Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,478,414 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,478,414 | 0 | G | C | 99.3%
| 678.5
/ NA
| 289 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (142/145); total (143/146) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,478,415 | 0 | C | G | 99.7%
| 674.3
/ NA
| 288 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (142/144); total (142/146) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,478,416 | 0 | T | A | 99.0%
| 673.0
/ NA
| 288 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (142/141); minor base C (0/3); total (142/146) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 289 total aligned reads displayed.
ATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGCACGCTTCG > CP042583/1478129‑1478694
|||
gCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTc > 2:235954/1‑288 (MQ=255)
gCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCa < 1:241472/289‑1 (MQ=255)
ccAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑Cg < 1:1665461/289‑1 (MQ=255)
aaCGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGt < 2:402785/289‑1 (MQ=255)
ggTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAg < 1:40533/289‑1 (MQ=255)
ccTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTAc > 1:1203750/1‑288 (MQ=255)
ccTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTAc > 1:794533/1‑288 (MQ=255)
cTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGt > 2:615794/1‑281 (MQ=255)
cTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGt < 1:615794/281‑1 (MQ=255)
gAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCAt > 1:514269/1‑289 (MQ=255)
aTCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATaa < 1:1392156/287‑1 (MQ=255)
aTCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAAt < 1:315409/288‑1 (MQ=255)
tGGTACGAACAGCCGACCGCTTTCGAAAATGGGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGGCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAgg < 2:1775457/289‑1 (MQ=255)
ggTACGAAACGCAGACCTCGTTCGAGAATGCGCACACGGTTCTGCTGCCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAgg < 2:138422/288‑1 (MQ=255)
aCGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTg < 1:976244/289‑1 (MQ=255)
gAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTAcc > 1:698069/1‑273 (MQ=255)
gAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTAcc < 2:698069/273‑1 (MQ=255)
accgatcGCTTTCGTAAATGGGCACCCGTTTGTACTGGCCGTTCTGGTTGTACACCTCGTTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTAc < 2:870450/283‑1 (MQ=255)
tttCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATc < 2:794533/289‑1 (MQ=255)
aaaTGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGGAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAt < 2:1457608/289‑1 (MQ=255)
gcacGGTTCGGATGACGGTACTGGTAGTATACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGAAGTAAGGCTTCAACGCCTGTATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttg < 1:346649/287‑1 (MQ=255)
agccGGTTCTGCTGACGTTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGAATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttg < 2:682050/285‑1 (MQ=255)
acacGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttg < 1:1246134/288‑1 (MQ=255)
aaccGGTTCTGCTGACGGTTATGGTTGTAAACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt < 2:1841940/286‑1 (MQ=255)
aCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgc > 1:204785/1‑289 (MQ=255)
ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTCCCGGCTCATCCGGGATGTTTGTGTAGCCGTAAACAcgcg > 2:731174/1‑288 (MQ=255)
ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAg > 2:155379/1‑275 (MQ=255)
ttGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtct < 1:858741/288‑1 (MQ=255)
acacCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGGACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGGTGTCGCCGTAAACACGCTCGACTGCTTCac > 2:1128709/1‑287 (MQ=255)
caccccGGTTGCCAGGAGGCCAGGCCCAAGGTAAAGACGCATTGCTGACATTTCCACAGAGTTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc < 2:3240/289‑1 (MQ=255)
acGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc < 1:465646/285‑1 (MQ=255)
cGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGa > 1:1631404/1‑287 (MQ=255)
tCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGGTAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATc > 1:573478/1‑289 (MQ=255)
tCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCatat > 2:758226/1‑288 (MQ=255)
cacaGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGa < 1:768468/289‑1 (MQ=255)
agagAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAAc > 1:457113/1‑289 (MQ=255)
aaaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCa > 1:1872400/1‑289 (MQ=255)
aaGACGCAGTGCTGACATGTCAACAGAGATCTGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGATGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAg < 1:1752285/289‑1 (MQ=255)
attgctgacATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCgcc > 2:1035311/9‑286 (MQ=255)
tgctgacATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCa > 1:1086448/7‑289 (MQ=255)
acATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAActg > 1:1810035/2‑288 (MQ=255)
tCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACtgcctgcc > 1:1739436/1‑289 (MQ=255)
aaCAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACtgcctgccct > 1:1707375/1‑287 (MQ=255)
aTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCACCCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCTGCCCAACTGCCTGCCATTCCTCtt > 2:1054336/1‑289 (MQ=255)
aTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATTGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGCCtt > 1:1211610/1‑289 (MQ=255)
aTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCtt > 1:1341855/1‑289 (MQ=255)
aTCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTAAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCCCGACTTCTTCAACCAGATCTTCTTCAATCTCCCTATCGAAACGCAAGCCCCGCCCACATTCCTGCCATCCGTCtt > 2:508422/1‑289 (MQ=255)
gggCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTg > 1:736052/1‑288 (MQ=255)
tGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTGCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCg > 2:175490/1‑289 (MQ=255)
tGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCg > 1:251736/1‑289 (MQ=255)
gcagcaGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCgg > 1:810521/1‑288 (MQ=255)
gcagcaGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCgg > 1:1182642/1‑288 (MQ=255)
cagcggTAAGGCTTCAACGCCTGGTTGGATCACCTGTTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGt < 2:942564/288‑1 (MQ=255)
aaGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACtt < 1:1525250/286‑1 (MQ=255)
aaGGCGTCAACGCCGGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCg < 2:278246/288‑1 (MQ=255)
ggCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCa > 1:538919/1‑288 (MQ=255)
tCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCga > 1:17287/1‑289 (MQ=255)
cAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAgg < 1:1770988/140‑1 (MQ=255)
aaCGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCgaga < 1:114075/289‑1 (MQ=255)
atcatcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATg > 1:1111174/1‑288 (MQ=255)
tcatcTGCTGCAGTTTCGGGTGAGCGGAGCGGTAGGTGATCGCGTCCTGGTGGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGGGCGTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGt < 2:34556/288‑1 (MQ=255)
catcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTTTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCa < 2:473908/289‑1 (MQ=255)
tcTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGt > 1:326353/1‑289 (MQ=255)
ctgctgCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGa > 1:584996/1‑209 (MQ=255)
gctgaACTTTGGGCTCCACGAGTCGTTAGGCGATCACTGCCGGATAGCGTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGTTGAGTACCCATAATCAGGCTTGCATGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGACTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGGCGAGACGACGCAGAATGTCAGTTAc < 2:1263814/289‑1 (MQ=255)
gcACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGCCAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTg < 2:57708/289‑1 (MQ=255)
cACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGt < 2:459747/249‑1 (MQ=255)
aCTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCt < 1:1015746/289‑1 (MQ=255)
tCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCAt > 1:894080/1‑288 (MQ=255)
tCGGATAAACGAAGCTGTGGGTGATCACTTCCGGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATc < 2:135113/289‑1 (MQ=255)
ggATAAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCg < 1:1360131/289‑1 (MQ=255)
atcacggAAGGTGTTGGTTTTCACTGCCTGTTGGCCTTTGGAGTGGAGC‑AG‑CTTTTTCCCGAGCTTGGGCACCAGGTCAGCTTCA‑CGGTGAGTACCCATAATCATGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGc < 2:1501005/282‑1 (MQ=255)
tCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCa < 1:1272585/288‑1 (MQ=255)
aCGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGATTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAActggc > 1:1307027/1‑211 (MQ=255)
aGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATatgat < 2:538919/288‑1 (MQ=255)
tGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCACTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATc < 1:686647/287‑1 (MQ=255)
gATCACTTCCTGATGGCCTTTGTCGTTGTGC‑AG‑CGTTTTCAGGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAgg < 2:896514/289‑1 (MQ=255)
tCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGACTGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCg > 1:647877/1‑289 (MQ=255)
tCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCg > 2:834167/1‑289 (MQ=255)
tCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCCAGACTTCTTCAACCAGTTCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCCCTTCGCAGCCGAGCCGCCGCAAAATCTCAGTTACCTGCTCATCCGCAATCTGTCGGCCTGTCAGGcc > 2:661085/1‑288 (MQ=255)
cACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGGGa > 1:298066/1‑289 (MQ=255)
cTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATc < 1:1624788/289‑1 (MQ=255)
tGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCCCGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGtt < 2:17287/289‑1 (MQ=255)
gATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGa > 1:392101/1‑129 (MQ=255)
gATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGa < 2:392101/129‑1 (MQ=255)
aGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCt < 1:1784231/289‑1 (MQ=255)
ggccttggtgTTGAGCGAG‑CGTATTCGCGCGCTTGAGCGACAGGTACGCTTCA‑CGGTGGGTCCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCt < 2:1704253/280‑1 (MQ=255)
ccTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTac > 1:1557905/1‑289 (MQ=255)
tGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttg > 1:1051851/1‑101 (MQ=255)
tGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTacgacg < 1:634350/289‑1 (MQ=255)
gAGC‑AGCCGTTTTC‑CACGCCTGAAGCGCAAGGCAGCCTCACCGGTGATTACCCCAATCCAGACTTGCCTTTACCGGCTCATCCGGGTTGTTGTTGTAGCCGTAAACCCGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGt < 2:196855/289‑1 (MQ=255)
gAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATatgat < 1:1475559/251‑1 (MQ=255)
gAGC‑AG‑CGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTacg < 1:754500/279‑1 (MQ=255)
agc‑ag‑cGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGa > 1:420823/1‑289 (MQ=255)
gc‑ag‑cGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGa < 1:1501924/288‑1 (MQ=255)
cGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCAt < 1:1039362/172‑1 (MQ=255)
cGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGtt > 1:927575/1‑289 (MQ=255)
ttttCACGCGCTTGAGCGACAGGTAAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGACTTTGCCTTCGGTCACTTCGCAGCCGAGACGACACAGAATGTCAGTTACCTGCTCATCCGCAATATATTGGCCGATCAGGCGTTCCAGTTTGCTACGACGTAGAGTGATGGtttc > 1:1565003/1‑287 (MQ=255)
tttCACGCGCTAGGGCGCCGGGTGAGCGTCA‑CGGTGAGTACCCATAACCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGCa < 2:1190349/289‑1 (MQ=255)
tCACGCGCTTGAGCGACAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAActgcc < 2:455459/161‑1 (MQ=255)
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ATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGC‑AG‑CGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCA‑CGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCGGCGCAACTGCCTGCCATTCGTCTTTGCCTTCGGTCACTTCGCAGCCGAGACGACGCAGAATGTCAGTTACCTGCTCATCCGCAATATGATGGCCGATCAGGCGATCCAGTTTGCTACGACGTAGAGTGATGGTTGCACGCTTCG > CP042583/1478129‑1478694
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A