Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,614,823 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,614,8230GC100.0% 935.6 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (179/210);  total (179/210)
*CP0425831,614,8240CG99.7% 918.5 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (179/208);  total (179/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,614,8250TA99.7% 928.6 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (179/207);  total (179/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 389 total aligned reads displayed.

GGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTAT  >  CP042583/1614547‑1615103
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
    gTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCg                                                                                                                                                                                                                                                                           >  1:2501205/1‑289 (MQ=255)
                   aGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACaa                                                                                                                                                                                                                                                            >  1:1343562/1‑289 (MQ=255)
                          aaTCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTc                                                                                                                                                                                                                                                     >  1:181842/1‑289 (MQ=255)
                                                gCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACagag                                                                                                                                                                                                                                <  1:2648956/287‑1 (MQ=255)
                                                 ccTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCa                                                                                                                                                                                                                              >  1:1211466/1‑288 (MQ=255)
                                                        aCTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                      <  1:932421/289‑1 (MQ=255)
                                                        aCTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                      <  1:900065/289‑1 (MQ=255)
                                                          tggagcaccagcaaCTCCACCCCCATCTGGTTGGTGTTGGCGGTACCGGAGAAAGTACATGTGCCCGGCGCATGGTACGTCGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCGTAGGCATAAAGCTGGCGAATACGCACTTGTTCTTTAGGTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGGGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  2:2698177/277‑1 (MQ=255)
                                                           gCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATc                                                                                                                                                                                                                                                          >  2:868739/1‑251 (MQ=255)
                                                              tCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCa                                                                                                                                                                                                                                                                        <  1:2888844/234‑1 (MQ=255)
                                                               ccccATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                               <  1:979762/289‑1 (MQ=255)
                                                               ccccATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                               <  2:2313532/289‑1 (MQ=255)
                                                               ccccATAAAACCCCCCACCCTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                               <  2:2668708/289‑1 (MQ=255)
                                                                 ccATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    >  2:276433/1‑282 (MQ=255)
                                                                    tAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                <  2:730557/252‑1 (MQ=255)
                                                                    tAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGCGACAATCTTGTCTCACA‑CACCGAGGAACAGCGCACCACCAAACATGTAATGGGa                                                                                                                                                                                                          >  1:2056091/1‑289 (MQ=255)
                                                                           cacccccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                <  2:1339097/245‑1 (MQ=255)
                                                                           caccaccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGccc                                                                                                                                                                                                    >  1:3058031/1‑288 (MQ=255)
                                                                                   tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGc                                                                                                                                                                                                                               >  2:1872687/1‑253 (MQ=255)
                                                                                   tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGc                                                                                                                                                                                                                               <  1:1872687/253‑1 (MQ=255)
                                                                                   tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                      <  2:1258209/262‑1 (MQ=255)
                                                                                   tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAAACTTGTCGCACA‑CACCGAGGAACAGAGCACCAACCAACATGTTATGGGACAGCCCCAccgcca                                                                                                                                                                                            >  2:759413/1‑287 (MQ=255)
                                                                                        ttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                                                                                                                                                                  >  2:2851576/1‑230 (MQ=255)
                                                                                        gtgggGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGGGCATGGTAAGGCGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                       <  2:1969737/287‑1 (MQ=255)
                                                                                         tggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACAt                                                                                                                                                                                     <  1:1187145/289‑1 (MQ=255)
                                                                                            tgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCg                                                                                                                                                                                   >  1:421226/1‑288 (MQ=255)
                                                                                                      acaggcgAAAGTACATGTTCCCGTCGCATGGTAAGACGCGGCGTCTGACTCACGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTcg                                                                                                                                                                        <  2:2501312/283‑1 (MQ=255)
                                                                                                      aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACagag                                                                                                                                                                                                                                >  2:252284/1‑233 (MQ=255)
                                                                                                      aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGAc                                                                                                                                                                                                         <  2:1444931/256‑1 (MQ=255)
                                                                                                      aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                       >  2:3210799/1‑274 (MQ=255)
                                                                                                      aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTcg                                                                                                                                                                        <  2:2909028/289‑1 (MQ=255)
                                                                                                      aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTc                                                                                                                                                                         >  1:276793/1‑288 (MQ=255)
                                                                                                          tAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                               <  2:67105/246‑1 (MQ=255)
                                                                                                          tAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCgg                                                                                                                                                                     >  1:1386035/1‑288 (MQ=255)
                                                                                                          tAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACACAGCACCATCAAACATGTTATGGGACAGCCCCACAGCCGCAGACACCGCTACCCCTTCGCgg                                                                                                                                                                     >  2:1188743/1‑288 (MQ=255)
                                                                                                               aGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGc                                                                                                                                                               >  1:816296/1‑289 (MQ=255)
