=255)
                                                                                                                                                                  gcagcaGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCgg                                                                                                           >  1:2303933/1‑288 (MQ=255)
                                                                                                                                                                           aGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtct                                                                                                                                                                                       <  1:2255671/203‑1 (MQ=255)
                                                                                                                                                                                tCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                                                                                                                                                                <  1:1581771/141‑1 (MQ=255)
                                                                                                                                                                                 cAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACg                                                                                                                                                                                                                                                                   <  1:56155/121‑1 (MQ=255)
                                                                                                                                                                                       cTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGAt                                                                                                                                                                             <  1:1764407/201‑1 (MQ=255)
                                                                                                                                                                                            tggctCATCTGCTTCACTTGCAGATCAACGACGCTGTAGGTGATCACTTCCTGAGTGCCTTGGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGaa                                                                                <  2:3242436/289‑1 (MQ=255)
                                                                                                                                                                                               atcatcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc                                                                                                                                                                                 <  1:2554651/189‑1 (MQ=255)
                                                                                                                                                                                               atcatcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATg                                                                              >  2:1078823/1‑288 (MQ=255)
                                                                                                                                                                                                 catcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAAt                                                                                                                                                                                                                                                    <  2:2932116/120‑1 (MQ=255)
                                                                                                                                                                                                    ctgctgCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGtt                                                                        >  1:2945835/1‑289 (MQ=255)
                                                                                                                                                                                                       ctgcACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTa                                                                       >  1:385083/1‑287 (MQ=255)
                                                                                                                                                                                                        tgcACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTAc                                                                      >  2:523509/1‑287 (MQ=255)
                                                                                                                                                                                                         gcACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTg                                                                   <  1:2096403/289‑1 (MQ=255)
                                                                                                                                                                                                           aCTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGc                                                                  <  1:1293639/288‑1 (MQ=255)
                                                                                                                                                                                                            cTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTc                                                                <  1:523509/289‑1 (MQ=255)
                                                                                                                                                                                                              ttCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCAt                                                              <  2:2530766/289‑1 (MQ=255)
                                                                                                                                                                                                               tCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATc                                                             <  1:1469530/289‑1 (MQ=255)
                                                                                                                                                                                                                   aTCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGc                                                          <  1:2213444/288‑1 (MQ=255)
                                                                                                                                                                                                                    tgaaaggaGCTGTAGGTGATCACTTCCTGATAGCCTTTGGCGTTGAGCAGCGTTGTCACGCGCTTGAGCGACAGGTCAGCTGCACGGTGAGTACCCAAAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCTACCAGATCTTCTTCAATCTCCATATCGATACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCGGAATGTCAGTTACCTGCTCATCCGCa                                                         <  2:1263457/281‑1 (MQ=255)
                                                                                                                                                                                                                       aCGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTc                                                                >  1:1204575/1‑278 (MQ=255)
                                                                                                                                                                                                                       aCGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTc                                                                <  2:1204575/278‑1 (MQ=255)
                                                                                                                                                                                                                                tAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGa                                            >  1:2244034/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ggTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGa                                                                                                                                                        <  2:2856548/179‑1 (MQ=255)
                                                                                                                                                                                                                                   ttgatactttCCTGTTAGCCTTTGTCGTGTAGCAGCTGTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATCTCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATc                                          <  2:2202613/280‑1 (MQ=255)
                                                                                                                                                                                                                                     gagcACTTCCGGATGGCCTTTGTCGTTTGGCAGCGTTTTCACGCGCTTGAGCGACAGGTCGGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAgg                                       <  2:2636392/286‑1 (MQ=255)
                                                                                                                                                                                                                                      aTCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTc                                                                                                    <  1:819195/227‑1 (MQ=255)
                                                                                                                                                                                                                                       tCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGa                                                                                                                                                                                            >  2:2242702/1‑138 (MQ=255)
                                                                                                                                                                                                                                       tCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTcc                                                                                                                                                               <  2:925694/167‑1 (MQ=255)
                                                                                                                                                                                                                                       tCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCCGAATGTCAGTTACCTGCTCATCCGCATTATGATGGCCGATCAGGCg                                     >  1:1537272/1‑289 (MQ=255)
                                                                                                                                                                                                                                       tCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCg                                     >  1:2487097/1‑289 (MQ=255)
                                                                                                                                                                                                                                        cACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGgcgc                                                                                                                                        >  2:2285533/1‑189 (MQ=255)
                                                                                                                                                                                                                                          cTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCgag                                                                                           >  2:2077557/1‑232 (MQ=255)
                                                                                                                                                                                                                                            tCCTTATAGCCTTTGTCGTTGCGCAGCGTTTTCACGCGCTTGGGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCa                                <  2:46190/289‑1 (MQ=255)
                                                                                                                                                                                                                                             ccTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAActgcc                                                                                                                                 >  1:3112700/1‑191 (MQ=255)
                                                                                                                                                                                                                                             ccTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCCCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCCGAATGTCTGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGAcccgg                               >  2:2377784/1‑287 (MQ=255)
                                                                                                                                                                                                                                              cTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGt                              >  1:2636392/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   atgctgtGTCGTGGAGACGCGGTTTCACGCGGTTGAGCGACAGGTCCGCTTCACGGTGTGTACCGATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCt                         <  2:2594092/283‑1 (MQ=255)
                                                                                                                                                                                                                                                   aGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCt                         <  1:3074127/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    gCCTTTGTCATTTGGCAGAGTTTTGTCGGGCTTGAGAGACAGGTCCGCTTCACGGTTGGTGACCATAATCAGACTGGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTGGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCt                         <  2:2488386/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                                                                                                                                                              >  1:3314632/1‑106 (MQ=255)
                                                                                                                                                                                                                                                     ccTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtg                                                                                                                                                                                                                     <  2:2781518/99‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAActgcc                                                                                                                                 >  2:789681/1‑183 (MQ=255)
                                                                                                                                                                                                                                                     ccTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCCCATCCGCAACATGATGGCCGAACAGGCGATCCAGTTTGCTac                       >  2:752139/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      cTTTGTCGTTGGGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTacg                      <  1:2528399/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         tGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTacgacg                   >  1:1428003/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATc                                                             >  1:2357559/1‑243 (MQ=255)
                                                                                                                                                                                                                                                               tGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGAtcttct                                                                                                                                                                        <  2:2181930/134‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGt                                                                                                          >  1:3254074/1‑196 (MQ=255)
                                                                                                                                                                                                                                                                  gaggcGTTTTAACGGGCTTGAGCGACAGGTCAGCTTAACGGGGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGa           <  2:1905782/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCCGATCTTCTTCAATCTCCATATCGAAACGCCATCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTg     <  1:695779/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ttttCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGc    >  1:971942/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                cgcTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATc                                  >  1:2991223/1‑251 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                
GACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGCAC  >  CP042583/1478134‑1478688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A