                                                                                                                 tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAg                                                                                                                                                                                                                                        <  1:2296424/214‑1 (MQ=255)
                                                                                                                 tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCGCCATCAAACATGTTATGGGAGAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCa                                                                                                                                                              >  1:1974059/1‑288 (MQ=255)
                                                                                                                 tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGACCCATCAAACATGGTATGGGACAGCCCCCCCGCCGCAGACATCGCTCTCACTTCACGGCCTAGCa                                                                                                                                                              >  2:338143/1‑288 (MQ=255)
                                                                                                                  aCATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCa                                                                                                                                                              <  2:1211466/287‑1 (MQ=255)
                                                                                                                    aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  1:2855524/231‑1 (MQ=255)
                                                                                                                         cccGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCaa                                                                                                                                                                                                                       >  2:840623/1‑223 (MQ=255)
                                                                                                                           cGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCa                                                                                                                                                                                                  <  2:3104321/242‑1 (MQ=255)
                                                                                                                             gcgcATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTcg                                                                                                                                                                        >  2:331205/1‑266 (MQ=255)
                                                                                                                                          cgcggcttacgactcCAGTAAGGCCATGCGGTCCAATTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGcc                                                                                                                                      <  2:2356465/275‑1 (MQ=255)
                                                                                                                                          cgcgGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTGTCCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGccc                                                                                                                                     <  2:2027455/288‑1 (MQ=255)
                                                                                                                                           gcgGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCCATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGcc                                                                                                                                      >  2:1169838/1‑286 (MQ=255)
                                                                                                                                           gcgGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCAACAAACATGTTATGGGACAGCCCCCCCGCCGCCGACATCGCTAACACTTCGCGGCCTAGCAGCCACAAGTCCCTTCCATCCCGcccc                                                                                                                                    >  2:1921551/1‑288 (MQ=255)
                                                                                                                                             ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                 >  2:3167742/10‑289 (MQ=255)
                                                                                                                                             ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                 >  1:870838/10‑289 (MQ=255)
                                                                                                                                               cttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCa                                                                                                                                                                                                  <  1:2520830/215‑1 (MQ=255)
                                                                                                                                                            tAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                >  1:1256106/1‑164 (MQ=255)
                                                                                                                                                                 ccATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                <  2:2280516/159‑1 (MQ=255)
                                                                                                                                                                 ccATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                >  1:2280516/1‑159 (MQ=255)
                                                                                                                                                                   aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  1:3198460/184‑1 (MQ=255)
                                                                                                                                                                   aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCCCCGCCCCAGAATTCGCTATCACTCCGCGGCTAACCAGCGACAATCCCTTTCAACCTTGCCCTTGGTTGCCCCCACCACACACCCCCg                                                                                                           >  1:489504/1‑289 (MQ=255)
                                                                                                                                                                   aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACAccgccg                                                                                                           >  1:2942175/1‑289 (MQ=255)
                                                                                                                                                                   aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCg                                                                                                           >  1:2408530/1‑289 (MQ=255)
                                                                                                                                                                    tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca‑ca                                                                                                                                                                                                                                             >  2:404433/1‑158 (MQ=255)
                                                                                                                                                                    tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCgg                                                                                                          >  1:865306/1‑289 (MQ=255)
                                                                                                                                                                    tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCCATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACCACTCGCCgg                                                                                                          >  2:1547612/1‑289 (MQ=255)
                                                                                                                                                                           cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCa                                                                                                                                                                                          >  2:2427301/1‑202 (MQ=255)
                                                                                                                                                                           cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCa                                                                                                                                                                                          <  1:2427301/202‑1 (MQ=255)
                                                                                                                                                                           cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGa                                                                                                                             <  1:110954/263‑1 (MQ=255)
                                                                                                                                                                           cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGa                                                                                                                             >  2:110954/1‑263 (MQ=255)
                                                                                                                                                                              tttACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGGCAGACCCGGGACAATCTTGTCGCACC‑CACCGAGGGACAGAGCACCATCAAACATGTTATGGGACAGCACCACCGCCGCAGACATCGCTATCCATCGGCGGCATAGCAGCGACAACTCCATTCCATCCTCCCCATGGGTGACACCATCACCAACCGCCGGAACAcctcc                                                                                                 >  2:2970839/1‑288 (MQ=255)
                                                                                                                                                                                   cTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTCGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCaa                                                                                            >  1:3318482/1‑288 (MQ=255)
                                                                                                                                                                                   cTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTACCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGc                                                                                                                                                               <  1:147547/221‑1 (MQ=255)
                                                                                                                                                                                     tCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                       <  1:629098/195‑1 (MQ=255)
                                                                                                                                                                                     tCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                       >  2:629098/1‑195 (MQ=255)
                                                                                                                                                                                      cGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                >  1:752668/1‑138 (MQ=255)
                                                                                                                                                                                      cGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                                                                                                                                                                  <  2:92691/136‑1 (MQ=255)
                                                                                                                                                                                         cATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACtt                                                                                                                                                                          <  1:257983/204‑1 (MQ=255)
                                                                                                                                                                                                 ctgccgaaaCGCACTTTTTCCTTTATTGGCAAACCCCTTGGCCACCGTCCCAG‑CCGCACAAACACCCCACGCAAAAGACCAAACCGCCAGGCCTCCAACGGCCAGCCCCGGAAAAACTTGTCCCAAACCCCCGGGGACCAGA‑CCCCATCAAACATGTTTAGGGGCAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCAt                                                                             <  2:489504/281‑1 (MQ=255)
                                                                                                                                                                                                   gCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                          >  1:2675231/1‑207 (MQ=255)
                                                                                                                                                                                                   gCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACAGGTTATGGGACAGCCCCCCCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCCTTCCAACCTGCCCCTGGGCGACACCATCACCCAACGCCGGAAACCCCCCCGCAACCTCACCAACCGCAtt                                                                            >  2:1600932/1‑288 (MQ=255)
                                                                                                                                                                                                           gCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATg                                                                   <  1:666487/289‑1 (MQ=255)
                                                                                                                                                                                                             aCTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCa                                                                 >  1:1926459/1‑289 (MQ=255)
                                                                                                                                                                                                               tttttCTTGAGTTGGCAAACCGCTT‑GCCATCGGTCCGGACGGCACAAGCCCCGCAGGCAAATGACCAAACGACAGGGCGGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCCTCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                          <  2:1728037/198‑4 (MQ=255)
                                                                                                                                                                                                                  ttCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCt                                                            <  1:394669/289‑1 (MQ=255)
                                                                                                                                                                                                                          ttGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAAt                                                    <  1:1169838/289‑1 (MQ=255)
                                                                                                                                                                                                                          ttGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAAt                                                    <  1:102184/289‑1 (MQ=255)
                                                                                                                                                                                                                            ggCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGa                                                  <  1:3273104/289‑1 (MQ=255)
                                                                                                                                                                                                                            ggCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGa                                                  <  1:1703063/289‑1 (MQ=255)
                                                                                                                                                                                                                               aaaCCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCa                                                                                                                                                                                                  <  1:1956101/142‑1 (MQ=255)
                                                                                                                                                                                                                                    gCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                          <  1:1594142/289‑1 (MQ=255)
                                                                                                                                                                                                                                    gCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                          <  1:2533181/289‑1 (MQ=255)
                                                                                                                                                                                                                                    gCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                          <  2:2408530/289‑1 (MQ=255)
                                                                                                                                                                                                                                         gCCATCGGTCCAGACGGCTCAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAgt                                      <  2:2587795/289‑1 (MQ=255)
                                                                                                                                                                                                                                         gCCAACCGTCCCGAAGGCACAAACACCGCAGGCAAATGACCAAACGACATGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAgt                                      <  2:2876563/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccgACGGCACAAACACCACCAGCAAATGACCAACCGACAGGGCTGCCATAGTCAAACCCGGGACAATCTTGTCGGACA‑CCCCGAGGAACAGGGCGCCATCAAACATGTTATGGGACAGCCCCACCGCCTCATACATCGCTATCACTTCGCGGCTTAGCAGCGACAAGTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAgg                            <  2:1682618/287‑1 (MQ=255)
                                                                                                                                                                                                                                                          cacaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAacac                                                                                                     >  1:705434/1‑209 (MQ=255)
                                                                                                                                                                                                                                                           acaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGAc                                                                                                                                                                                                         >  2:195054/1‑108 (MQ=255)
                                                                                                                                                                                                                                                           acaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTgc                     >  1:236983/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               acacCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATc                                                                                                                                           >  1:3155420/1‑166 (MQ=255)
                                                                                                                                                                                                                                                                   cGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGc            >  2:2155890/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    gCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGt                                                                                                                               <  1:1299082/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCa           <  1:1918869/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt          <  1:1547612/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTtat  <  1:2155890/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
GGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTT‑GCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACA‑CACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTAT  >  CP042583/1614547‑1615103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A